Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
EPHA3P29320 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
EPHA3P29320 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
EPHA3P29320 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
EPHA3P29320 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC14.79□□□□□ -0.04
EPHA3P29320 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
EPHA3P29320 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
EPHA3P29320 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
EPHA3P29320 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC14.79□□□□□ -0.04
EPHA3P29320 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
EPHA3P29320 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
EPHA3P29320 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.79□□□□□ -0.04
EPHA3P29320 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC14.79□□□□□ -0.04
EPHA3P29320 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
EPHA3P29320 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
EPHA3P29320 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
EPHA3P29320 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
EPHA3P29320 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
EPHA3P29320 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
EPHA3P29320 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
EPHA3P29320 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
EPHA3P29320 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
EPHA3P29320 STOM-202ENST00000347359 870 ntTSL 2 BASIC14.79□□□□□ -0.04
EPHA3P29320 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
EPHA3P29320 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
EPHA3P29320 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
EPHA3P29320 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
EPHA3P29320 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
EPHA3P29320 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
EPHA3P29320 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
EPHA3P29320 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
EPHA3P29320 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
EPHA3P29320 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
EPHA3P29320 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC14.79□□□□□ -0.04
EPHA3P29320 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC14.79□□□□□ -0.04
EPHA3P29320 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC14.79□□□□□ -0.04
EPHA3P29320 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC14.79□□□□□ -0.04
EPHA3P29320 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC14.79□□□□□ -0.04
EPHA3P29320 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC14.79□□□□□ -0.04
EPHA3P29320 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC14.79□□□□□ -0.04
EPHA3P29320 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC14.79□□□□□ -0.04
EPHA3P29320 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC14.79□□□□□ -0.04
EPHA3P29320 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
EPHA3P29320 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
EPHA3P29320 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC14.79□□□□□ -0.04
EPHA3P29320 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC14.79□□□□□ -0.04
EPHA3P29320 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.79□□□□□ -0.04
EPHA3P29320 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
EPHA3P29320 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC14.79□□□□□ -0.04
EPHA3P29320 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC14.79□□□□□ -0.04
EPHA3P29320 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
EPHA3P29320 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
EPHA3P29320 AC011474.4-201ENST00000623523 2076 ntBASIC14.79□□□□□ -0.04
EPHA3P29320 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
EPHA3P29320 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
EPHA3P29320 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC14.79□□□□□ -0.04
EPHA3P29320 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
EPHA3P29320 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
EPHA3P29320 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
EPHA3P29320 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
EPHA3P29320 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC14.79□□□□□ -0.04
EPHA3P29320 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
EPHA3P29320 MST1P2-201ENST00000457982 2291 ntBASIC14.78□□□□□ -0.04
EPHA3P29320 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
EPHA3P29320 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC14.78□□□□□ -0.04
EPHA3P29320 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
EPHA3P29320 C8orf49-201ENST00000525043 1968 ntBASIC14.78□□□□□ -0.04
EPHA3P29320 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
EPHA3P29320 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC14.78□□□□□ -0.04
EPHA3P29320 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC14.78□□□□□ -0.04
EPHA3P29320 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
EPHA3P29320 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
EPHA3P29320 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
EPHA3P29320 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
EPHA3P29320 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
EPHA3P29320 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
EPHA3P29320 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
EPHA3P29320 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
EPHA3P29320 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
EPHA3P29320 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
EPHA3P29320 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
EPHA3P29320 TPT1P11-201ENST00000458482 498 ntBASIC14.78□□□□□ -0.04
EPHA3P29320 SERBP1P3-201ENST00000459980 809 ntBASIC14.78□□□□□ -0.04
EPHA3P29320 POLD2P1-201ENST00000511220 997 ntBASIC14.78□□□□□ -0.04
EPHA3P29320 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC14.78□□□□□ -0.04
EPHA3P29320 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC14.78□□□□□ -0.04
EPHA3P29320 SAMD11P1-201ENST00000571429 661 ntBASIC14.78□□□□□ -0.04
EPHA3P29320 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
EPHA3P29320 MIR6080-201ENST00000617359 66 ntBASIC14.78□□□□□ -0.04
EPHA3P29320 GPR39-203ENST00000622084 900 ntTSL 5 BASIC14.78□□□□□ -0.04
EPHA3P29320 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
EPHA3P29320 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC14.78□□□□□ -0.04
EPHA3P29320 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
EPHA3P29320 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
EPHA3P29320 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
EPHA3P29320 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
EPHA3P29320 CETN4P-206ENST00000642099 2168 ntBASIC14.78□□□□□ -0.04
EPHA3P29320 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
EPHA3P29320 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC14.78□□□□□ -0.04
EPHA3P29320 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms