RNA–Protein interactions for RNA: ENST00000394810.2

SYNPO2L-202, Transcript of synaptopodin 2 like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2L, Length 4,921 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2L-202ENST00000394810 NISCHQ9Y2I1 1504 aa28.52■■■□□ 2.16
SYNPO2L-202ENST00000394810 DCAF8L2P0C7V8 631 aa26.97■■□□□ 1.91
SYNPO2L-202ENST00000394810 SHROOM4Q9ULL8 1493 aa25.49■■□□□ 1.67
SYNPO2L-202ENST00000394810 SUPT5HO00267 1087 aaKnown RBP25.4■■□□□ 1.66
SYNPO2L-202ENST00000394810 ABCC9O60706 1549 aa24.22■■□□□ 1.47
SYNPO2L-202ENST00000394810 CCDC180Q9P1Z9 1646 aa24.02■■□□□ 1.44
SYNPO2L-202ENST00000394810 EHMT2Q96KQ7 1210 aa23.83■■□□□ 1.41
SYNPO2L-202ENST00000394810 TRIM41Q8WV44 630 aa23.78■■□□□ 1.4
SYNPO2L-202ENST00000394810 FAM9AQ8IZU1 332 aaPredicted RBP23.73■■□□□ 1.39
SYNPO2L-202ENST00000394810 ZCCHC6Q5VYS8 1495 aaKnown RBP23.7■■□□□ 1.38
SYNPO2L-202ENST00000394810 PABPN1Q86U42 306 aaKnown RBP eCLIP23.56■■□□□ 1.36
SYNPO2L-202ENST00000394810 APLP2Q06481 763 aa23.54■■□□□ 1.36
SYNPO2L-202ENST00000394810 UBTFP17480 764 aaKnown RBP23.22■■□□□ 1.31
SYNPO2L-202ENST00000394810 CHIC1Q5VXU3 224 aa23.2■■□□□ 1.31
SYNPO2L-202ENST00000394810 SCRIBQ14160 1630 aa23.19■■□□□ 1.3
SYNPO2L-202ENST00000394810 RB1CC1Q8TDY2 1594 aa23.12■■□□□ 1.29
SYNPO2L-202ENST00000394810 RANGAP1P46060 587 aaPredicted RBP23.1■■□□□ 1.29
SYNPO2L-202ENST00000394810 NACADO15069 1562 aa23.08■■□□□ 1.28
SYNPO2L-202ENST00000394810 DCAF1Q9Y4B6 1507 aa22.99■■□□□ 1.27
SYNPO2L-202ENST00000394810 TTBK1Q5TCY1 1321 aaPredicted RBP22.92■■□□□ 1.26
SYNPO2L-202ENST00000394810 PCGF6Q9BYE7 350 aa22.9■■□□□ 1.26
SYNPO2L-202ENST00000394810 ATP1B4Q9UN42 357 aaPredicted RBP22.87■■□□□ 1.25
SYNPO2L-202ENST00000394810 LOC105371045A0A1W2PR82 267 aa22.72■■□□□ 1.23
SYNPO2L-202ENST00000394810 MYO15BQ96JP2 1530 aa22.55■■□□□ 1.2
SYNPO2L-202ENST00000394810 ZEB1P37275 1124 aaPredicted RBP22.53■■□□□ 1.2
SYNPO2L-202ENST00000394810 RSF1Q96T23 1441 aaPredicted RBP22.51■■□□□ 1.19
SYNPO2L-202ENST00000394810 TRIM26Q12899 539 aaPredicted RBP22.47■■□□□ 1.19
SYNPO2L-202ENST00000394810 CCER1Q8TC90 406 aaPredicted RBP22.47■■□□□ 1.19
SYNPO2L-202ENST00000394810 PPARGC1BQ86YN6 1023 aaKnown RBP22.43■■□□□ 1.18
SYNPO2L-202ENST00000394810 BAZ1AQ9NRL2 1556 aaPredicted RBP22.34■■□□□ 1.17
SYNPO2L-202ENST00000394810 CSRNP3Q8WYN3 585 aa22.33■■□□□ 1.17
SYNPO2L-202ENST00000394810 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.33■■□□□ 1.17
SYNPO2L-202ENST00000394810 HNRNPUL2Q1KMD3 747 aaKnown RBP22.33■■□□□ 1.17
SYNPO2L-202ENST00000394810 BAZ1BQ9UIG0 1483 aaKnown RBP22.23■■□□□ 1.15
SYNPO2L-202ENST00000394810 CECR2Q9BXF3 1484 aa22.22■■□□□ 1.15
SYNPO2L-202ENST00000394810 ITGAEP38570 1179 aa22.09■■□□□ 1.13
SYNPO2L-202ENST00000394810 FBLN2P98095 1184 aa22.08■■□□□ 1.12
SYNPO2L-202ENST00000394810 MROH2BQ7Z745 1585 aa21.99■■□□□ 1.11
SYNPO2L-202ENST00000394810 MYT1LQ9UL68 1186 aa21.92■■□□□ 1.1
SYNPO2L-202ENST00000394810 SMARCA2P51531 1590 aa21.9■■□□□ 1.1
SYNPO2L-202ENST00000394810 WRNQ14191 1432 aaPredicted RBP eCLIP21.9■■□□□ 1.1
SYNPO2L-202ENST00000394810 EEA1Q15075 1411 aa21.88■■□□□ 1.09
SYNPO2L-202ENST00000394810 FAM50AQ14320 339 aaKnown RBP21.84■■□□□ 1.09
SYNPO2L-202ENST00000394810 P3H3Q8IVL6 736 aa21.83■■□□□ 1.08
SYNPO2L-202ENST00000394810 HRCP23327 699 aa21.82■■□□□ 1.08
SYNPO2L-202ENST00000394810 CCDC88BA6NC98 1476 aa21.74■■□□□ 1.07
SYNPO2L-202ENST00000394810 TOP2AP11388 1531 aaKnown RBP21.69■■□□□ 1.06
SYNPO2L-202ENST00000394810 CDK11AQ9UQ88 783 aaPredicted RBP21.69■■□□□ 1.06
SYNPO2L-202ENST00000394810 PELP1Q8IZL8 1130 aaKnown RBP21.67■■□□□ 1.06
SYNPO2L-202ENST00000394810 KIF27Q86VH2 1401 aa21.67■■□□□ 1.06
SYNPO2L-202ENST00000394810 SMARCA4P51532 1647 aa21.65■■□□□ 1.06
SYNPO2L-202ENST00000394810 WIZO95785 1651 aa21.65■■□□□ 1.06
SYNPO2L-202ENST00000394810 ATAD2BQ9ULI0 1458 aa21.65■■□□□ 1.06
SYNPO2L-202ENST00000394810 CENPBP07199 599 aaPredicted RBP21.62■■□□□ 1.05
SYNPO2L-202ENST00000394810 CHMP7Q8WUX9 453 aaPredicted RBP21.61■■□□□ 1.05
SYNPO2L-202ENST00000394810 GOLGA3Q08378 1498 aa21.61■■□□□ 1.05
SYNPO2L-202ENST00000394810 ERCC6Q03468 1493 aa21.56■■□□□ 1.04
SYNPO2L-202ENST00000394810 CLIP1P30622 1438 aa21.56■■□□□ 1.04
SYNPO2L-202ENST00000394810 TRIM52Q96A61 297 aa21.55■■□□□ 1.04
SYNPO2L-202ENST00000394810 ARID3CA6NKF2 412 aa21.54■■□□□ 1.04
SYNPO2L-202ENST00000394810 CEP164Q9UPV0 1460 aa21.52■■□□□ 1.03
SYNPO2L-202ENST00000394810 PDS5BQ9NTI5 1447 aa21.51■■□□□ 1.03
SYNPO2L-202ENST00000394810 CADPSQ9ULU8 1353 aa21.47■■□□□ 1.03
SYNPO2L-202ENST00000394810 TNIKQ9UKE5 1360 aa21.47■■□□□ 1.03
SYNPO2L-202ENST00000394810 CEP162Q5TB80 1403 aa21.43■■□□□ 1.02
SYNPO2L-202ENST00000394810 NPM1P06748 294 aaKnown RBP eCLIP21.38■■□□□ 1.01
SYNPO2L-202ENST00000394810 CUX2O14529 1486 aa21.38■■□□□ 1.01
SYNPO2L-202ENST00000394810 ZNF777Q9ULD5 760 aaPredicted RBP21.36■■□□□ 1.01
SYNPO2L-202ENST00000394810 ABCC8Q09428 1581 aa21.36■■□□□ 1.01
SYNPO2L-202ENST00000394810 SOGA1O94964 1423 aa21.35■■□□□ 1.01
SYNPO2L-202ENST00000394810 CARMIL1Q5VZK9 1371 aa21.32■■□□□ 1
SYNPO2L-202ENST00000394810 NCAPD3P42695 1498 aa21.32■■□□□ 1
SYNPO2L-202ENST00000394810 MTUS2Q5JR59 1369 aa21.32■■□□□ 1
SYNPO2L-202ENST00000394810 NEUROD1Q13562 356 aa21.32■■□□□ 1
SYNPO2L-202ENST00000394810 POLR3GLQ9BT43 218 aa21.29■■□□□ 1
SYNPO2L-202ENST00000394810 EIF4G1Q04637 1599 aaKnown RBP21.28■■□□□ 1
SYNPO2L-202ENST00000394810 YTHDC1Q96MU7 727 aaKnown RBP21.22■□□□□ 0.99
SYNPO2L-202ENST00000394810 PLEKHD1A6NEE1 506 aa21.15■□□□□ 0.98
SYNPO2L-202ENST00000394810 MYT1Q01538 1121 aa21.15■□□□□ 0.98
SYNPO2L-202ENST00000394810 FANCD2Q9BXW9 1451 aa21.13■□□□□ 0.97
SYNPO2L-202ENST00000394810 NEFLP07196 543 aa21.12■□□□□ 0.97
SYNPO2L-202ENST00000394810 TDRD9Q8NDG6 1382 aaKnown RBP21.12■□□□□ 0.97
SYNPO2L-202ENST00000394810 DIEXFQ68CQ4 756 aaKnown RBP21.11■□□□□ 0.97
SYNPO2L-202ENST00000394810 FHAD1B1AJZ9 1412 aa21.11■□□□□ 0.97
SYNPO2L-202ENST00000394810 TSPY4P0CV99 314 aa21.1■□□□□ 0.97
SYNPO2L-202ENST00000394810 TSPY10P0CW01 314 aa21.1■□□□□ 0.97
SYNPO2L-202ENST00000394810 ZNF326Q5BKZ1 582 aaKnown RBP21.05■□□□□ 0.96
SYNPO2L-202ENST00000394810 BICRAQ9NZM4 1560 aa21.04■□□□□ 0.96
SYNPO2L-202ENST00000394810 CHIC2Q9UKJ5 165 aa21.03■□□□□ 0.96
SYNPO2L-202ENST00000394810 HMGXB3Q12766 1538 aa20.99■□□□□ 0.95
SYNPO2L-202ENST00000394810 ZNF316A6NFI3 1004 aaPredicted RBP20.99■□□□□ 0.95
SYNPO2L-202ENST00000394810 ACIN1Q9UKV3 1341 aaKnown RBP20.97■□□□□ 0.95
SYNPO2L-202ENST00000394810 RAPGEF2Q9Y4G8 1499 aa20.96■□□□□ 0.95
SYNPO2L-202ENST00000394810 VPS8Q8N3P4 1428 aa20.95■□□□□ 0.94
SYNPO2L-202ENST00000394810 KCNH8Q96L42 1107 aa20.95■□□□□ 0.94
SYNPO2L-202ENST00000394810 TONSLQ96HA7 1378 aa20.94■□□□□ 0.94
SYNPO2L-202ENST00000394810 CNGB1Q14028 1251 aaPredicted RBP20.93■□□□□ 0.94
SYNPO2L-202ENST00000394810 SLC4A1APQ9BWU0 796 aaKnown RBP20.93■□□□□ 0.94
SYNPO2L-202ENST00000394810 ESF1Q9H501 851 aaKnown RBP20.92■□□□□ 0.94
SYNPO2L-202ENST00000394810 CFDP1Q9UEE9 299 aaPredicted RBP20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms