RNA–Protein interactions for RNA: ENST00000373017.5

LCN2-203, Transcript of lipocalin 2, humanhuman

APPRIS P2 TSL 5 BASIC

Gene LCN2, Length 848 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-203ENST00000373017 NISCHQ9Y2I1 1504 aa41.24■■■■■ 4.19
LCN2-203ENST00000373017 CCDC180Q9P1Z9 1646 aa36.9■■■■□ 3.5
LCN2-203ENST00000373017 ABCC9O60706 1549 aa36.49■■■■□ 3.43
LCN2-203ENST00000373017 RB1CC1Q8TDY2 1594 aa34.87■■■■□ 3.17
LCN2-203ENST00000373017 NACADO15069 1562 aa34.72■■■■□ 3.15
LCN2-203ENST00000373017 DCAF8L2P0C7V8 631 aa34.51■■■■□ 3.12
LCN2-203ENST00000373017 MYO15BQ96JP2 1530 aa34.35■■■■□ 3.09
LCN2-203ENST00000373017 UNC13AQ9UPW8 1703 aa34.31■■■■□ 3.08
LCN2-203ENST00000373017 ZCCHC6Q5VYS8 1495 aaKnown RBP34.28■■■■□ 3.08
LCN2-203ENST00000373017 DCAF1Q9Y4B6 1507 aa34.07■■■■□ 3.04
LCN2-203ENST00000373017 PABPN1Q86U42 306 aaKnown RBP eCLIP33.98■■■■□ 3.03
LCN2-203ENST00000373017 BICRAQ9NZM4 1560 aa33.96■■■■□ 3.03
LCN2-203ENST00000373017 DNAJC5BQ9UF47 199 aa33.92■■■■□ 3.02
LCN2-203ENST00000373017 SCRIBQ14160 1630 aa33.65■■■□□ 2.98
LCN2-203ENST00000373017 SHROOM4Q9ULL8 1493 aa33.38■■■□□ 2.93
LCN2-203ENST00000373017 EIF4G1Q04637 1599 aaKnown RBP33.04■■■□□ 2.88
LCN2-203ENST00000373017 CC2D2AQ9P2K1 1620 aa33.02■■■□□ 2.88
LCN2-203ENST00000373017 CECR2Q9BXF3 1484 aa32.8■■■□□ 2.84
LCN2-203ENST00000373017 SMARCA4P51532 1647 aa32.14■■■□□ 2.74
LCN2-203ENST00000373017 NCAPD3P42695 1498 aa32.03■■■□□ 2.72
LCN2-203ENST00000373017 ATAD2BQ9ULI0 1458 aa32.02■■■□□ 2.72
LCN2-203ENST00000373017 BAZ1AQ9NRL2 1556 aaPredicted RBP31.97■■■□□ 2.71
LCN2-203ENST00000373017 SMARCA2P51531 1590 aa31.93■■■□□ 2.7
LCN2-203ENST00000373017 HMGXB3Q12766 1538 aa31.88■■■□□ 2.69
LCN2-203ENST00000373017 MROH2BQ7Z745 1585 aa31.82■■■□□ 2.68
LCN2-203ENST00000373017 PEG3Q9GZU2 1588 aa31.81■■■□□ 2.68
LCN2-203ENST00000373017 BAZ1BQ9UIG0 1483 aaKnown RBP31.71■■■□□ 2.67
LCN2-203ENST00000373017 WIZO95785 1651 aa31.51■■■□□ 2.63
LCN2-203ENST00000373017 NESP48681 1621 aa31.5■■■□□ 2.63
LCN2-203ENST00000373017 ERCC6Q03468 1493 aa31.4■■■□□ 2.62
LCN2-203ENST00000373017 LAMC3Q9Y6N6 1575 aa31.29■■■□□ 2.6
LCN2-203ENST00000373017 CUX2O14529 1486 aa31.25■■■□□ 2.59
LCN2-203ENST00000373017 RSF1Q96T23 1441 aaPredicted RBP31.24■■■□□ 2.59
LCN2-203ENST00000373017 KIF21AQ7Z4S6 1674 aa31.18■■■□□ 2.58
LCN2-203ENST00000373017 THOC2Q8NI27 1593 aaKnown RBP31.14■■■□□ 2.58
LCN2-203ENST00000373017 TOP2AP11388 1531 aaKnown RBP31.06■■■□□ 2.56
LCN2-203ENST00000373017 CADPSQ9ULU8 1353 aa31.05■■■□□ 2.56
LCN2-203ENST00000373017 PDS5BQ9NTI5 1447 aa31■■■□□ 2.55
LCN2-203ENST00000373017 CFTRP13569 1480 aa30.82■■■□□ 2.53
LCN2-203ENST00000373017 MRC2Q9UBG0 1479 aa30.78■■■□□ 2.52
LCN2-203ENST00000373017 DNAJC5Q9H3Z4 198 aa30.78■■■□□ 2.52
LCN2-203ENST00000373017 WDR62O43379 1518 aa30.74■■■□□ 2.51
LCN2-203ENST00000373017 FANCD2Q9BXW9 1451 aa30.74■■■□□ 2.51
LCN2-203ENST00000373017 CEP164Q9UPV0 1460 aa30.73■■■□□ 2.51
LCN2-203ENST00000373017 PRDM2Q13029 1718 aa30.7■■■□□ 2.51
LCN2-203ENST00000373017 CCDC88BA6NC98 1476 aa30.7■■■□□ 2.5
LCN2-203ENST00000373017 URB2Q14146 1524 aaKnown RBP30.52■■■□□ 2.48
LCN2-203ENST00000373017 TOPBP1Q92547 1522 aa30.23■■■□□ 2.43
LCN2-203ENST00000373017 DNMBPQ6XZF7 1577 aa30.15■■■□□ 2.42
LCN2-203ENST00000373017 ABCC8Q09428 1581 aa30.09■■■□□ 2.41
LCN2-203ENST00000373017 ZNF608Q9ULD9 1512 aaPredicted RBP30.08■■■□□ 2.41
LCN2-203ENST00000373017 IFT140Q96RY7 1462 aa30.08■■■□□ 2.41
LCN2-203ENST00000373017 SUPT5HO00267 1087 aaKnown RBP30.06■■■□□ 2.4
LCN2-203ENST00000373017 TARBP1Q13395 1621 aaKnown RBP30■■■□□ 2.39
LCN2-203ENST00000373017 EIF4G3O43432 1585 aaKnown RBP29.96■■■□□ 2.39
LCN2-203ENST00000373017 POLA1P09884 1462 aaPredicted RBP29.94■■■□□ 2.38
LCN2-203ENST00000373017 CUX1P39880 1505 aa29.88■■■□□ 2.37
LCN2-203ENST00000373017 RAD54L2Q9Y4B4 1467 aa29.84■■■□□ 2.37
LCN2-203ENST00000373017 AQRO60306 1485 aaKnown RBP eCLIP29.81■■■□□ 2.36
LCN2-203ENST00000373017 FGD5Q6ZNL6 1462 aa29.8■■■□□ 2.36
LCN2-203ENST00000373017 OSCARQ8IYS5 282 aa29.8■■■□□ 2.36
LCN2-203ENST00000373017 SOGA1O94964 1423 aa29.74■■■□□ 2.35
LCN2-203ENST00000373017 CHD1O14646 1710 aa29.72■■■□□ 2.35
LCN2-203ENST00000373017 WDR97A6NE52 1622 aa29.7■■■□□ 2.34
LCN2-203ENST00000373017 TDRD9Q8NDG6 1382 aaKnown RBP29.66■■■□□ 2.34
LCN2-203ENST00000373017 TRIM41Q8WV44 630 aa29.57■■■□□ 2.32
LCN2-203ENST00000373017 RIMBP3CA6NJZ7 1639 aa29.56■■■□□ 2.32
LCN2-203ENST00000373017 RIMBP3BA6NNM3 1639 aa29.56■■■□□ 2.32
LCN2-203ENST00000373017 RIMBP3Q9UFD9 1639 aa29.56■■■□□ 2.32
LCN2-203ENST00000373017 SNAPC4Q5SXM2 1469 aa29.53■■■□□ 2.32
LCN2-203ENST00000373017 BIVM-ERCC5R4GMW8 1640 aa29.53■■■□□ 2.32
LCN2-203ENST00000373017 PBRM1Q86U86 1689 aa29.52■■■□□ 2.32
LCN2-203ENST00000373017 SYNJ1O43426 1573 aa29.51■■■□□ 2.31
LCN2-203ENST00000373017 TOP2BQ02880 1626 aa29.49■■■□□ 2.31
LCN2-203ENST00000373017 ABCA10Q8WWZ4 1543 aa29.48■■■□□ 2.31
LCN2-203ENST00000373017 ABCA5Q8WWZ7 1642 aa29.47■■■□□ 2.31
LCN2-203ENST00000373017 ARHGEF11O15085 1522 aa29.45■■■□□ 2.31
LCN2-203ENST00000373017 GRIN2BQ13224 1484 aa29.45■■■□□ 2.31
LCN2-203ENST00000373017 FBLN2P98095 1184 aa29.44■■■□□ 2.3
LCN2-203ENST00000373017 WRNQ14191 1432 aaPredicted RBP eCLIP29.44■■■□□ 2.3
LCN2-203ENST00000373017 MAGI1Q96QZ7 1491 aaPredicted RBP29.43■■■□□ 2.3
LCN2-203ENST00000373017 GAPVD1Q14C86 1478 aa29.42■■■□□ 2.3
LCN2-203ENST00000373017 SYNJ2O15056 1496 aa29.33■■■□□ 2.29
LCN2-203ENST00000373017 CLASP1Q7Z460 1538 aa29.33■■■□□ 2.29
LCN2-203ENST00000373017 CHMP7Q8WUX9 453 aaPredicted RBP29.27■■■□□ 2.28
LCN2-203ENST00000373017 ARAP1Q96P48 1450 aa29.21■■■□□ 2.27
LCN2-203ENST00000373017 ADAMTS12P58397 1594 aa29.21■■■□□ 2.27
LCN2-203ENST00000373017 GRIN2AQ12879 1464 aa29.11■■■□□ 2.25
LCN2-203ENST00000373017 CYB5RLQ6IPT4 315 aa29.11■■■□□ 2.25
LCN2-203ENST00000373017 ERICH3Q5RHP9 1530 aa29.1■■■□□ 2.25
LCN2-203ENST00000373017 CEP170Q5SW79 1584 aa29.06■■■□□ 2.24
LCN2-203ENST00000373017 FHAD1B1AJZ9 1412 aa29.03■■■□□ 2.24
LCN2-203ENST00000373017 NUP160Q12769 1436 aa29.01■■■□□ 2.23
LCN2-203ENST00000373017 ERCC6L2Q5T890 1561 aa28.94■■■□□ 2.22
LCN2-203ENST00000373017 SHROOM2Q13796 1616 aa28.91■■■□□ 2.22
LCN2-203ENST00000373017 KIF27Q86VH2 1401 aa28.81■■■□□ 2.2
LCN2-203ENST00000373017 RUSC2Q8N2Y8 1516 aa28.79■■■□□ 2.2
LCN2-203ENST00000373017 IGF1RP08069 1367 aa28.79■■■□□ 2.2
LCN2-203ENST00000373017 CUL7Q14999 1698 aa28.79■■■□□ 2.2
LCN2-203ENST00000373017 PRG4Q92954 1404 aaPredicted RBP28.66■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms