Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC68Q9H2F9 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC68Q9H2F9 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC68Q9H2F9 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCDC68Q9H2F9 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC68Q9H2F9 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.29■□□□□ 0.04
CCDC68Q9H2F9 LINC00528-201ENST00000600723 2160 ntBASIC15.29■□□□□ 0.04
CCDC68Q9H2F9 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CCDC68Q9H2F9 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CCDC68Q9H2F9 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC68Q9H2F9 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC68Q9H2F9 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC15.29■□□□□ 0.04
CCDC68Q9H2F9 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC68Q9H2F9 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC68Q9H2F9 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC15.29■□□□□ 0.04
CCDC68Q9H2F9 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC68Q9H2F9 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CCDC68Q9H2F9 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC68Q9H2F9 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC15.29■□□□□ 0.04
CCDC68Q9H2F9 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC68Q9H2F9 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
CCDC68Q9H2F9 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC68Q9H2F9 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
CCDC68Q9H2F9 PMS2P2-201ENST00000425039 1128 ntBASIC15.29■□□□□ 0.04
CCDC68Q9H2F9 HNRNPA1P40-201ENST00000426371 1278 ntBASIC15.29■□□□□ 0.04
CCDC68Q9H2F9 RASL12-203ENST00000434605 982 ntTSL 2 BASIC15.29■□□□□ 0.04
CCDC68Q9H2F9 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC68Q9H2F9 AC004066.1-201ENST00000502488 802 ntBASIC15.29■□□□□ 0.04
CCDC68Q9H2F9 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CCDC68Q9H2F9 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC15.29■□□□□ 0.04
CCDC68Q9H2F9 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC15.29■□□□□ 0.04
CCDC68Q9H2F9 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC15.29■□□□□ 0.04
CCDC68Q9H2F9 AC104794.3-201ENST00000566840 1248 ntBASIC15.29■□□□□ 0.04
CCDC68Q9H2F9 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC15.29■□□□□ 0.04
CCDC68Q9H2F9 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC68Q9H2F9 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC68Q9H2F9 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC68Q9H2F9 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CCDC68Q9H2F9 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC68Q9H2F9 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC68Q9H2F9 AC013726.1-201ENST00000563747 2285 ntBASIC15.29■□□□□ 0.04
CCDC68Q9H2F9 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC68Q9H2F9 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC68Q9H2F9 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC68Q9H2F9 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC68Q9H2F9 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC68Q9H2F9 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC68Q9H2F9 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CCDC68Q9H2F9 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CCDC68Q9H2F9 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
CCDC68Q9H2F9 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCDC68Q9H2F9 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC68Q9H2F9 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC68Q9H2F9 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC68Q9H2F9 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC68Q9H2F9 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC68Q9H2F9 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC15.28■□□□□ 0.04
CCDC68Q9H2F9 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CCDC68Q9H2F9 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC68Q9H2F9 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC68Q9H2F9 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC68Q9H2F9 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC68Q9H2F9 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC15.28■□□□□ 0.04
CCDC68Q9H2F9 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC68Q9H2F9 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CCDC68Q9H2F9 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC68Q9H2F9 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC68Q9H2F9 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CCDC68Q9H2F9 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CCDC68Q9H2F9 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC68Q9H2F9 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC68Q9H2F9 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC15.28■□□□□ 0.04
CCDC68Q9H2F9 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC68Q9H2F9 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC68Q9H2F9 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC68Q9H2F9 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC15.28■□□□□ 0.04
CCDC68Q9H2F9 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC15.28■□□□□ 0.04
CCDC68Q9H2F9 AC092183.1-201ENST00000469884 875 ntBASIC15.28■□□□□ 0.04
CCDC68Q9H2F9 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC15.28■□□□□ 0.04
CCDC68Q9H2F9 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC15.28■□□□□ 0.04
CCDC68Q9H2F9 RNA5SP421-201ENST00000516864 134 ntBASIC15.28■□□□□ 0.04
CCDC68Q9H2F9 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC15.28■□□□□ 0.04
CCDC68Q9H2F9 RFPL4AP1-201ENST00000530883 850 ntBASIC15.28■□□□□ 0.04
CCDC68Q9H2F9 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC15.28■□□□□ 0.04
CCDC68Q9H2F9 TPRX2P-201ENST00000535362 881 ntBASIC15.28■□□□□ 0.04
CCDC68Q9H2F9 DUT-210ENST00000559935 569 ntTSL 3 BASIC15.28■□□□□ 0.04
CCDC68Q9H2F9 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
CCDC68Q9H2F9 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC15.28■□□□□ 0.04
CCDC68Q9H2F9 SAMD11P1-201ENST00000571429 661 ntBASIC15.28■□□□□ 0.04
CCDC68Q9H2F9 SERF2-217ENST00000630046 862 ntTSL 5 BASIC15.28■□□□□ 0.04
CCDC68Q9H2F9 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC68Q9H2F9 AC004840.1-201ENST00000636359 365 ntBASIC15.28■□□□□ 0.04
CCDC68Q9H2F9 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC68Q9H2F9 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC15.28■□□□□ 0.04
CCDC68Q9H2F9 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC68Q9H2F9 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC68Q9H2F9 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCDC68Q9H2F9 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC15.28■□□□□ 0.04
CCDC68Q9H2F9 AC007686.3-201ENST00000619017 3487 ntBASIC15.28■□□□□ 0.04
CCDC68Q9H2F9 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms