RNA–Protein interactions for RNA: ENST00000299441.4

DCHS1-201, Transcript of dachsous cadherin-related 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DCHS1, Length 10,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCHS1-201ENST00000299441 DCAF8L2P0C7V8 631 aa24.59■■□□□ 1.53
DCHS1-201ENST00000299441 EHMT2Q96KQ7 1210 aa23.02■■□□□ 1.28
DCHS1-201ENST00000299441 SUPT5HO00267 1087 aaKnown RBP22.99■■□□□ 1.27
DCHS1-201ENST00000299441 SHROOM4Q9ULL8 1493 aa22.78■■□□□ 1.24
DCHS1-201ENST00000299441 TTBK1Q5TCY1 1321 aaPredicted RBP22.21■■□□□ 1.15
DCHS1-201ENST00000299441 NISCHQ9Y2I1 1504 aa22.17■■□□□ 1.14
DCHS1-201ENST00000299441 APLP2Q06481 763 aa22.02■■□□□ 1.12
DCHS1-201ENST00000299441 PELP1Q8IZL8 1130 aaKnown RBP21.97■■□□□ 1.11
DCHS1-201ENST00000299441 RANGAP1P46060 587 aaPredicted RBP21.92■■□□□ 1.1
DCHS1-201ENST00000299441 FAM9AQ8IZU1 332 aaPredicted RBP21.89■■□□□ 1.1
DCHS1-201ENST00000299441 ATP1B4Q9UN42 357 aaPredicted RBP21.65■■□□□ 1.06
DCHS1-201ENST00000299441 PCGF6Q9BYE7 350 aa21.55■■□□□ 1.04
DCHS1-201ENST00000299441 ERICH6Q7L0X2 663 aa21.36■■□□□ 1.01
DCHS1-201ENST00000299441 CCER1Q8TC90 406 aaPredicted RBP21.18■□□□□ 0.98
DCHS1-201ENST00000299441 UBTFP17480 764 aaKnown RBP21.14■□□□□ 0.97
DCHS1-201ENST00000299441 YTHDC1Q96MU7 727 aaKnown RBP21.11■□□□□ 0.97
DCHS1-201ENST00000299441 TRIM41Q8WV44 630 aa21.08■□□□□ 0.97
DCHS1-201ENST00000299441 PPARGC1BQ86YN6 1023 aaKnown RBP21.06■□□□□ 0.96
DCHS1-201ENST00000299441 CENPBP07199 599 aaPredicted RBP20.99■□□□□ 0.95
DCHS1-201ENST00000299441 CHIC1Q5VXU3 224 aa20.95■□□□□ 0.94
DCHS1-201ENST00000299441 MYT1LQ9UL68 1186 aa20.94■□□□□ 0.94
DCHS1-201ENST00000299441 NEFLP07196 543 aa20.87■□□□□ 0.93
DCHS1-201ENST00000299441 POLR3GLQ9BT43 218 aa20.86■□□□□ 0.93
DCHS1-201ENST00000299441 CNGB1Q14028 1251 aaPredicted RBP20.79■□□□□ 0.92
DCHS1-201ENST00000299441 ITGAEP38570 1179 aa20.75■□□□□ 0.91
DCHS1-201ENST00000299441 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.75■□□□□ 0.91
DCHS1-201ENST00000299441 HNRNPUL2Q1KMD3 747 aaKnown RBP20.75■□□□□ 0.91
DCHS1-201ENST00000299441 MYT1Q01538 1121 aa20.69■□□□□ 0.9
DCHS1-201ENST00000299441 ZEB1P37275 1124 aaPredicted RBP20.69■□□□□ 0.9
DCHS1-201ENST00000299441 SLC4A1APQ9BWU0 796 aaKnown RBP20.6■□□□□ 0.89
DCHS1-201ENST00000299441 DAXXQ9UER7 740 aaPredicted RBP20.5■□□□□ 0.87
DCHS1-201ENST00000299441 LOC105371045A0A1W2PR82 267 aa20.15■□□□□ 0.82
DCHS1-201ENST00000299441 TRIM26Q12899 539 aaPredicted RBP20.13■□□□□ 0.81
DCHS1-201ENST00000299441 CLSPNQ9HAW4 1339 aa20.11■□□□□ 0.81
DCHS1-201ENST00000299441 BCL11AQ9H165 835 aa20.07■□□□□ 0.8
DCHS1-201ENST00000299441 FAM50AQ14320 339 aaKnown RBP20.06■□□□□ 0.8
DCHS1-201ENST00000299441 ZNF316A6NFI3 1004 aaPredicted RBP20.05■□□□□ 0.8
DCHS1-201ENST00000299441 SLC24A1O60721 1099 aa20■□□□□ 0.79
DCHS1-201ENST00000299441 HRCP23327 699 aa19.99■□□□□ 0.79
DCHS1-201ENST00000299441 ZNF326Q5BKZ1 582 aaKnown RBP19.95■□□□□ 0.78
DCHS1-201ENST00000299441 TRIM52Q96A61 297 aa19.93■□□□□ 0.78
DCHS1-201ENST00000299441 NEUROD1Q13562 356 aa19.91■□□□□ 0.78
DCHS1-201ENST00000299441 PABPN1Q86U42 306 aaKnown RBP eCLIP19.9■□□□□ 0.78
DCHS1-201ENST00000299441 FBLN2P98095 1184 aa19.89■□□□□ 0.77
DCHS1-201ENST00000299441 BCANQ96GW7 911 aa19.84■□□□□ 0.77
DCHS1-201ENST00000299441 ABCC9O60706 1549 aa19.82■□□□□ 0.76
DCHS1-201ENST00000299441 ARID3CA6NKF2 412 aa19.79■□□□□ 0.76
DCHS1-201ENST00000299441 RTL5Q5HYW3 569 aaPredicted RBP19.78■□□□□ 0.76
DCHS1-201ENST00000299441 PLPPR3Q6T4P5 718 aa19.76■□□□□ 0.75
DCHS1-201ENST00000299441 DIEXFQ68CQ4 756 aaKnown RBP19.69■□□□□ 0.74
DCHS1-201ENST00000299441 ZBTB47Q9UFB7 747 aaPredicted RBP19.66■□□□□ 0.74
DCHS1-201ENST00000299441 CANXP27824 592 aaKnown RBP19.64■□□□□ 0.73
DCHS1-201ENST00000299441 P3H3Q8IVL6 736 aa19.54■□□□□ 0.72
DCHS1-201ENST00000299441 ANP32CO43423 234 aa19.47■□□□□ 0.71
DCHS1-201ENST00000299441 ZNF777Q9ULD5 760 aaPredicted RBP19.45■□□□□ 0.7
DCHS1-201ENST00000299441 NEFMP07197 916 aa19.39■□□□□ 0.69
DCHS1-201ENST00000299441 SCRIBQ14160 1630 aa19.34■□□□□ 0.69
DCHS1-201ENST00000299441 ESF1Q9H501 851 aaKnown RBP19.33■□□□□ 0.69
DCHS1-201ENST00000299441 CDK11AQ9UQ88 783 aaPredicted RBP19.32■□□□□ 0.68
DCHS1-201ENST00000299441 NPM2Q86SE8 214 aaKnown RBP19.31■□□□□ 0.68
DCHS1-201ENST00000299441 SENP3Q9H4L4 574 aaPredicted RBP19.3■□□□□ 0.68
DCHS1-201ENST00000299441 CHGAP10645 457 aaKnown RBP19.29■□□□□ 0.68
DCHS1-201ENST00000299441 STAG3Q9UJ98 1225 aa19.29■□□□□ 0.68
DCHS1-201ENST00000299441 GTF3C3Q9Y5Q9 886 aa19.27■□□□□ 0.68
DCHS1-201ENST00000299441 PLEKHG5O94827 1062 aa19.24■□□□□ 0.67
DCHS1-201ENST00000299441 A0A0G2JS52 829 aa19.24■□□□□ 0.67
DCHS1-201ENST00000299441 SCAF1Q9H7N4 1312 aaKnown RBP19.23■□□□□ 0.67
DCHS1-201ENST00000299441 SALL2Q9Y467 1007 aaPredicted RBP19.13■□□□□ 0.65
DCHS1-201ENST00000299441 HSP90AA1P07900 732 aaKnown RBP19.12■□□□□ 0.65
DCHS1-201ENST00000299441 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.11■□□□□ 0.65
DCHS1-201ENST00000299441 ANP32AP39687 249 aaKnown RBP19.08■□□□□ 0.64
DCHS1-201ENST00000299441 ZBTB7CA1YPR0 619 aa19.04■□□□□ 0.64
DCHS1-201ENST00000299441 ARXQ96QS3 562 aa19.02■□□□□ 0.64
DCHS1-201ENST00000299441 FAM9BQ8IZU0 186 aa18.97■□□□□ 0.63
DCHS1-201ENST00000299441 CHIC2Q9UKJ5 165 aa18.95■□□□□ 0.62
DCHS1-201ENST00000299441 TONSLQ96HA7 1378 aa18.94■□□□□ 0.62
DCHS1-201ENST00000299441 NPM1P06748 294 aaKnown RBP eCLIP18.93■□□□□ 0.62
DCHS1-201ENST00000299441 C14orf37Q86TY3 774 aa18.93■□□□□ 0.62
DCHS1-201ENST00000299441 KDM2AQ9Y2K7 1162 aa18.91■□□□□ 0.62
DCHS1-201ENST00000299441 ANP32BQ92688 251 aaKnown RBP18.9■□□□□ 0.62
DCHS1-201ENST00000299441 FKBP8Q14318 412 aa18.87■□□□□ 0.61
DCHS1-201ENST00000299441 EIF5BO60841 1220 aaKnown RBP18.87■□□□□ 0.61
DCHS1-201ENST00000299441 HNRNPUQ00839 825 aaKnown RBP eCLIP18.86■□□□□ 0.61
DCHS1-201ENST00000299441 UPF2Q9HAU5 1272 aaKnown RBP18.83■□□□□ 0.61
DCHS1-201ENST00000299441 NBR1Q14596 966 aa18.82■□□□□ 0.6
DCHS1-201ENST00000299441 DDX10Q13206 875 aaKnown RBP18.82■□□□□ 0.6
DCHS1-201ENST00000299441 CSRNP3Q8WYN3 585 aa18.78■□□□□ 0.6
DCHS1-201ENST00000299441 SENP3-EIF4A1A0A087X0R7 540 aa18.76■□□□□ 0.59
DCHS1-201ENST00000299441 IRX6P78412 446 aaPredicted RBP18.76■□□□□ 0.59
DCHS1-201ENST00000299441 HIRIP3Q9BW71 556 aaPredicted RBP18.75■□□□□ 0.59
DCHS1-201ENST00000299441 TULP1O00294 542 aaPredicted RBP18.75■□□□□ 0.59
DCHS1-201ENST00000299441 WDR43Q15061 677 aaKnown RBP eCLIP18.74■□□□□ 0.59
DCHS1-201ENST00000299441 TMC1Q8TDI8 760 aa18.74■□□□□ 0.59
DCHS1-201ENST00000299441 PPP1R15AO75807 674 aaPredicted RBP18.7■□□□□ 0.58
DCHS1-201ENST00000299441 ACIN1Q9UKV3 1341 aaKnown RBP18.7■□□□□ 0.58
DCHS1-201ENST00000299441 ARID4BQ4LE39 1312 aaPredicted RBP18.69■□□□□ 0.58
DCHS1-201ENST00000299441 TPRNQ4KMQ1 711 aa18.69■□□□□ 0.58
DCHS1-201ENST00000299441 KCNH8Q96L42 1107 aa18.69■□□□□ 0.58
DCHS1-201ENST00000299441 HAP1P54257 671 aaPredicted RBP18.67■□□□□ 0.58
DCHS1-201ENST00000299441 CCDC136Q96JN2 1154 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms