RNA–Protein interactions for RNA: ENST00000222345.10

SIPA1L3-201, Transcript of signal induced proliferation associated 1 like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIPA1L3, Length 7,987 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1L3-201ENST00000222345 PELP1Q8IZL8 1130 aaKnown RBP22.77■■□□□ 1.24
SIPA1L3-201ENST00000222345 DCAF8L2P0C7V8 631 aa22.56■■□□□ 1.2
SIPA1L3-201ENST00000222345 MYT1Q01538 1121 aa22.44■■□□□ 1.18
SIPA1L3-201ENST00000222345 CCER1Q8TC90 406 aaPredicted RBP21.63■■□□□ 1.05
SIPA1L3-201ENST00000222345 ERICH6Q7L0X2 663 aa21.59■■□□□ 1.05
SIPA1L3-201ENST00000222345 CENPBP07199 599 aaPredicted RBP21.51■■□□□ 1.03
SIPA1L3-201ENST00000222345 ZEB1P37275 1124 aaPredicted RBP21.24■□□□□ 0.99
SIPA1L3-201ENST00000222345 SUPT5HO00267 1087 aaKnown RBP21.22■□□□□ 0.99
SIPA1L3-201ENST00000222345 EHMT2Q96KQ7 1210 aa20.94■□□□□ 0.94
SIPA1L3-201ENST00000222345 YTHDC1Q96MU7 727 aaKnown RBP20.91■□□□□ 0.94
SIPA1L3-201ENST00000222345 APLP2Q06481 763 aa20.9■□□□□ 0.94
SIPA1L3-201ENST00000222345 NEFLP07196 543 aa20.86■□□□□ 0.93
SIPA1L3-201ENST00000222345 TTBK1Q5TCY1 1321 aaPredicted RBP20.85■□□□□ 0.93
SIPA1L3-201ENST00000222345 PCGF6Q9BYE7 350 aa20.85■□□□□ 0.93
SIPA1L3-201ENST00000222345 SHROOM4Q9ULL8 1493 aa20.61■□□□□ 0.89
SIPA1L3-201ENST00000222345 NISCHQ9Y2I1 1504 aa20.45■□□□□ 0.86
SIPA1L3-201ENST00000222345 DAXXQ9UER7 740 aaPredicted RBP20.41■□□□□ 0.86
SIPA1L3-201ENST00000222345 FAM9AQ8IZU1 332 aaPredicted RBP20.29■□□□□ 0.84
SIPA1L3-201ENST00000222345 RTL5Q5HYW3 569 aaPredicted RBP20.19■□□□□ 0.82
SIPA1L3-201ENST00000222345 HRCP23327 699 aa20.17■□□□□ 0.82
SIPA1L3-201ENST00000222345 TRIM26Q12899 539 aaPredicted RBP20.04■□□□□ 0.8
SIPA1L3-201ENST00000222345 RANGAP1P46060 587 aaPredicted RBP20■□□□□ 0.79
SIPA1L3-201ENST00000222345 ATP1B4Q9UN42 357 aaPredicted RBP19.91■□□□□ 0.78
SIPA1L3-201ENST00000222345 ZNF316A6NFI3 1004 aaPredicted RBP19.89■□□□□ 0.78
SIPA1L3-201ENST00000222345 TRIM41Q8WV44 630 aa19.82■□□□□ 0.76
SIPA1L3-201ENST00000222345 GLIPR1L2Q4G1C9 344 aa19.71■□□□□ 0.75
SIPA1L3-201ENST00000222345 DIEXFQ68CQ4 756 aaKnown RBP19.62■□□□□ 0.73
SIPA1L3-201ENST00000222345 UBTFP17480 764 aaKnown RBP19.61■□□□□ 0.73
SIPA1L3-201ENST00000222345 MYT1LQ9UL68 1186 aa19.59■□□□□ 0.73
SIPA1L3-201ENST00000222345 CDK11AQ9UQ88 783 aaPredicted RBP19.53■□□□□ 0.72
SIPA1L3-201ENST00000222345 GTF3C3Q9Y5Q9 886 aa19.49■□□□□ 0.71
SIPA1L3-201ENST00000222345 CLSPNQ9HAW4 1339 aa19.48■□□□□ 0.71
SIPA1L3-201ENST00000222345 EIF5BO60841 1220 aaKnown RBP19.3■□□□□ 0.68
SIPA1L3-201ENST00000222345 ANP32AP39687 249 aaKnown RBP19.3■□□□□ 0.68
SIPA1L3-201ENST00000222345 PPARGC1BQ86YN6 1023 aaKnown RBP19.28■□□□□ 0.68
SIPA1L3-201ENST00000222345 ACIN1Q9UKV3 1341 aaKnown RBP19.24■□□□□ 0.67
SIPA1L3-201ENST00000222345 ANP32BQ92688 251 aaKnown RBP19.2■□□□□ 0.66
SIPA1L3-201ENST00000222345 POLR3GLQ9BT43 218 aa19.18■□□□□ 0.66
SIPA1L3-201ENST00000222345 CHIC1Q5VXU3 224 aa19.16■□□□□ 0.66
SIPA1L3-201ENST00000222345 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.11■□□□□ 0.65
SIPA1L3-201ENST00000222345 HNRNPUL2Q1KMD3 747 aaKnown RBP19.11■□□□□ 0.65
SIPA1L3-201ENST00000222345 BCANQ96GW7 911 aa19.09■□□□□ 0.65
SIPA1L3-201ENST00000222345 ANP32CO43423 234 aa19.08■□□□□ 0.64
SIPA1L3-201ENST00000222345 ZBTB47Q9UFB7 747 aaPredicted RBP19.01■□□□□ 0.63
SIPA1L3-201ENST00000222345 CNGB1Q14028 1251 aaPredicted RBP18.98■□□□□ 0.63
SIPA1L3-201ENST00000222345 ITGAEP38570 1179 aa18.97■□□□□ 0.63
SIPA1L3-201ENST00000222345 SLC4A1APQ9BWU0 796 aaKnown RBP18.95■□□□□ 0.62
SIPA1L3-201ENST00000222345 LOC105371045A0A1W2PR82 267 aa18.86■□□□□ 0.61
SIPA1L3-201ENST00000222345 TNNT2P45379 298 aaPredicted RBP18.83■□□□□ 0.61
SIPA1L3-201ENST00000222345 UPF2Q9HAU5 1272 aaKnown RBP18.79■□□□□ 0.6
SIPA1L3-201ENST00000222345 CANXP27824 592 aaKnown RBP18.77■□□□□ 0.59
SIPA1L3-201ENST00000222345 NPM2Q86SE8 214 aaKnown RBP18.73■□□□□ 0.59
SIPA1L3-201ENST00000222345 HSP90AA1P07900 732 aaKnown RBP18.71■□□□□ 0.59
SIPA1L3-201ENST00000222345 ANP32EQ9BTT0 268 aa18.68■□□□□ 0.58
SIPA1L3-201ENST00000222345 FKBP8Q14318 412 aa18.68■□□□□ 0.58
SIPA1L3-201ENST00000222345 NBR1Q14596 966 aa18.66■□□□□ 0.58
SIPA1L3-201ENST00000222345 NEUROD1Q13562 356 aa18.58■□□□□ 0.56
SIPA1L3-201ENST00000222345 TRIM44Q96DX7 344 aaPredicted RBP18.57■□□□□ 0.56
SIPA1L3-201ENST00000222345 FAM50AQ14320 339 aaKnown RBP18.55■□□□□ 0.56
SIPA1L3-201ENST00000222345 ERICH6BQ5W0A0 696 aa18.55■□□□□ 0.56
SIPA1L3-201ENST00000222345 SCAF1Q9H7N4 1312 aaKnown RBP18.54■□□□□ 0.56
SIPA1L3-201ENST00000222345 DDRGK1Q96HY6 314 aa18.54■□□□□ 0.56
SIPA1L3-201ENST00000222345 NEFMP07197 916 aa18.52■□□□□ 0.56
SIPA1L3-201ENST00000222345 TRIM52Q96A61 297 aa18.48■□□□□ 0.55
SIPA1L3-201ENST00000222345 DCAF1Q9Y4B6 1507 aa18.48■□□□□ 0.55
SIPA1L3-201ENST00000222345 NCLP19338 710 aaKnown RBP18.48■□□□□ 0.55
SIPA1L3-201ENST00000222345 CDK11BP21127 795 aaKnown RBP18.45■□□□□ 0.54
SIPA1L3-201ENST00000222345 CCDC136Q96JN2 1154 aa18.45■□□□□ 0.54
SIPA1L3-201ENST00000222345 SLC24A1O60721 1099 aa18.42■□□□□ 0.54
SIPA1L3-201ENST00000222345 BECN1Q14457 450 aa18.42■□□□□ 0.54
SIPA1L3-201ENST00000222345 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.4■□□□□ 0.54
SIPA1L3-201ENST00000222345 BCL11AQ9H165 835 aa18.39■□□□□ 0.53
SIPA1L3-201ENST00000222345 HNRNPUQ00839 825 aaKnown RBP eCLIP18.36■□□□□ 0.53
SIPA1L3-201ENST00000222345 PPM1GO15355 546 aaPredicted RBP18.34■□□□□ 0.53
SIPA1L3-201ENST00000222345 GOLGA6L22H0YM25 854 aa18.32■□□□□ 0.52
SIPA1L3-201ENST00000222345 NAP1L5Q96NT1 182 aaPredicted RBP18.29■□□□□ 0.52
SIPA1L3-201ENST00000222345 ARXQ96QS3 562 aa18.29■□□□□ 0.52
SIPA1L3-201ENST00000222345 ZNF326Q5BKZ1 582 aaKnown RBP18.26■□□□□ 0.51
SIPA1L3-201ENST00000222345 CCDC180Q9P1Z9 1646 aa18.25■□□□□ 0.51
SIPA1L3-201ENST00000222345 FBLN2P98095 1184 aa18.25■□□□□ 0.51
SIPA1L3-201ENST00000222345 TONSLQ96HA7 1378 aa18.2■□□□□ 0.5
SIPA1L3-201ENST00000222345 DNTTIP2Q5QJE6 756 aaKnown RBP18.19■□□□□ 0.5
SIPA1L3-201ENST00000222345 PTMAP06454 111 aaKnown RBP18.16■□□□□ 0.5
SIPA1L3-201ENST00000222345 NOP58Q9Y2X3 529 aaKnown RBP18.14■□□□□ 0.49
SIPA1L3-201ENST00000222345 PABPN1Q86U42 306 aaKnown RBP eCLIP18.13■□□□□ 0.49
SIPA1L3-201ENST00000222345 FAM9BQ8IZU0 186 aa18.12■□□□□ 0.49
SIPA1L3-201ENST00000222345 PLPPR3Q6T4P5 718 aa18.1■□□□□ 0.49
SIPA1L3-201ENST00000222345 TMC1Q8TDI8 760 aa18.1■□□□□ 0.49
SIPA1L3-201ENST00000222345 L1TD1Q5T7N2 865 aaKnown RBP18.09■□□□□ 0.49
SIPA1L3-201ENST00000222345 CHAF1AQ13111 956 aaPredicted RBP18.07■□□□□ 0.48
SIPA1L3-201ENST00000222345 DDX10Q13206 875 aaKnown RBP18.07■□□□□ 0.48
SIPA1L3-201ENST00000222345 MYH16Q9H6N6 1097 aa18.07■□□□□ 0.48
SIPA1L3-201ENST00000222345 RTN4Q9NQC3 1192 aaKnown RBP18.03■□□□□ 0.48
SIPA1L3-201ENST00000222345 DEKP35659 375 aaKnown RBP18.02■□□□□ 0.47
SIPA1L3-201ENST00000222345 GOLGA6L6A8MZA4 724 aa18.02■□□□□ 0.47
SIPA1L3-201ENST00000222345 ARID3CA6NKF2 412 aa18.01■□□□□ 0.47
SIPA1L3-201ENST00000222345 ZRSR1Q15695 479 aaKnown RBP18■□□□□ 0.47
SIPA1L3-201ENST00000222345 MIER1Q8N108 512 aa18■□□□□ 0.47
SIPA1L3-201ENST00000222345 MSNP26038 577 aaKnown RBP17.99■□□□□ 0.47
SIPA1L3-201ENST00000222345 WDR43Q15061 677 aaKnown RBP eCLIP17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms