RNA–Protein interactions for RNA: ENST00000272238.8

ATP6V1C2-201, Transcript of ATPase H+ transporting V1 subunit C2, humanhuman

TSL 5 BASIC

Gene ATP6V1C2, Length 1,565 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1C2-201ENST00000272238 NISCHQ9Y2I1 1504 aa37.23■■■■□ 3.55
ATP6V1C2-201ENST00000272238 CCDC180Q9P1Z9 1646 aa33.02■■■□□ 2.88
ATP6V1C2-201ENST00000272238 ABCC9O60706 1549 aa32.01■■■□□ 2.72
ATP6V1C2-201ENST00000272238 ZCCHC6Q5VYS8 1495 aaKnown RBP31.12■■■□□ 2.57
ATP6V1C2-201ENST00000272238 DCAF8L2P0C7V8 631 aa31.03■■■□□ 2.56
ATP6V1C2-201ENST00000272238 RB1CC1Q8TDY2 1594 aa30.89■■■□□ 2.54
ATP6V1C2-201ENST00000272238 NACADO15069 1562 aa30.89■■■□□ 2.53
ATP6V1C2-201ENST00000272238 DCAF1Q9Y4B6 1507 aa30.75■■■□□ 2.51
ATP6V1C2-201ENST00000272238 MYO15BQ96JP2 1530 aa30.71■■■□□ 2.51
ATP6V1C2-201ENST00000272238 UNC13AQ9UPW8 1703 aa30.33■■■□□ 2.45
ATP6V1C2-201ENST00000272238 SCRIBQ14160 1630 aa30.26■■■□□ 2.43
ATP6V1C2-201ENST00000272238 BICRAQ9NZM4 1560 aa29.95■■■□□ 2.38
ATP6V1C2-201ENST00000272238 PABPN1Q86U42 306 aaKnown RBP eCLIP29.91■■■□□ 2.38
ATP6V1C2-201ENST00000272238 SHROOM4Q9ULL8 1493 aa29.76■■■□□ 2.35
ATP6V1C2-201ENST00000272238 EIF4G1Q04637 1599 aaKnown RBP29.15■■■□□ 2.26
ATP6V1C2-201ENST00000272238 CECR2Q9BXF3 1484 aa29.01■■■□□ 2.23
ATP6V1C2-201ENST00000272238 CC2D2AQ9P2K1 1620 aa28.97■■■□□ 2.23
ATP6V1C2-201ENST00000272238 DNAJC5BQ9UF47 199 aa28.94■■■□□ 2.22
ATP6V1C2-201ENST00000272238 SMARCA4P51532 1647 aa28.89■■■□□ 2.22
ATP6V1C2-201ENST00000272238 BAZ1AQ9NRL2 1556 aaPredicted RBP28.86■■■□□ 2.21
ATP6V1C2-201ENST00000272238 MROH2BQ7Z745 1585 aa28.75■■■□□ 2.19
ATP6V1C2-201ENST00000272238 SMARCA2P51531 1590 aa28.57■■■□□ 2.16
ATP6V1C2-201ENST00000272238 ATAD2BQ9ULI0 1458 aa28.56■■■□□ 2.16
ATP6V1C2-201ENST00000272238 WIZO95785 1651 aa28.53■■■□□ 2.16
ATP6V1C2-201ENST00000272238 PEG3Q9GZU2 1588 aa28.52■■■□□ 2.16
ATP6V1C2-201ENST00000272238 RSF1Q96T23 1441 aaPredicted RBP28.47■■■□□ 2.15
ATP6V1C2-201ENST00000272238 NCAPD3P42695 1498 aa28.43■■■□□ 2.14
ATP6V1C2-201ENST00000272238 HMGXB3Q12766 1538 aa28.42■■■□□ 2.14
ATP6V1C2-201ENST00000272238 BAZ1BQ9UIG0 1483 aaKnown RBP28.41■■■□□ 2.14
ATP6V1C2-201ENST00000272238 TOP2AP11388 1531 aaKnown RBP28.18■■■□□ 2.1
ATP6V1C2-201ENST00000272238 SUPT5HO00267 1087 aaKnown RBP28.1■■■□□ 2.09
ATP6V1C2-201ENST00000272238 CCDC88BA6NC98 1476 aa27.8■■■□□ 2.04
ATP6V1C2-201ENST00000272238 NESP48681 1621 aa27.8■■■□□ 2.04
ATP6V1C2-201ENST00000272238 LAMC3Q9Y6N6 1575 aa27.73■■■□□ 2.03
ATP6V1C2-201ENST00000272238 CADPSQ9ULU8 1353 aa27.64■■■□□ 2.02
ATP6V1C2-201ENST00000272238 PRDM2Q13029 1718 aa27.58■■■□□ 2.01
ATP6V1C2-201ENST00000272238 CFTRP13569 1480 aa27.58■■■□□ 2.01
ATP6V1C2-201ENST00000272238 KIF21AQ7Z4S6 1674 aa27.57■■■□□ 2
ATP6V1C2-201ENST00000272238 ERCC6Q03468 1493 aa27.56■■■□□ 2
ATP6V1C2-201ENST00000272238 PDS5BQ9NTI5 1447 aa27.47■■□□□ 1.99
ATP6V1C2-201ENST00000272238 FANCD2Q9BXW9 1451 aa27.41■■□□□ 1.98
ATP6V1C2-201ENST00000272238 CEP164Q9UPV0 1460 aa27.37■■□□□ 1.97
ATP6V1C2-201ENST00000272238 THOC2Q8NI27 1593 aaKnown RBP27.33■■□□□ 1.97
ATP6V1C2-201ENST00000272238 MRC2Q9UBG0 1479 aa27.23■■□□□ 1.95
ATP6V1C2-201ENST00000272238 WDR62O43379 1518 aa27.14■■□□□ 1.94
ATP6V1C2-201ENST00000272238 URB2Q14146 1524 aaKnown RBP27.12■■□□□ 1.93
ATP6V1C2-201ENST00000272238 CUX2O14529 1486 aa27.05■■□□□ 1.92
ATP6V1C2-201ENST00000272238 DNMBPQ6XZF7 1577 aa27.03■■□□□ 1.92
ATP6V1C2-201ENST00000272238 ABCC8Q09428 1581 aa27.03■■□□□ 1.92
ATP6V1C2-201ENST00000272238 TOPBP1Q92547 1522 aa27.01■■□□□ 1.91
ATP6V1C2-201ENST00000272238 CUX1P39880 1505 aa26.96■■□□□ 1.91
ATP6V1C2-201ENST00000272238 SYNJ1O43426 1573 aa26.88■■□□□ 1.89
ATP6V1C2-201ENST00000272238 WRNQ14191 1432 aaPredicted RBP eCLIP26.88■■□□□ 1.89
ATP6V1C2-201ENST00000272238 BIVM-ERCC5R4GMW8 1640 aa26.84■■□□□ 1.89
ATP6V1C2-201ENST00000272238 FGD5Q6ZNL6 1462 aa26.82■■□□□ 1.88
ATP6V1C2-201ENST00000272238 TOP2BQ02880 1626 aa26.82■■□□□ 1.88
ATP6V1C2-201ENST00000272238 POLA1P09884 1462 aaPredicted RBP26.81■■□□□ 1.88
ATP6V1C2-201ENST00000272238 IFT140Q96RY7 1462 aa26.72■■□□□ 1.87
ATP6V1C2-201ENST00000272238 TARBP1Q13395 1621 aaKnown RBP26.72■■□□□ 1.87
ATP6V1C2-201ENST00000272238 RAD54L2Q9Y4B4 1467 aa26.71■■□□□ 1.87
ATP6V1C2-201ENST00000272238 WDR97A6NE52 1622 aa26.65■■□□□ 1.86
ATP6V1C2-201ENST00000272238 SOGA1O94964 1423 aa26.65■■□□□ 1.86
ATP6V1C2-201ENST00000272238 ZNF608Q9ULD9 1512 aaPredicted RBP26.63■■□□□ 1.85
ATP6V1C2-201ENST00000272238 EIF4G3O43432 1585 aaKnown RBP26.62■■□□□ 1.85
ATP6V1C2-201ENST00000272238 ABCA10Q8WWZ4 1543 aa26.51■■□□□ 1.83
ATP6V1C2-201ENST00000272238 AQRO60306 1485 aaKnown RBP eCLIP26.5■■□□□ 1.83
ATP6V1C2-201ENST00000272238 TDRD9Q8NDG6 1382 aaKnown RBP26.49■■□□□ 1.83
ATP6V1C2-201ENST00000272238 ABCA5Q8WWZ7 1642 aa26.46■■□□□ 1.83
ATP6V1C2-201ENST00000272238 TRIM41Q8WV44 630 aa26.46■■□□□ 1.83
ATP6V1C2-201ENST00000272238 PBRM1Q86U86 1689 aa26.45■■□□□ 1.83
ATP6V1C2-201ENST00000272238 GAPVD1Q14C86 1478 aa26.39■■□□□ 1.81
ATP6V1C2-201ENST00000272238 GRIN2BQ13224 1484 aa26.32■■□□□ 1.8
ATP6V1C2-201ENST00000272238 CHIC1Q5VXU3 224 aa26.32■■□□□ 1.8
ATP6V1C2-201ENST00000272238 SNAPC4Q5SXM2 1469 aa26.31■■□□□ 1.8
ATP6V1C2-201ENST00000272238 KIF27Q86VH2 1401 aa26.26■■□□□ 1.79
ATP6V1C2-201ENST00000272238 CHD1O14646 1710 aa26.26■■□□□ 1.79
ATP6V1C2-201ENST00000272238 ERICH3Q5RHP9 1530 aa26.21■■□□□ 1.79
ATP6V1C2-201ENST00000272238 MAGI1Q96QZ7 1491 aaPredicted RBP26.21■■□□□ 1.79
ATP6V1C2-201ENST00000272238 ADAMTS12P58397 1594 aa26.2■■□□□ 1.78
ATP6V1C2-201ENST00000272238 RUSC2Q8N2Y8 1516 aa26.2■■□□□ 1.78
ATP6V1C2-201ENST00000272238 FBLN2P98095 1184 aa26.14■■□□□ 1.78
ATP6V1C2-201ENST00000272238 SYNJ2O15056 1496 aa26.12■■□□□ 1.77
ATP6V1C2-201ENST00000272238 CUL7Q14999 1698 aa26.11■■□□□ 1.77
ATP6V1C2-201ENST00000272238 FHAD1B1AJZ9 1412 aa26.05■■□□□ 1.76
ATP6V1C2-201ENST00000272238 CHMP7Q8WUX9 453 aaPredicted RBP26.05■■□□□ 1.76
ATP6V1C2-201ENST00000272238 IGF1RP08069 1367 aa26.05■■□□□ 1.76
ATP6V1C2-201ENST00000272238 GRIN2AQ12879 1464 aa26.02■■□□□ 1.76
ATP6V1C2-201ENST00000272238 FAM9AQ8IZU1 332 aaPredicted RBP26■■□□□ 1.75
ATP6V1C2-201ENST00000272238 CARMIL1Q5VZK9 1371 aa25.94■■□□□ 1.74
ATP6V1C2-201ENST00000272238 EEA1Q15075 1411 aa25.94■■□□□ 1.74
ATP6V1C2-201ENST00000272238 OSCARQ8IYS5 282 aa25.93■■□□□ 1.74
ATP6V1C2-201ENST00000272238 CEP170Q5SW79 1584 aa25.92■■□□□ 1.74
ATP6V1C2-201ENST00000272238 RAPGEF2Q9Y4G8 1499 aa25.86■■□□□ 1.73
ATP6V1C2-201ENST00000272238 CLASP1Q7Z460 1538 aa25.85■■□□□ 1.73
ATP6V1C2-201ENST00000272238 CSRNP3Q8WYN3 585 aa25.84■■□□□ 1.73
ATP6V1C2-201ENST00000272238 NUP160Q12769 1436 aa25.84■■□□□ 1.73
ATP6V1C2-201ENST00000272238 PRXQ9BXM0 1461 aa25.82■■□□□ 1.72
ATP6V1C2-201ENST00000272238 KIF21BO75037 1637 aa25.76■■□□□ 1.71
ATP6V1C2-201ENST00000272238 CTTNBP2Q8WZ74 1663 aa25.76■■□□□ 1.71
ATP6V1C2-201ENST00000272238 EHMT2Q96KQ7 1210 aa25.73■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms