RNA–Protein interactions for RNA: ENST00000638257.1

SPIN3-204, Transcript of spindlin family member 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SPIN3, Length 4,835 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-204ENST00000638257 NISCHQ9Y2I1 1504 aa23.62■■□□□ 1.37
SPIN3-204ENST00000638257 DCAF8L2P0C7V8 631 aa23.36■■□□□ 1.33
SPIN3-204ENST00000638257 SUPT5HO00267 1087 aaKnown RBP23.17■■□□□ 1.3
SPIN3-204ENST00000638257 PELP1Q8IZL8 1130 aaKnown RBP22.63■■□□□ 1.21
SPIN3-204ENST00000638257 SHROOM4Q9ULL8 1493 aa22.62■■□□□ 1.21
SPIN3-204ENST00000638257 PCGF6Q9BYE7 350 aa22.4■■□□□ 1.18
SPIN3-204ENST00000638257 MYT1Q01538 1121 aa22.31■■□□□ 1.16
SPIN3-204ENST00000638257 ZEB1P37275 1124 aaPredicted RBP22.31■■□□□ 1.16
SPIN3-204ENST00000638257 CENPBP07199 599 aaPredicted RBP22.15■■□□□ 1.14
SPIN3-204ENST00000638257 EHMT2Q96KQ7 1210 aa21.94■■□□□ 1.1
SPIN3-204ENST00000638257 HRCP23327 699 aa21.92■■□□□ 1.1
SPIN3-204ENST00000638257 APLP2Q06481 763 aa21.82■■□□□ 1.08
SPIN3-204ENST00000638257 FAM9AQ8IZU1 332 aaPredicted RBP21.71■■□□□ 1.07
SPIN3-204ENST00000638257 CCER1Q8TC90 406 aaPredicted RBP21.7■■□□□ 1.06
SPIN3-204ENST00000638257 TRIM26Q12899 539 aaPredicted RBP21.61■■□□□ 1.05
SPIN3-204ENST00000638257 TRIM41Q8WV44 630 aa21.56■■□□□ 1.04
SPIN3-204ENST00000638257 ERICH6Q7L0X2 663 aa21.51■■□□□ 1.03
SPIN3-204ENST00000638257 TTBK1Q5TCY1 1321 aaPredicted RBP21.38■■□□□ 1.01
SPIN3-204ENST00000638257 CHIC1Q5VXU3 224 aa21.27■■□□□ 1
SPIN3-204ENST00000638257 NEFLP07196 543 aa21.27■■□□□ 1
SPIN3-204ENST00000638257 YTHDC1Q96MU7 727 aaKnown RBP21.25■□□□□ 0.99
SPIN3-204ENST00000638257 PPARGC1BQ86YN6 1023 aaKnown RBP21.17■□□□□ 0.98
SPIN3-204ENST00000638257 UBTFP17480 764 aaKnown RBP21.06■□□□□ 0.96
SPIN3-204ENST00000638257 LOC105371045A0A1W2PR82 267 aa21.01■□□□□ 0.95
SPIN3-204ENST00000638257 DIEXFQ68CQ4 756 aaKnown RBP20.88■□□□□ 0.93
SPIN3-204ENST00000638257 RANGAP1P46060 587 aaPredicted RBP20.83■□□□□ 0.92
SPIN3-204ENST00000638257 GTF3C3Q9Y5Q9 886 aa20.7■□□□□ 0.9
SPIN3-204ENST00000638257 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.66■□□□□ 0.9
SPIN3-204ENST00000638257 ACIN1Q9UKV3 1341 aaKnown RBP20.61■□□□□ 0.89
SPIN3-204ENST00000638257 ATP1B4Q9UN42 357 aaPredicted RBP20.57■□□□□ 0.88
SPIN3-204ENST00000638257 HNRNPUL2Q1KMD3 747 aaKnown RBP20.55■□□□□ 0.88
SPIN3-204ENST00000638257 DAXXQ9UER7 740 aaPredicted RBP20.42■□□□□ 0.86
SPIN3-204ENST00000638257 ZNF316A6NFI3 1004 aaPredicted RBP20.4■□□□□ 0.86
SPIN3-204ENST00000638257 DCAF1Q9Y4B6 1507 aa20.4■□□□□ 0.86
SPIN3-204ENST00000638257 RTL5Q5HYW3 569 aaPredicted RBP20.36■□□□□ 0.85
SPIN3-204ENST00000638257 CLSPNQ9HAW4 1339 aa20.33■□□□□ 0.85
SPIN3-204ENST00000638257 ITGAEP38570 1179 aa20.31■□□□□ 0.84
SPIN3-204ENST00000638257 CDK11AQ9UQ88 783 aaPredicted RBP20.15■□□□□ 0.82
SPIN3-204ENST00000638257 SCAF1Q9H7N4 1312 aaKnown RBP20.14■□□□□ 0.81
SPIN3-204ENST00000638257 BCANQ96GW7 911 aa20.11■□□□□ 0.81
SPIN3-204ENST00000638257 NEUROD1Q13562 356 aa20.06■□□□□ 0.8
SPIN3-204ENST00000638257 ANP32CO43423 234 aa20.06■□□□□ 0.8
SPIN3-204ENST00000638257 POLR3GLQ9BT43 218 aa20.02■□□□□ 0.79
SPIN3-204ENST00000638257 MYT1LQ9UL68 1186 aa19.95■□□□□ 0.78
SPIN3-204ENST00000638257 FAM50AQ14320 339 aaKnown RBP19.86■□□□□ 0.77
SPIN3-204ENST00000638257 CSRNP3Q8WYN3 585 aa19.81■□□□□ 0.76
SPIN3-204ENST00000638257 CNGB1Q14028 1251 aaPredicted RBP19.79■□□□□ 0.76
SPIN3-204ENST00000638257 ANP32AP39687 249 aaKnown RBP19.79■□□□□ 0.76
SPIN3-204ENST00000638257 FKBP8Q14318 412 aa19.77■□□□□ 0.76
SPIN3-204ENST00000638257 CCDC180Q9P1Z9 1646 aa19.72■□□□□ 0.75
SPIN3-204ENST00000638257 ZCCHC6Q5VYS8 1495 aaKnown RBP19.72■□□□□ 0.75
SPIN3-204ENST00000638257 MYO15BQ96JP2 1530 aa19.7■□□□□ 0.74
SPIN3-204ENST00000638257 TRIM52Q96A61 297 aa19.67■□□□□ 0.74
SPIN3-204ENST00000638257 MIER1Q8N108 512 aa19.64■□□□□ 0.73
SPIN3-204ENST00000638257 ANP32EQ9BTT0 268 aa19.58■□□□□ 0.72
SPIN3-204ENST00000638257 HNRNPUQ00839 825 aaKnown RBP eCLIP19.5■□□□□ 0.71
SPIN3-204ENST00000638257 DDX10Q13206 875 aaKnown RBP19.49■□□□□ 0.71
SPIN3-204ENST00000638257 ABCC9O60706 1549 aa19.46■□□□□ 0.71
SPIN3-204ENST00000638257 TONSLQ96HA7 1378 aa19.45■□□□□ 0.7
SPIN3-204ENST00000638257 ZBTB47Q9UFB7 747 aaPredicted RBP19.41■□□□□ 0.7
SPIN3-204ENST00000638257 EIF5BO60841 1220 aaKnown RBP19.41■□□□□ 0.7
SPIN3-204ENST00000638257 NPM2Q86SE8 214 aaKnown RBP19.4■□□□□ 0.7
SPIN3-204ENST00000638257 GLIPR1L2Q4G1C9 344 aa19.39■□□□□ 0.69
SPIN3-204ENST00000638257 ZNF326Q5BKZ1 582 aaKnown RBP19.37■□□□□ 0.69
SPIN3-204ENST00000638257 CCDC136Q96JN2 1154 aa19.33■□□□□ 0.68
SPIN3-204ENST00000638257 SLC4A1APQ9BWU0 796 aaKnown RBP19.31■□□□□ 0.68
SPIN3-204ENST00000638257 NBR1Q14596 966 aa19.31■□□□□ 0.68
SPIN3-204ENST00000638257 EEA1Q15075 1411 aa19.29■□□□□ 0.68
SPIN3-204ENST00000638257 CANXP27824 592 aaKnown RBP19.27■□□□□ 0.68
SPIN3-204ENST00000638257 FAM9BQ8IZU0 186 aa19.27■□□□□ 0.67
SPIN3-204ENST00000638257 SUPT16HQ9Y5B9 1047 aaKnown RBP19.24■□□□□ 0.67
SPIN3-204ENST00000638257 CEP162Q5TB80 1403 aa19.23■□□□□ 0.67
SPIN3-204ENST00000638257 CLIP1P30622 1438 aa19.22■□□□□ 0.67
SPIN3-204ENST00000638257 PABPN1Q86U42 306 aaKnown RBP eCLIP19.2■□□□□ 0.66
SPIN3-204ENST00000638257 ANP32BQ92688 251 aaKnown RBP19.2■□□□□ 0.66
SPIN3-204ENST00000638257 UPF2Q9HAU5 1272 aaKnown RBP19.18■□□□□ 0.66
SPIN3-204ENST00000638257 MRS2Q9HD23 443 aa19.18■□□□□ 0.66
SPIN3-204ENST00000638257 SCRIBQ14160 1630 aa19.15■□□□□ 0.66
SPIN3-204ENST00000638257 TNIKQ9UKE5 1360 aa19.15■□□□□ 0.66
SPIN3-204ENST00000638257 P3H3Q8IVL6 736 aa19.15■□□□□ 0.66
SPIN3-204ENST00000638257 GOLGA3Q08378 1498 aa19.14■□□□□ 0.66
SPIN3-204ENST00000638257 BCL11AQ9H165 835 aa19.14■□□□□ 0.65
SPIN3-204ENST00000638257 RSF1Q96T23 1441 aaPredicted RBP19.13■□□□□ 0.65
SPIN3-204ENST00000638257 TMC1Q8TDI8 760 aa19.12■□□□□ 0.65
SPIN3-204ENST00000638257 IRX6P78412 446 aaPredicted RBP19.11■□□□□ 0.65
SPIN3-204ENST00000638257 DDRGK1Q96HY6 314 aa19.1■□□□□ 0.65
SPIN3-204ENST00000638257 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.09■□□□□ 0.65
SPIN3-204ENST00000638257 EIF4G2P78344 907 aaKnown RBP eCLIP19.06■□□□□ 0.64
SPIN3-204ENST00000638257 PPP4R2Q9NY27 417 aa19.06■□□□□ 0.64
SPIN3-204ENST00000638257 PPM1GO15355 546 aaPredicted RBP19.04■□□□□ 0.64
SPIN3-204ENST00000638257 NEFMP07197 916 aa18.99■□□□□ 0.63
SPIN3-204ENST00000638257 HSP90AA1P07900 732 aaKnown RBP18.99■□□□□ 0.63
SPIN3-204ENST00000638257 NOP58Q9Y2X3 529 aaKnown RBP18.98■□□□□ 0.63
SPIN3-204ENST00000638257 RBM19Q9Y4C8 960 aaKnown RBP18.96■□□□□ 0.63
SPIN3-204ENST00000638257 HIRIP3Q9BW71 556 aaPredicted RBP18.95■□□□□ 0.62
SPIN3-204ENST00000638257 CCER2I3L3R5 266 aa18.93■□□□□ 0.62
SPIN3-204ENST00000638257 CEP164Q9UPV0 1460 aa18.93■□□□□ 0.62
SPIN3-204ENST00000638257 TIMELESSQ9UNS1 1208 aa18.93■□□□□ 0.62
SPIN3-204ENST00000638257 ERICH6BQ5W0A0 696 aa18.92■□□□□ 0.62
SPIN3-204ENST00000638257 BECN1Q14457 450 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms