Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 ATP6V0CP2-201ENST00000469409 207 ntBASIC13.6□□□□□ -0.23
RNFT1Q5M7Z0 SERPINA13P-202ENST00000478994 924 ntBASIC13.6□□□□□ -0.23
RNFT1Q5M7Z0 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC13.6□□□□□ -0.23
RNFT1Q5M7Z0 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC13.6□□□□□ -0.23
RNFT1Q5M7Z0 AL139317.3-201ENST00000555969 898 ntTSL 2 BASIC13.6□□□□□ -0.23
RNFT1Q5M7Z0 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC13.6□□□□□ -0.23
RNFT1Q5M7Z0 NAT9-222ENST00000583476 583 ntTSL 3 BASIC13.6□□□□□ -0.23
RNFT1Q5M7Z0 RPS15-202ENST00000585665 467 ntTSL 3 BASIC13.6□□□□□ -0.23
RNFT1Q5M7Z0 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC13.6□□□□□ -0.23
RNFT1Q5M7Z0 AC138696.2-201ENST00000607376 223 ntBASIC13.6□□□□□ -0.23
RNFT1Q5M7Z0 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC13.6□□□□□ -0.23
RNFT1Q5M7Z0 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
RNFT1Q5M7Z0 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC13.6□□□□□ -0.23
RNFT1Q5M7Z0 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RNFT1Q5M7Z0 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
RNFT1Q5M7Z0 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RNFT1Q5M7Z0 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RNFT1Q5M7Z0 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RNFT1Q5M7Z0 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC13.6□□□□□ -0.23
RNFT1Q5M7Z0 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RNFT1Q5M7Z0 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC13.6□□□□□ -0.23
RNFT1Q5M7Z0 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RNFT1Q5M7Z0 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RNFT1Q5M7Z0 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RNFT1Q5M7Z0 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC13.59□□□□□ -0.23
RNFT1Q5M7Z0 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
RNFT1Q5M7Z0 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RNFT1Q5M7Z0 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RNFT1Q5M7Z0 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RNFT1Q5M7Z0 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
RNFT1Q5M7Z0 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
RNFT1Q5M7Z0 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC13.59□□□□□ -0.23
RNFT1Q5M7Z0 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
RNFT1Q5M7Z0 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RNFT1Q5M7Z0 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
RNFT1Q5M7Z0 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
RNFT1Q5M7Z0 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RNFT1Q5M7Z0 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC13.59□□□□□ -0.23
RNFT1Q5M7Z0 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC13.59□□□□□ -0.23
RNFT1Q5M7Z0 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC13.59□□□□□ -0.23
RNFT1Q5M7Z0 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC13.59□□□□□ -0.23
RNFT1Q5M7Z0 AC022748.3-201ENST00000621828 275 ntBASIC13.59□□□□□ -0.23
RNFT1Q5M7Z0 PPA1-206ENST00000625364 644 ntTSL 5 BASIC13.59□□□□□ -0.23
RNFT1Q5M7Z0 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
RNFT1Q5M7Z0 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RNFT1Q5M7Z0 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RNFT1Q5M7Z0 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC13.59□□□□□ -0.23
RNFT1Q5M7Z0 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC13.59□□□□□ -0.23
RNFT1Q5M7Z0 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC13.59□□□□□ -0.23
RNFT1Q5M7Z0 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RNFT1Q5M7Z0 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
RNFT1Q5M7Z0 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC13.59□□□□□ -0.23
RNFT1Q5M7Z0 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
RNFT1Q5M7Z0 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
RNFT1Q5M7Z0 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RNFT1Q5M7Z0 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC13.59□□□□□ -0.23
RNFT1Q5M7Z0 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RNFT1Q5M7Z0 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RNFT1Q5M7Z0 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RNFT1Q5M7Z0 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
RNFT1Q5M7Z0 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
RNFT1Q5M7Z0 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
RNFT1Q5M7Z0 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC13.59□□□□□ -0.23
RNFT1Q5M7Z0 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
RNFT1Q5M7Z0 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RNFT1Q5M7Z0 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RNFT1Q5M7Z0 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
RNFT1Q5M7Z0 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
RNFT1Q5M7Z0 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
RNFT1Q5M7Z0 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
RNFT1Q5M7Z0 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC13.58□□□□□ -0.23
RNFT1Q5M7Z0 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.23
RNFT1Q5M7Z0 AC023024.2-201ENST00000623561 1993 ntBASIC13.58□□□□□ -0.24
RNFT1Q5M7Z0 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC13.58□□□□□ -0.24
RNFT1Q5M7Z0 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
RNFT1Q5M7Z0 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
RNFT1Q5M7Z0 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RNFT1Q5M7Z0 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC13.58□□□□□ -0.24
RNFT1Q5M7Z0 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
RNFT1Q5M7Z0 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC13.58□□□□□ -0.24
RNFT1Q5M7Z0 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RNFT1Q5M7Z0 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RNFT1Q5M7Z0 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RNFT1Q5M7Z0 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RNFT1Q5M7Z0 RN7SKP230-201ENST00000365642 335 ntBASIC13.58□□□□□ -0.24
RNFT1Q5M7Z0 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
RNFT1Q5M7Z0 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
RNFT1Q5M7Z0 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC13.58□□□□□ -0.24
RNFT1Q5M7Z0 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC13.58□□□□□ -0.24
RNFT1Q5M7Z0 RNMTL1P1-201ENST00000454103 560 ntBASIC13.58□□□□□ -0.24
RNFT1Q5M7Z0 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
RNFT1Q5M7Z0 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC13.58□□□□□ -0.24
RNFT1Q5M7Z0 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
RNFT1Q5M7Z0 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC13.58□□□□□ -0.24
RNFT1Q5M7Z0 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RNFT1Q5M7Z0 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC13.58□□□□□ -0.24
RNFT1Q5M7Z0 DIO1-215ENST00000610607 796 ntTSL 5 BASIC13.58□□□□□ -0.24
RNFT1Q5M7Z0 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
RNFT1Q5M7Z0 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC13.58□□□□□ -0.24
RNFT1Q5M7Z0 AL136301.1-201ENST00000615830 422 ntBASIC13.58□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 128.6 ms