RNA–Protein interactions for RNA: ENST00000260502.10

BCAR3-201, Transcript of BCAR3, NSP family adaptor protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BCAR3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCAR3-201ENST00000260502 NISCHQ9Y2I1 1504 aa32.82■■■□□ 2.84
BCAR3-201ENST00000260502 SHROOM4Q9ULL8 1493 aa28.5■■■□□ 2.15
BCAR3-201ENST00000260502 DCAF8L2P0C7V8 631 aa28.12■■■□□ 2.09
BCAR3-201ENST00000260502 SUPT5HO00267 1087 aaKnown RBP27.9■■■□□ 2.06
BCAR3-201ENST00000260502 CCDC180Q9P1Z9 1646 aa27.69■■■□□ 2.02
BCAR3-201ENST00000260502 ZCCHC6Q5VYS8 1495 aaKnown RBP27.65■■■□□ 2.02
BCAR3-201ENST00000260502 CHIC1Q5VXU3 224 aa26.73■■□□□ 1.87
BCAR3-201ENST00000260502 DCAF1Q9Y4B6 1507 aa26.62■■□□□ 1.85
BCAR3-201ENST00000260502 MYO15BQ96JP2 1530 aa26.5■■□□□ 1.83
BCAR3-201ENST00000260502 ABCC9O60706 1549 aa26.45■■□□□ 1.83
BCAR3-201ENST00000260502 SCRIBQ14160 1630 aa26.39■■□□□ 1.82
BCAR3-201ENST00000260502 LOC105371045A0A1W2PR82 267 aa26.19■■□□□ 1.78
BCAR3-201ENST00000260502 RSF1Q96T23 1441 aaPredicted RBP26.02■■□□□ 1.76
BCAR3-201ENST00000260502 PCGF6Q9BYE7 350 aa25.97■■□□□ 1.75
BCAR3-201ENST00000260502 EHMT2Q96KQ7 1210 aa25.92■■□□□ 1.74
BCAR3-201ENST00000260502 FAM9AQ8IZU1 332 aaPredicted RBP25.89■■□□□ 1.74
BCAR3-201ENST00000260502 CECR2Q9BXF3 1484 aa25.84■■□□□ 1.73
BCAR3-201ENST00000260502 TRIM41Q8WV44 630 aa25.83■■□□□ 1.72
BCAR3-201ENST00000260502 NACADO15069 1562 aa25.79■■□□□ 1.72
BCAR3-201ENST00000260502 RB1CC1Q8TDY2 1594 aa25.72■■□□□ 1.71
BCAR3-201ENST00000260502 MROH2BQ7Z745 1585 aa25.63■■□□□ 1.69
BCAR3-201ENST00000260502 HRCP23327 699 aa25.54■■□□□ 1.68
BCAR3-201ENST00000260502 PABPN1Q86U42 306 aaKnown RBP eCLIP25.48■■□□□ 1.67
BCAR3-201ENST00000260502 WIZO95785 1651 aa25.48■■□□□ 1.67
BCAR3-201ENST00000260502 PPARGC1BQ86YN6 1023 aaKnown RBP25.38■■□□□ 1.65
BCAR3-201ENST00000260502 TRIM26Q12899 539 aaPredicted RBP25.24■■□□□ 1.63
BCAR3-201ENST00000260502 BAZ1AQ9NRL2 1556 aaPredicted RBP25.18■■□□□ 1.62
BCAR3-201ENST00000260502 UNC13AQ9UPW8 1703 aa25.06■■□□□ 1.6
BCAR3-201ENST00000260502 SMARCA4P51532 1647 aa25■■□□□ 1.59
BCAR3-201ENST00000260502 CCDC88BA6NC98 1476 aa24.99■■□□□ 1.59
BCAR3-201ENST00000260502 TTBK1Q5TCY1 1321 aaPredicted RBP24.97■■□□□ 1.59
BCAR3-201ENST00000260502 ABCC8Q09428 1581 aa24.97■■□□□ 1.59
BCAR3-201ENST00000260502 TOP2AP11388 1531 aaKnown RBP24.9■■□□□ 1.58
BCAR3-201ENST00000260502 SMARCA2P51531 1590 aa24.82■■□□□ 1.56
BCAR3-201ENST00000260502 BICRAQ9NZM4 1560 aa24.81■■□□□ 1.56
BCAR3-201ENST00000260502 SOGA1O94964 1423 aa24.74■■□□□ 1.55
BCAR3-201ENST00000260502 EIF4G1Q04637 1599 aaKnown RBP24.73■■□□□ 1.55
BCAR3-201ENST00000260502 UBTFP17480 764 aaKnown RBP24.73■■□□□ 1.55
BCAR3-201ENST00000260502 RUSC2Q8N2Y8 1516 aa24.64■■□□□ 1.54
BCAR3-201ENST00000260502 CSRNP3Q8WYN3 585 aa24.61■■□□□ 1.53
BCAR3-201ENST00000260502 RANGAP1P46060 587 aaPredicted RBP24.6■■□□□ 1.53
BCAR3-201ENST00000260502 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.55■■□□□ 1.52
BCAR3-201ENST00000260502 ATAD2BQ9ULI0 1458 aa24.5■■□□□ 1.51
BCAR3-201ENST00000260502 WRNQ14191 1432 aaPredicted RBP eCLIP24.49■■□□□ 1.51
BCAR3-201ENST00000260502 BAZ1BQ9UIG0 1483 aaKnown RBP24.49■■□□□ 1.51
BCAR3-201ENST00000260502 ZEB1P37275 1124 aaPredicted RBP24.47■■□□□ 1.51
BCAR3-201ENST00000260502 CEP162Q5TB80 1403 aa24.45■■□□□ 1.51
BCAR3-201ENST00000260502 CCER1Q8TC90 406 aaPredicted RBP24.42■■□□□ 1.5
BCAR3-201ENST00000260502 TNIKQ9UKE5 1360 aa24.33■■□□□ 1.48
BCAR3-201ENST00000260502 PEG3Q9GZU2 1588 aa24.32■■□□□ 1.48
BCAR3-201ENST00000260502 SYNJ1O43426 1573 aa24.3■■□□□ 1.48
BCAR3-201ENST00000260502 EEA1Q15075 1411 aa24.24■■□□□ 1.47
BCAR3-201ENST00000260502 GOLGA3Q08378 1498 aa24.22■■□□□ 1.47
BCAR3-201ENST00000260502 HNRNPUL2Q1KMD3 747 aaKnown RBP24.13■■□□□ 1.45
BCAR3-201ENST00000260502 APLP2Q06481 763 aa24.08■■□□□ 1.45
BCAR3-201ENST00000260502 CEP164Q9UPV0 1460 aa24.08■■□□□ 1.45
BCAR3-201ENST00000260502 RAPGEF2Q9Y4G8 1499 aa24.08■■□□□ 1.44
BCAR3-201ENST00000260502 CLIP1P30622 1438 aa24.07■■□□□ 1.44
BCAR3-201ENST00000260502 PELP1Q8IZL8 1130 aaKnown RBP23.97■■□□□ 1.43
BCAR3-201ENST00000260502 NCAPD3P42695 1498 aa23.96■■□□□ 1.43
BCAR3-201ENST00000260502 SCAF1Q9H7N4 1312 aaKnown RBP23.95■■□□□ 1.43
BCAR3-201ENST00000260502 TOP2BQ02880 1626 aa23.88■■□□□ 1.41
BCAR3-201ENST00000260502 KIF21BO75037 1637 aa23.87■■□□□ 1.41
BCAR3-201ENST00000260502 CUX1P39880 1505 aa23.82■■□□□ 1.4
BCAR3-201ENST00000260502 VPS8Q8N3P4 1428 aa23.82■■□□□ 1.4
BCAR3-201ENST00000260502 HMGXB3Q12766 1538 aa23.82■■□□□ 1.4
BCAR3-201ENST00000260502 CFTRP13569 1480 aa23.75■■□□□ 1.39
BCAR3-201ENST00000260502 KIF27Q86VH2 1401 aa23.74■■□□□ 1.39
BCAR3-201ENST00000260502 KANK4Q5T7N3 995 aaPredicted RBP23.73■■□□□ 1.39
BCAR3-201ENST00000260502 DIEXFQ68CQ4 756 aaKnown RBP23.73■■□□□ 1.39
BCAR3-201ENST00000260502 BIVM-ERCC5R4GMW8 1640 aa23.71■■□□□ 1.39
BCAR3-201ENST00000260502 ITGAEP38570 1179 aa23.69■■□□□ 1.38
BCAR3-201ENST00000260502 PRXQ9BXM0 1461 aa23.67■■□□□ 1.38
BCAR3-201ENST00000260502 CADPSQ9ULU8 1353 aa23.65■■□□□ 1.38
BCAR3-201ENST00000260502 P3H3Q8IVL6 736 aa23.65■■□□□ 1.38
BCAR3-201ENST00000260502 ATP1B4Q9UN42 357 aaPredicted RBP23.64■■□□□ 1.38
BCAR3-201ENST00000260502 CUX2O14529 1486 aa23.64■■□□□ 1.38
BCAR3-201ENST00000260502 ARAP1Q96P48 1450 aa23.58■■□□□ 1.37
BCAR3-201ENST00000260502 CC2D2AQ9P2K1 1620 aa23.57■■□□□ 1.36
BCAR3-201ENST00000260502 IGF1RP08069 1367 aa23.54■■□□□ 1.36
BCAR3-201ENST00000260502 ERICH3Q5RHP9 1530 aa23.53■■□□□ 1.36
BCAR3-201ENST00000260502 ZNF316A6NFI3 1004 aaPredicted RBP23.52■■□□□ 1.36
BCAR3-201ENST00000260502 FGD5Q6ZNL6 1462 aa23.5■■□□□ 1.35
BCAR3-201ENST00000260502 DNAJC5BQ9UF47 199 aa23.5■■□□□ 1.35
BCAR3-201ENST00000260502 CARMIL1Q5VZK9 1371 aa23.48■■□□□ 1.35
BCAR3-201ENST00000260502 NESP48681 1621 aa23.47■■□□□ 1.35
BCAR3-201ENST00000260502 YTHDC1Q96MU7 727 aaKnown RBP23.45■■□□□ 1.34
BCAR3-201ENST00000260502 ARHGAP35Q9NRY4 1499 aa23.44■■□□□ 1.34
BCAR3-201ENST00000260502 NEUROD1Q13562 356 aa23.44■■□□□ 1.34
BCAR3-201ENST00000260502 FANCD2Q9BXW9 1451 aa23.43■■□□□ 1.34
BCAR3-201ENST00000260502 ACIN1Q9UKV3 1341 aaKnown RBP23.42■■□□□ 1.34
BCAR3-201ENST00000260502 RAD54L2Q9Y4B4 1467 aa23.42■■□□□ 1.34
BCAR3-201ENST00000260502 FAM50AQ14320 339 aaKnown RBP23.32■■□□□ 1.32
BCAR3-201ENST00000260502 MIER1Q8N108 512 aa23.29■■□□□ 1.32
BCAR3-201ENST00000260502 GTF3C3Q9Y5Q9 886 aa23.29■■□□□ 1.32
BCAR3-201ENST00000260502 CCNB3Q8WWL7 1395 aa23.26■■□□□ 1.31
BCAR3-201ENST00000260502 PRDM2Q13029 1718 aa23.26■■□□□ 1.31
BCAR3-201ENST00000260502 DHX57Q6P158 1386 aaKnown RBP23.25■■□□□ 1.31
BCAR3-201ENST00000260502 TDRD9Q8NDG6 1382 aaKnown RBP23.25■■□□□ 1.31
BCAR3-201ENST00000260502 CENPBP07199 599 aaPredicted RBP23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms