RNA–Protein interactions for RNA: ENST00000544118.5

CYB561A3-219, Transcript of cytochrome b561 family member A3, humanhuman

TSL 5 BASIC

Gene CYB561A3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-219ENST00000544118 NISCHQ9Y2I1 1504 aa36.18■■■■□ 3.38
CYB561A3-219ENST00000544118 CCDC180Q9P1Z9 1646 aa32.39■■■□□ 2.78
CYB561A3-219ENST00000544118 ABCC9O60706 1549 aa32.36■■■□□ 2.77
CYB561A3-219ENST00000544118 RB1CC1Q8TDY2 1594 aa30.85■■■□□ 2.53
CYB561A3-219ENST00000544118 NACADO15069 1562 aa30.67■■■□□ 2.5
CYB561A3-219ENST00000544118 DCAF8L2P0C7V8 631 aa30.6■■■□□ 2.49
CYB561A3-219ENST00000544118 DNAJC5BQ9UF47 199 aa30.3■■■□□ 2.44
CYB561A3-219ENST00000544118 MYO15BQ96JP2 1530 aa30.29■■■□□ 2.44
CYB561A3-219ENST00000544118 PABPN1Q86U42 306 aaKnown RBP eCLIP30.18■■■□□ 2.42
CYB561A3-219ENST00000544118 UNC13AQ9UPW8 1703 aa30■■■□□ 2.39
CYB561A3-219ENST00000544118 ZCCHC6Q5VYS8 1495 aaKnown RBP29.99■■■□□ 2.39
CYB561A3-219ENST00000544118 DCAF1Q9Y4B6 1507 aa29.91■■■□□ 2.38
CYB561A3-219ENST00000544118 BICRAQ9NZM4 1560 aa29.88■■■□□ 2.37
CYB561A3-219ENST00000544118 SHROOM4Q9ULL8 1493 aa29.59■■■□□ 2.33
CYB561A3-219ENST00000544118 SCRIBQ14160 1630 aa29.51■■■□□ 2.31
CYB561A3-219ENST00000544118 CC2D2AQ9P2K1 1620 aa29.2■■■□□ 2.27
CYB561A3-219ENST00000544118 EIF4G1Q04637 1599 aaKnown RBP29.18■■■□□ 2.26
CYB561A3-219ENST00000544118 CECR2Q9BXF3 1484 aa29.17■■■□□ 2.26
CYB561A3-219ENST00000544118 NCAPD3P42695 1498 aa28.34■■■□□ 2.13
CYB561A3-219ENST00000544118 ATAD2BQ9ULI0 1458 aa28.23■■■□□ 2.11
CYB561A3-219ENST00000544118 SMARCA4P51532 1647 aa28.17■■■□□ 2.1
CYB561A3-219ENST00000544118 SMARCA2P51531 1590 aa28.16■■■□□ 2.1
CYB561A3-219ENST00000544118 BAZ1AQ9NRL2 1556 aaPredicted RBP28.1■■■□□ 2.09
CYB561A3-219ENST00000544118 HMGXB3Q12766 1538 aa28.08■■■□□ 2.09
CYB561A3-219ENST00000544118 ERCC6Q03468 1493 aa27.98■■■□□ 2.07
CYB561A3-219ENST00000544118 BAZ1BQ9UIG0 1483 aaKnown RBP27.97■■■□□ 2.07
CYB561A3-219ENST00000544118 PEG3Q9GZU2 1588 aa27.93■■■□□ 2.06
CYB561A3-219ENST00000544118 CUX2O14529 1486 aa27.9■■■□□ 2.06
CYB561A3-219ENST00000544118 MROH2BQ7Z745 1585 aa27.86■■■□□ 2.05
CYB561A3-219ENST00000544118 DNAJC5Q9H3Z4 198 aa27.84■■■□□ 2.05
CYB561A3-219ENST00000544118 NESP48681 1621 aa27.79■■■□□ 2.04
CYB561A3-219ENST00000544118 LAMC3Q9Y6N6 1575 aa27.65■■■□□ 2.02
CYB561A3-219ENST00000544118 PDS5BQ9NTI5 1447 aa27.55■■■□□ 2
CYB561A3-219ENST00000544118 CADPSQ9ULU8 1353 aa27.49■■□□□ 1.99
CYB561A3-219ENST00000544118 WIZO95785 1651 aa27.49■■□□□ 1.99
CYB561A3-219ENST00000544118 THOC2Q8NI27 1593 aaKnown RBP27.47■■□□□ 1.99
CYB561A3-219ENST00000544118 KIF21AQ7Z4S6 1674 aa27.38■■□□□ 1.97
CYB561A3-219ENST00000544118 RSF1Q96T23 1441 aaPredicted RBP27.35■■□□□ 1.97
CYB561A3-219ENST00000544118 MRC2Q9UBG0 1479 aa27.26■■□□□ 1.95
CYB561A3-219ENST00000544118 TOP2AP11388 1531 aaKnown RBP27.2■■□□□ 1.94
CYB561A3-219ENST00000544118 CFTRP13569 1480 aa27.17■■□□□ 1.94
CYB561A3-219ENST00000544118 CEP164Q9UPV0 1460 aa27.17■■□□□ 1.94
CYB561A3-219ENST00000544118 WDR62O43379 1518 aa27.16■■□□□ 1.94
CYB561A3-219ENST00000544118 FANCD2Q9BXW9 1451 aa27.14■■□□□ 1.94
CYB561A3-219ENST00000544118 CCDC88BA6NC98 1476 aa26.91■■□□□ 1.9
CYB561A3-219ENST00000544118 URB2Q14146 1524 aaKnown RBP26.88■■□□□ 1.89
CYB561A3-219ENST00000544118 PRDM2Q13029 1718 aa26.77■■□□□ 1.88
CYB561A3-219ENST00000544118 OSCARQ8IYS5 282 aa26.71■■□□□ 1.87
CYB561A3-219ENST00000544118 IFT140Q96RY7 1462 aa26.65■■□□□ 1.86
CYB561A3-219ENST00000544118 ABCC8Q09428 1581 aa26.64■■□□□ 1.86
CYB561A3-219ENST00000544118 TRIM41Q8WV44 630 aa26.63■■□□□ 1.85
CYB561A3-219ENST00000544118 TOPBP1Q92547 1522 aa26.62■■□□□ 1.85
CYB561A3-219ENST00000544118 ZNF608Q9ULD9 1512 aaPredicted RBP26.54■■□□□ 1.84
CYB561A3-219ENST00000544118 DNMBPQ6XZF7 1577 aa26.52■■□□□ 1.84
CYB561A3-219ENST00000544118 EIF4G3O43432 1585 aaKnown RBP26.36■■□□□ 1.81
CYB561A3-219ENST00000544118 POLA1P09884 1462 aaPredicted RBP26.35■■□□□ 1.81
CYB561A3-219ENST00000544118 TARBP1Q13395 1621 aaKnown RBP26.34■■□□□ 1.81
CYB561A3-219ENST00000544118 AQRO60306 1485 aaKnown RBP eCLIP26.34■■□□□ 1.81
CYB561A3-219ENST00000544118 SOGA1O94964 1423 aa26.29■■□□□ 1.8
CYB561A3-219ENST00000544118 RAD54L2Q9Y4B4 1467 aa26.25■■□□□ 1.79
CYB561A3-219ENST00000544118 SUPT5HO00267 1087 aaKnown RBP26.24■■□□□ 1.79
CYB561A3-219ENST00000544118 FBLN2P98095 1184 aa26.21■■□□□ 1.79
CYB561A3-219ENST00000544118 RIMBP3CA6NJZ7 1639 aa26.21■■□□□ 1.79
CYB561A3-219ENST00000544118 RIMBP3BA6NNM3 1639 aa26.21■■□□□ 1.79
CYB561A3-219ENST00000544118 RIMBP3Q9UFD9 1639 aa26.21■■□□□ 1.79
CYB561A3-219ENST00000544118 TDRD9Q8NDG6 1382 aaKnown RBP26.2■■□□□ 1.79
CYB561A3-219ENST00000544118 FGD5Q6ZNL6 1462 aa26.2■■□□□ 1.78
CYB561A3-219ENST00000544118 ARHGEF11O15085 1522 aa26.17■■□□□ 1.78
CYB561A3-219ENST00000544118 CUX1P39880 1505 aa26.16■■□□□ 1.78
CYB561A3-219ENST00000544118 WDR97A6NE52 1622 aa26.13■■□□□ 1.77
CYB561A3-219ENST00000544118 CHD1O14646 1710 aa26.11■■□□□ 1.77
CYB561A3-219ENST00000544118 SNAPC4Q5SXM2 1469 aa26.05■■□□□ 1.76
CYB561A3-219ENST00000544118 CYB5RLQ6IPT4 315 aa26.05■■□□□ 1.76
CYB561A3-219ENST00000544118 CHMP7Q8WUX9 453 aaPredicted RBP26.05■■□□□ 1.76
CYB561A3-219ENST00000544118 GRIN2BQ13224 1484 aa26.04■■□□□ 1.76
CYB561A3-219ENST00000544118 MAGI1Q96QZ7 1491 aaPredicted RBP26.03■■□□□ 1.76
CYB561A3-219ENST00000544118 GAPVD1Q14C86 1478 aa25.95■■□□□ 1.74
CYB561A3-219ENST00000544118 SYNJ2O15056 1496 aa25.93■■□□□ 1.74
CYB561A3-219ENST00000544118 ABCA10Q8WWZ4 1543 aa25.93■■□□□ 1.74
CYB561A3-219ENST00000544118 ARAP1Q96P48 1450 aa25.91■■□□□ 1.74
CYB561A3-219ENST00000544118 SYNJ1O43426 1573 aa25.9■■□□□ 1.74
CYB561A3-219ENST00000544118 CLASP1Q7Z460 1538 aa25.88■■□□□ 1.73
CYB561A3-219ENST00000544118 WRNQ14191 1432 aaPredicted RBP eCLIP25.88■■□□□ 1.73
CYB561A3-219ENST00000544118 PBRM1Q86U86 1689 aa25.82■■□□□ 1.72
CYB561A3-219ENST00000544118 ABCA5Q8WWZ7 1642 aa25.81■■□□□ 1.72
CYB561A3-219ENST00000544118 TOP2BQ02880 1626 aa25.77■■□□□ 1.72
CYB561A3-219ENST00000544118 TRHP20396 242 aaPredicted RBP25.76■■□□□ 1.71
CYB561A3-219ENST00000544118 BIVM-ERCC5R4GMW8 1640 aa25.74■■□□□ 1.71
CYB561A3-219ENST00000544118 GRIN2AQ12879 1464 aa25.68■■□□□ 1.7
CYB561A3-219ENST00000544118 FHAD1B1AJZ9 1412 aa25.64■■□□□ 1.7
CYB561A3-219ENST00000544118 ADAMTS12P58397 1594 aa25.62■■□□□ 1.69
CYB561A3-219ENST00000544118 ERICH3Q5RHP9 1530 aa25.6■■□□□ 1.69
CYB561A3-219ENST00000544118 NUP160Q12769 1436 aa25.6■■□□□ 1.69
CYB561A3-219ENST00000544118 CEP170Q5SW79 1584 aa25.53■■□□□ 1.68
CYB561A3-219ENST00000544118 ERCC6L2Q5T890 1561 aa25.44■■□□□ 1.66
CYB561A3-219ENST00000544118 SHROOM2Q13796 1616 aa25.41■■□□□ 1.66
CYB561A3-219ENST00000544118 JPH4Q96JJ6 628 aa25.4■■□□□ 1.66
CYB561A3-219ENST00000544118 PRG4Q92954 1404 aaPredicted RBP25.37■■□□□ 1.65
CYB561A3-219ENST00000544118 KIF27Q86VH2 1401 aa25.36■■□□□ 1.65
CYB561A3-219ENST00000544118 IGF1RP08069 1367 aa25.32■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms