RNA–Protein interactions for RNA: ENST00000536184.6

VAC14-202, Transcript of Vac14, PIKFYVE complex component, humanhuman

TSL 2 BASIC

Gene VAC14, Length 2,161 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-202ENST00000536184 NISCHQ9Y2I1 1504 aa34.73■■■■□ 3.15
VAC14-202ENST00000536184 CCDC180Q9P1Z9 1646 aa30.3■■■□□ 2.44
VAC14-202ENST00000536184 ZCCHC6Q5VYS8 1495 aaKnown RBP29.12■■■□□ 2.25
VAC14-202ENST00000536184 ABCC9O60706 1549 aa29.01■■■□□ 2.23
VAC14-202ENST00000536184 DCAF8L2P0C7V8 631 aa28.95■■■□□ 2.23
VAC14-202ENST00000536184 DCAF1Q9Y4B6 1507 aa28.63■■■□□ 2.17
VAC14-202ENST00000536184 SHROOM4Q9ULL8 1493 aa28.37■■■□□ 2.13
VAC14-202ENST00000536184 MYO15BQ96JP2 1530 aa28.34■■■□□ 2.13
VAC14-202ENST00000536184 NACADO15069 1562 aa28.29■■■□□ 2.12
VAC14-202ENST00000536184 RB1CC1Q8TDY2 1594 aa28.12■■■□□ 2.09
VAC14-202ENST00000536184 SCRIBQ14160 1630 aa27.97■■■□□ 2.07
VAC14-202ENST00000536184 UNC13AQ9UPW8 1703 aa27.6■■■□□ 2.01
VAC14-202ENST00000536184 PABPN1Q86U42 306 aaKnown RBP eCLIP27.38■■□□□ 1.97
VAC14-202ENST00000536184 BICRAQ9NZM4 1560 aa27.32■■□□□ 1.96
VAC14-202ENST00000536184 SUPT5HO00267 1087 aaKnown RBP27.19■■□□□ 1.94
VAC14-202ENST00000536184 CECR2Q9BXF3 1484 aa27.08■■□□□ 1.93
VAC14-202ENST00000536184 RSF1Q96T23 1441 aaPredicted RBP26.9■■□□□ 1.9
VAC14-202ENST00000536184 MROH2BQ7Z745 1585 aa26.87■■□□□ 1.89
VAC14-202ENST00000536184 BAZ1AQ9NRL2 1556 aaPredicted RBP26.82■■□□□ 1.88
VAC14-202ENST00000536184 SMARCA4P51532 1647 aa26.74■■□□□ 1.87
VAC14-202ENST00000536184 WIZO95785 1651 aa26.65■■□□□ 1.86
VAC14-202ENST00000536184 EIF4G1Q04637 1599 aaKnown RBP26.52■■□□□ 1.84
VAC14-202ENST00000536184 ATAD2BQ9ULI0 1458 aa26.37■■□□□ 1.81
VAC14-202ENST00000536184 PEG3Q9GZU2 1588 aa26.37■■□□□ 1.81
VAC14-202ENST00000536184 SMARCA2P51531 1590 aa26.3■■□□□ 1.8
VAC14-202ENST00000536184 TOP2AP11388 1531 aaKnown RBP26.3■■□□□ 1.8
VAC14-202ENST00000536184 BAZ1BQ9UIG0 1483 aaKnown RBP26.22■■□□□ 1.79
VAC14-202ENST00000536184 CC2D2AQ9P2K1 1620 aa26.19■■□□□ 1.78
VAC14-202ENST00000536184 DNAJC5BQ9UF47 199 aa26.16■■□□□ 1.78
VAC14-202ENST00000536184 NCAPD3P42695 1498 aa26.14■■□□□ 1.78
VAC14-202ENST00000536184 CCDC88BA6NC98 1476 aa26.08■■□□□ 1.77
VAC14-202ENST00000536184 HMGXB3Q12766 1538 aa26.06■■□□□ 1.76
VAC14-202ENST00000536184 CHIC1Q5VXU3 224 aa25.85■■□□□ 1.73
VAC14-202ENST00000536184 CFTRP13569 1480 aa25.53■■□□□ 1.68
VAC14-202ENST00000536184 TRIM41Q8WV44 630 aa25.52■■□□□ 1.68
VAC14-202ENST00000536184 ABCC8Q09428 1581 aa25.52■■□□□ 1.68
VAC14-202ENST00000536184 CADPSQ9ULU8 1353 aa25.5■■□□□ 1.67
VAC14-202ENST00000536184 NESP48681 1621 aa25.41■■□□□ 1.66
VAC14-202ENST00000536184 WRNQ14191 1432 aaPredicted RBP eCLIP25.33■■□□□ 1.65
VAC14-202ENST00000536184 PRDM2Q13029 1718 aa25.32■■□□□ 1.64
VAC14-202ENST00000536184 LAMC3Q9Y6N6 1575 aa25.28■■□□□ 1.64
VAC14-202ENST00000536184 SYNJ1O43426 1573 aa25.24■■□□□ 1.63
VAC14-202ENST00000536184 FANCD2Q9BXW9 1451 aa25.23■■□□□ 1.63
VAC14-202ENST00000536184 FAM9AQ8IZU1 332 aaPredicted RBP25.14■■□□□ 1.62
VAC14-202ENST00000536184 CUX1P39880 1505 aa25.13■■□□□ 1.61
VAC14-202ENST00000536184 PDS5BQ9NTI5 1447 aa25.12■■□□□ 1.61
VAC14-202ENST00000536184 TOP2BQ02880 1626 aa25.1■■□□□ 1.61
VAC14-202ENST00000536184 CEP164Q9UPV0 1460 aa25.07■■□□□ 1.6
VAC14-202ENST00000536184 BIVM-ERCC5R4GMW8 1640 aa25.06■■□□□ 1.6
VAC14-202ENST00000536184 KIF21AQ7Z4S6 1674 aa25.05■■□□□ 1.6
VAC14-202ENST00000536184 SOGA1O94964 1423 aa25■■□□□ 1.59
VAC14-202ENST00000536184 LOC105371045A0A1W2PR82 267 aa24.94■■□□□ 1.58
VAC14-202ENST00000536184 RUSC2Q8N2Y8 1516 aa24.93■■□□□ 1.58
VAC14-202ENST00000536184 URB2Q14146 1524 aaKnown RBP24.93■■□□□ 1.58
VAC14-202ENST00000536184 TOPBP1Q92547 1522 aa24.92■■□□□ 1.58
VAC14-202ENST00000536184 DNMBPQ6XZF7 1577 aa24.92■■□□□ 1.58
VAC14-202ENST00000536184 FGD5Q6ZNL6 1462 aa24.89■■□□□ 1.58
VAC14-202ENST00000536184 EHMT2Q96KQ7 1210 aa24.87■■□□□ 1.57
VAC14-202ENST00000536184 ERCC6Q03468 1493 aa24.87■■□□□ 1.57
VAC14-202ENST00000536184 POLA1P09884 1462 aaPredicted RBP24.8■■□□□ 1.56
VAC14-202ENST00000536184 MRC2Q9UBG0 1479 aa24.8■■□□□ 1.56
VAC14-202ENST00000536184 EEA1Q15075 1411 aa24.77■■□□□ 1.56
VAC14-202ENST00000536184 CSRNP3Q8WYN3 585 aa24.77■■□□□ 1.56
VAC14-202ENST00000536184 RAD54L2Q9Y4B4 1467 aa24.76■■□□□ 1.55
VAC14-202ENST00000536184 CUX2O14529 1486 aa24.7■■□□□ 1.55
VAC14-202ENST00000536184 KIF27Q86VH2 1401 aa24.69■■□□□ 1.54
VAC14-202ENST00000536184 WDR62O43379 1518 aa24.66■■□□□ 1.54
VAC14-202ENST00000536184 THOC2Q8NI27 1593 aaKnown RBP24.65■■□□□ 1.54
VAC14-202ENST00000536184 ABCA10Q8WWZ4 1543 aa24.62■■□□□ 1.53
VAC14-202ENST00000536184 TDRD9Q8NDG6 1382 aaKnown RBP24.55■■□□□ 1.52
VAC14-202ENST00000536184 TARBP1Q13395 1621 aaKnown RBP24.55■■□□□ 1.52
VAC14-202ENST00000536184 WDR97A6NE52 1622 aa24.54■■□□□ 1.52
VAC14-202ENST00000536184 IGF1RP08069 1367 aa24.52■■□□□ 1.52
VAC14-202ENST00000536184 UBTFP17480 764 aaKnown RBP24.49■■□□□ 1.51
VAC14-202ENST00000536184 RAPGEF2Q9Y4G8 1499 aa24.48■■□□□ 1.51
VAC14-202ENST00000536184 KIF21BO75037 1637 aa24.48■■□□□ 1.51
VAC14-202ENST00000536184 GOLGA3Q08378 1498 aa24.48■■□□□ 1.51
VAC14-202ENST00000536184 IFT140Q96RY7 1462 aa24.46■■□□□ 1.51
VAC14-202ENST00000536184 PRXQ9BXM0 1461 aa24.46■■□□□ 1.51
VAC14-202ENST00000536184 GAPVD1Q14C86 1478 aa24.43■■□□□ 1.5
VAC14-202ENST00000536184 ABCA5Q8WWZ7 1642 aa24.43■■□□□ 1.5
VAC14-202ENST00000536184 AQRO60306 1485 aaKnown RBP eCLIP24.42■■□□□ 1.5
VAC14-202ENST00000536184 ZNF608Q9ULD9 1512 aaPredicted RBP24.42■■□□□ 1.5
VAC14-202ENST00000536184 CARMIL1Q5VZK9 1371 aa24.39■■□□□ 1.5
VAC14-202ENST00000536184 TNIKQ9UKE5 1360 aa24.36■■□□□ 1.49
VAC14-202ENST00000536184 ERICH3Q5RHP9 1530 aa24.35■■□□□ 1.49
VAC14-202ENST00000536184 PBRM1Q86U86 1689 aa24.28■■□□□ 1.48
VAC14-202ENST00000536184 EIF4G3O43432 1585 aaKnown RBP24.28■■□□□ 1.48
VAC14-202ENST00000536184 CUL7Q14999 1698 aa24.27■■□□□ 1.48
VAC14-202ENST00000536184 CEP162Q5TB80 1403 aa24.26■■□□□ 1.47
VAC14-202ENST00000536184 RANGAP1P46060 587 aaPredicted RBP24.26■■□□□ 1.47
VAC14-202ENST00000536184 GRIN2BQ13224 1484 aa24.25■■□□□ 1.47
VAC14-202ENST00000536184 HRCP23327 699 aa24.24■■□□□ 1.47
VAC14-202ENST00000536184 SNAPC4Q5SXM2 1469 aa24.15■■□□□ 1.46
VAC14-202ENST00000536184 FHAD1B1AJZ9 1412 aa24.14■■□□□ 1.46
VAC14-202ENST00000536184 ADAMTS12P58397 1594 aa24.13■■□□□ 1.45
VAC14-202ENST00000536184 CLIP1P30622 1438 aa24.12■■□□□ 1.45
VAC14-202ENST00000536184 MAGI1Q96QZ7 1491 aaPredicted RBP24.05■■□□□ 1.44
VAC14-202ENST00000536184 PCGF6Q9BYE7 350 aa24.05■■□□□ 1.44
VAC14-202ENST00000536184 FBLN2P98095 1184 aa24.04■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms