RNA–Protein interactions for RNA: ENST00000403027.6

CNOT8-202, Transcript of CCR4-NOT transcription complex subunit 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT8, Length 2,604 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT8-202ENST00000403027 NISCHQ9Y2I1 1504 aa33.7■■■□□ 2.98
CNOT8-202ENST00000403027 CCDC180Q9P1Z9 1646 aa28.78■■■□□ 2.2
CNOT8-202ENST00000403027 SHROOM4Q9ULL8 1493 aa28.44■■■□□ 2.14
CNOT8-202ENST00000403027 ZCCHC6Q5VYS8 1495 aaKnown RBP28.39■■■□□ 2.14
CNOT8-202ENST00000403027 DCAF8L2P0C7V8 631 aa28.18■■■□□ 2.1
CNOT8-202ENST00000403027 SUPT5HO00267 1087 aaKnown RBP27.71■■■□□ 2.03
CNOT8-202ENST00000403027 DCAF1Q9Y4B6 1507 aa27.62■■■□□ 2.01
CNOT8-202ENST00000403027 ABCC9O60706 1549 aa27.15■■□□□ 1.94
CNOT8-202ENST00000403027 MYO15BQ96JP2 1530 aa27■■□□□ 1.91
CNOT8-202ENST00000403027 SCRIBQ14160 1630 aa26.95■■□□□ 1.91
CNOT8-202ENST00000403027 NACADO15069 1562 aa26.77■■□□□ 1.88
CNOT8-202ENST00000403027 CHIC1Q5VXU3 224 aa26.7■■□□□ 1.87
CNOT8-202ENST00000403027 RSF1Q96T23 1441 aaPredicted RBP26.52■■□□□ 1.84
CNOT8-202ENST00000403027 RB1CC1Q8TDY2 1594 aa26.42■■□□□ 1.82
CNOT8-202ENST00000403027 CECR2Q9BXF3 1484 aa26.35■■□□□ 1.81
CNOT8-202ENST00000403027 MROH2BQ7Z745 1585 aa26.19■■□□□ 1.78
CNOT8-202ENST00000403027 UNC13AQ9UPW8 1703 aa26■■□□□ 1.75
CNOT8-202ENST00000403027 WIZO95785 1651 aa26■■□□□ 1.75
CNOT8-202ENST00000403027 LOC105371045A0A1W2PR82 267 aa25.94■■□□□ 1.74
CNOT8-202ENST00000403027 PABPN1Q86U42 306 aaKnown RBP eCLIP25.93■■□□□ 1.74
CNOT8-202ENST00000403027 BAZ1AQ9NRL2 1556 aaPredicted RBP25.9■■□□□ 1.74
CNOT8-202ENST00000403027 TRIM41Q8WV44 630 aa25.84■■□□□ 1.73
CNOT8-202ENST00000403027 BICRAQ9NZM4 1560 aa25.75■■□□□ 1.71
CNOT8-202ENST00000403027 SMARCA4P51532 1647 aa25.73■■□□□ 1.71
CNOT8-202ENST00000403027 FAM9AQ8IZU1 332 aaPredicted RBP25.62■■□□□ 1.69
CNOT8-202ENST00000403027 TOP2AP11388 1531 aaKnown RBP25.56■■□□□ 1.68
CNOT8-202ENST00000403027 PCGF6Q9BYE7 350 aa25.51■■□□□ 1.67
CNOT8-202ENST00000403027 CCDC88BA6NC98 1476 aa25.5■■□□□ 1.67
CNOT8-202ENST00000403027 EHMT2Q96KQ7 1210 aa25.43■■□□□ 1.66
CNOT8-202ENST00000403027 SMARCA2P51531 1590 aa25.42■■□□□ 1.66
CNOT8-202ENST00000403027 EIF4G1Q04637 1599 aaKnown RBP25.4■■□□□ 1.66
CNOT8-202ENST00000403027 ABCC8Q09428 1581 aa25.27■■□□□ 1.64
CNOT8-202ENST00000403027 HRCP23327 699 aa25.26■■□□□ 1.63
CNOT8-202ENST00000403027 PEG3Q9GZU2 1588 aa25.26■■□□□ 1.63
CNOT8-202ENST00000403027 ATAD2BQ9ULI0 1458 aa25.22■■□□□ 1.63
CNOT8-202ENST00000403027 PPARGC1BQ86YN6 1023 aaKnown RBP25.14■■□□□ 1.61
CNOT8-202ENST00000403027 BAZ1BQ9UIG0 1483 aaKnown RBP25.11■■□□□ 1.61
CNOT8-202ENST00000403027 TRIM26Q12899 539 aaPredicted RBP25■■□□□ 1.59
CNOT8-202ENST00000403027 SOGA1O94964 1423 aa24.98■■□□□ 1.59
CNOT8-202ENST00000403027 WRNQ14191 1432 aaPredicted RBP eCLIP24.91■■□□□ 1.58
CNOT8-202ENST00000403027 RUSC2Q8N2Y8 1516 aa24.89■■□□□ 1.57
CNOT8-202ENST00000403027 NCAPD3P42695 1498 aa24.82■■□□□ 1.56
CNOT8-202ENST00000403027 CSRNP3Q8WYN3 585 aa24.81■■□□□ 1.56
CNOT8-202ENST00000403027 SYNJ1O43426 1573 aa24.78■■□□□ 1.56
CNOT8-202ENST00000403027 HMGXB3Q12766 1538 aa24.72■■□□□ 1.55
CNOT8-202ENST00000403027 EEA1Q15075 1411 aa24.7■■□□□ 1.54
CNOT8-202ENST00000403027 UBTFP17480 764 aaKnown RBP24.68■■□□□ 1.54
CNOT8-202ENST00000403027 TNIKQ9UKE5 1360 aa24.61■■□□□ 1.53
CNOT8-202ENST00000403027 CEP162Q5TB80 1403 aa24.61■■□□□ 1.53
CNOT8-202ENST00000403027 GOLGA3Q08378 1498 aa24.52■■□□□ 1.52
CNOT8-202ENST00000403027 TOP2BQ02880 1626 aa24.5■■□□□ 1.51
CNOT8-202ENST00000403027 CFTRP13569 1480 aa24.49■■□□□ 1.51
CNOT8-202ENST00000403027 TTBK1Q5TCY1 1321 aaPredicted RBP24.46■■□□□ 1.51
CNOT8-202ENST00000403027 CEP164Q9UPV0 1460 aa24.44■■□□□ 1.5
CNOT8-202ENST00000403027 CC2D2AQ9P2K1 1620 aa24.42■■□□□ 1.5
CNOT8-202ENST00000403027 CUX1P39880 1505 aa24.39■■□□□ 1.5
CNOT8-202ENST00000403027 BIVM-ERCC5R4GMW8 1640 aa24.39■■□□□ 1.5
CNOT8-202ENST00000403027 RAPGEF2Q9Y4G8 1499 aa24.37■■□□□ 1.49
CNOT8-202ENST00000403027 KIF21BO75037 1637 aa24.36■■□□□ 1.49
CNOT8-202ENST00000403027 RANGAP1P46060 587 aaPredicted RBP24.34■■□□□ 1.49
CNOT8-202ENST00000403027 CADPSQ9ULU8 1353 aa24.33■■□□□ 1.49
CNOT8-202ENST00000403027 CLIP1P30622 1438 aa24.25■■□□□ 1.47
CNOT8-202ENST00000403027 ZEB1P37275 1124 aaPredicted RBP24.18■■□□□ 1.46
CNOT8-202ENST00000403027 KIF27Q86VH2 1401 aa24.18■■□□□ 1.46
CNOT8-202ENST00000403027 PRXQ9BXM0 1461 aa24.18■■□□□ 1.46
CNOT8-202ENST00000403027 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.15■■□□□ 1.46
CNOT8-202ENST00000403027 PRDM2Q13029 1718 aa24.14■■□□□ 1.45
CNOT8-202ENST00000403027 DNAJC5BQ9UF47 199 aa24.08■■□□□ 1.45
CNOT8-202ENST00000403027 VPS8Q8N3P4 1428 aa24.08■■□□□ 1.44
CNOT8-202ENST00000403027 NESP48681 1621 aa24.07■■□□□ 1.44
CNOT8-202ENST00000403027 ERICH3Q5RHP9 1530 aa24.07■■□□□ 1.44
CNOT8-202ENST00000403027 FANCD2Q9BXW9 1451 aa24.06■■□□□ 1.44
CNOT8-202ENST00000403027 CUX2O14529 1486 aa24.05■■□□□ 1.44
CNOT8-202ENST00000403027 FGD5Q6ZNL6 1462 aa24.03■■□□□ 1.44
CNOT8-202ENST00000403027 CCER1Q8TC90 406 aaPredicted RBP24.02■■□□□ 1.44
CNOT8-202ENST00000403027 IGF1RP08069 1367 aa24.01■■□□□ 1.43
CNOT8-202ENST00000403027 APLP2Q06481 763 aa23.99■■□□□ 1.43
CNOT8-202ENST00000403027 ARAP1Q96P48 1450 aa23.9■■□□□ 1.42
CNOT8-202ENST00000403027 RAD54L2Q9Y4B4 1467 aa23.88■■□□□ 1.41
CNOT8-202ENST00000403027 CARMIL1Q5VZK9 1371 aa23.88■■□□□ 1.41
CNOT8-202ENST00000403027 HNRNPUL2Q1KMD3 747 aaKnown RBP23.85■■□□□ 1.41
CNOT8-202ENST00000403027 TOPBP1Q92547 1522 aa23.85■■□□□ 1.41
CNOT8-202ENST00000403027 DNMBPQ6XZF7 1577 aa23.83■■□□□ 1.4
CNOT8-202ENST00000403027 POLA1P09884 1462 aaPredicted RBP23.83■■□□□ 1.4
CNOT8-202ENST00000403027 KANK4Q5T7N3 995 aaPredicted RBP23.8■■□□□ 1.4
CNOT8-202ENST00000403027 ARHGAP35Q9NRY4 1499 aa23.8■■□□□ 1.4
CNOT8-202ENST00000403027 LAMC3Q9Y6N6 1575 aa23.78■■□□□ 1.4
CNOT8-202ENST00000403027 URB2Q14146 1524 aaKnown RBP23.74■■□□□ 1.39
CNOT8-202ENST00000403027 ABCA10Q8WWZ4 1543 aa23.74■■□□□ 1.39
CNOT8-202ENST00000403027 PELP1Q8IZL8 1130 aaKnown RBP23.72■■□□□ 1.39
CNOT8-202ENST00000403027 PDS5BQ9NTI5 1447 aa23.69■■□□□ 1.38
CNOT8-202ENST00000403027 P3H3Q8IVL6 736 aa23.66■■□□□ 1.38
CNOT8-202ENST00000403027 TDRD9Q8NDG6 1382 aaKnown RBP23.65■■□□□ 1.38
CNOT8-202ENST00000403027 KIF21AQ7Z4S6 1674 aa23.57■■□□□ 1.36
CNOT8-202ENST00000403027 ATP1B4Q9UN42 357 aaPredicted RBP23.5■■□□□ 1.35
CNOT8-202ENST00000403027 GAPVD1Q14C86 1478 aa23.5■■□□□ 1.35
CNOT8-202ENST00000403027 WDR97A6NE52 1622 aa23.49■■□□□ 1.35
CNOT8-202ENST00000403027 FHOD3Q2V2M9 1422 aa23.47■■□□□ 1.35
CNOT8-202ENST00000403027 CUL7Q14999 1698 aa23.47■■□□□ 1.35
CNOT8-202ENST00000403027 RRBP1Q9P2E9 1410 aaKnown RBP23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms