RNA–Protein interactions for RNA: ENST00000370193.3

LBX1-201, Transcript of ladybird homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LBX1, Length 2,900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1-201ENST00000370193 NISCHQ9Y2I1 1504 aa32.98■■■□□ 2.87
LBX1-201ENST00000370193 SHROOM4Q9ULL8 1493 aa28.43■■■□□ 2.14
LBX1-201ENST00000370193 DCAF8L2P0C7V8 631 aa28.22■■■□□ 2.11
LBX1-201ENST00000370193 HRCP23327 699 aa28.12■■■□□ 2.09
LBX1-201ENST00000370193 SUPT5HO00267 1087 aaKnown RBP28.03■■■□□ 2.08
LBX1-201ENST00000370193 CCDC180Q9P1Z9 1646 aa27.98■■■□□ 2.07
LBX1-201ENST00000370193 ZCCHC6Q5VYS8 1495 aaKnown RBP27.75■■■□□ 2.03
LBX1-201ENST00000370193 PPARGC1BQ86YN6 1023 aaKnown RBP27.7■■■□□ 2.02
LBX1-201ENST00000370193 PCGF6Q9BYE7 350 aa27.63■■■□□ 2.01
LBX1-201ENST00000370193 PELP1Q8IZL8 1130 aaKnown RBP27.48■■□□□ 1.99
LBX1-201ENST00000370193 MYO15BQ96JP2 1530 aa27.43■■□□□ 1.98
LBX1-201ENST00000370193 CHIC1Q5VXU3 224 aa27.23■■□□□ 1.95
LBX1-201ENST00000370193 ABCC9O60706 1549 aa27■■□□□ 1.91
LBX1-201ENST00000370193 SCAF1Q9H7N4 1312 aaKnown RBP26.81■■□□□ 1.88
LBX1-201ENST00000370193 DCAF1Q9Y4B6 1507 aa26.76■■□□□ 1.87
LBX1-201ENST00000370193 LOC105371045A0A1W2PR82 267 aa26.72■■□□□ 1.87
LBX1-201ENST00000370193 SCRIBQ14160 1630 aa26.66■■□□□ 1.86
LBX1-201ENST00000370193 TRIM26Q12899 539 aaPredicted RBP26.6■■□□□ 1.85
LBX1-201ENST00000370193 MYT1Q01538 1121 aa26.46■■□□□ 1.83
LBX1-201ENST00000370193 ZEB1P37275 1124 aaPredicted RBP26.32■■□□□ 1.8
LBX1-201ENST00000370193 EHMT2Q96KQ7 1210 aa26.31■■□□□ 1.8
LBX1-201ENST00000370193 NACADO15069 1562 aa26.08■■□□□ 1.77
LBX1-201ENST00000370193 FAM9AQ8IZU1 332 aaPredicted RBP26.08■■□□□ 1.76
LBX1-201ENST00000370193 CECR2Q9BXF3 1484 aa26.05■■□□□ 1.76
LBX1-201ENST00000370193 RSF1Q96T23 1441 aaPredicted RBP26.03■■□□□ 1.76
LBX1-201ENST00000370193 ACIN1Q9UKV3 1341 aaKnown RBP26.01■■□□□ 1.75
LBX1-201ENST00000370193 NEUROD1Q13562 356 aa25.97■■□□□ 1.75
LBX1-201ENST00000370193 PABPN1Q86U42 306 aaKnown RBP eCLIP25.91■■□□□ 1.74
LBX1-201ENST00000370193 GTF3C3Q9Y5Q9 886 aa25.87■■□□□ 1.73
LBX1-201ENST00000370193 RB1CC1Q8TDY2 1594 aa25.85■■□□□ 1.73
LBX1-201ENST00000370193 MROH2BQ7Z745 1585 aa25.8■■□□□ 1.72
LBX1-201ENST00000370193 TRIM41Q8WV44 630 aa25.69■■□□□ 1.7
LBX1-201ENST00000370193 WIZO95785 1651 aa25.65■■□□□ 1.7
LBX1-201ENST00000370193 CENPBP07199 599 aaPredicted RBP25.62■■□□□ 1.69
LBX1-201ENST00000370193 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.6■■□□□ 1.69
LBX1-201ENST00000370193 UNC13AQ9UPW8 1703 aa25.59■■□□□ 1.69
LBX1-201ENST00000370193 DIEXFQ68CQ4 756 aaKnown RBP25.53■■□□□ 1.68
LBX1-201ENST00000370193 CCER1Q8TC90 406 aaPredicted RBP25.5■■□□□ 1.67
LBX1-201ENST00000370193 TTBK1Q5TCY1 1321 aaPredicted RBP25.46■■□□□ 1.67
LBX1-201ENST00000370193 BICRAQ9NZM4 1560 aa25.3■■□□□ 1.64
LBX1-201ENST00000370193 BAZ1AQ9NRL2 1556 aaPredicted RBP25.3■■□□□ 1.64
LBX1-201ENST00000370193 YTHDC1Q96MU7 727 aaKnown RBP25.24■■□□□ 1.63
LBX1-201ENST00000370193 SMARCA4P51532 1647 aa25.22■■□□□ 1.63
LBX1-201ENST00000370193 CCDC88BA6NC98 1476 aa25.07■■□□□ 1.6
LBX1-201ENST00000370193 ABCC8Q09428 1581 aa25.03■■□□□ 1.6
LBX1-201ENST00000370193 TOP2AP11388 1531 aaKnown RBP24.99■■□□□ 1.59
LBX1-201ENST00000370193 ZNF316A6NFI3 1004 aaPredicted RBP24.99■■□□□ 1.59
LBX1-201ENST00000370193 SMARCA2P51531 1590 aa24.94■■□□□ 1.58
LBX1-201ENST00000370193 MIER1Q8N108 512 aa24.91■■□□□ 1.58
LBX1-201ENST00000370193 BCL11AQ9H165 835 aa24.9■■□□□ 1.58
LBX1-201ENST00000370193 EIF4G1Q04637 1599 aaKnown RBP24.82■■□□□ 1.56
LBX1-201ENST00000370193 ATAD2BQ9ULI0 1458 aa24.76■■□□□ 1.55
LBX1-201ENST00000370193 BAZ1BQ9UIG0 1483 aaKnown RBP24.69■■□□□ 1.54
LBX1-201ENST00000370193 ANP32EQ9BTT0 268 aa24.68■■□□□ 1.54
LBX1-201ENST00000370193 SOGA1O94964 1423 aa24.68■■□□□ 1.54
LBX1-201ENST00000370193 RUSC2Q8N2Y8 1516 aa24.65■■□□□ 1.54
LBX1-201ENST00000370193 RANGAP1P46060 587 aaPredicted RBP24.57■■□□□ 1.52
LBX1-201ENST00000370193 PEG3Q9GZU2 1588 aa24.55■■□□□ 1.52
LBX1-201ENST00000370193 UBTFP17480 764 aaKnown RBP24.55■■□□□ 1.52
LBX1-201ENST00000370193 SUPT16HQ9Y5B9 1047 aaKnown RBP24.53■■□□□ 1.52
LBX1-201ENST00000370193 WRNQ14191 1432 aaPredicted RBP eCLIP24.52■■□□□ 1.52
LBX1-201ENST00000370193 TSHZ2Q9NRE2 1034 aa24.5■■□□□ 1.51
LBX1-201ENST00000370193 CSRNP3Q8WYN3 585 aa24.49■■□□□ 1.51
LBX1-201ENST00000370193 HNRNPUL2Q1KMD3 747 aaKnown RBP24.47■■□□□ 1.51
LBX1-201ENST00000370193 CEP162Q5TB80 1403 aa24.47■■□□□ 1.51
LBX1-201ENST00000370193 SYNJ1O43426 1573 aa24.4■■□□□ 1.5
LBX1-201ENST00000370193 CLSPNQ9HAW4 1339 aa24.28■■□□□ 1.48
LBX1-201ENST00000370193 TNIKQ9UKE5 1360 aa24.25■■□□□ 1.47
LBX1-201ENST00000370193 NCAPD3P42695 1498 aa24.23■■□□□ 1.47
LBX1-201ENST00000370193 DNAJC5BQ9UF47 199 aa24.19■■□□□ 1.46
LBX1-201ENST00000370193 BCANQ96GW7 911 aa24.12■■□□□ 1.45
LBX1-201ENST00000370193 HMGXB3Q12766 1538 aa24.09■■□□□ 1.45
LBX1-201ENST00000370193 CC2D2AQ9P2K1 1620 aa24.09■■□□□ 1.45
LBX1-201ENST00000370193 PRKCSHP14314 528 aaPredicted RBP24.08■■□□□ 1.45
LBX1-201ENST00000370193 RAPGEF2Q9Y4G8 1499 aa24.03■■□□□ 1.44
LBX1-201ENST00000370193 CUX1P39880 1505 aa24■■□□□ 1.43
LBX1-201ENST00000370193 GOLGA3Q08378 1498 aa24■■□□□ 1.43
LBX1-201ENST00000370193 KCNH8Q96L42 1107 aa23.99■■□□□ 1.43
LBX1-201ENST00000370193 EEA1Q15075 1411 aa23.97■■□□□ 1.43
LBX1-201ENST00000370193 CFTRP13569 1480 aa23.96■■□□□ 1.43
LBX1-201ENST00000370193 TOP2BQ02880 1626 aa23.95■■□□□ 1.42
LBX1-201ENST00000370193 NESP48681 1621 aa23.92■■□□□ 1.42
LBX1-201ENST00000370193 FKBP8Q14318 412 aa23.91■■□□□ 1.42
LBX1-201ENST00000370193 APLP2Q06481 763 aa23.89■■□□□ 1.41
LBX1-201ENST00000370193 RBM19Q9Y4C8 960 aaKnown RBP23.89■■□□□ 1.41
LBX1-201ENST00000370193 CEP164Q9UPV0 1460 aa23.88■■□□□ 1.41
LBX1-201ENST00000370193 CADPSQ9ULU8 1353 aa23.87■■□□□ 1.41
LBX1-201ENST00000370193 DHX57Q6P158 1386 aaKnown RBP23.85■■□□□ 1.41
LBX1-201ENST00000370193 CLIP1P30622 1438 aa23.84■■□□□ 1.41
LBX1-201ENST00000370193 ITGAEP38570 1179 aa23.83■■□□□ 1.4
LBX1-201ENST00000370193 BIVM-ERCC5R4GMW8 1640 aa23.8■■□□□ 1.4
LBX1-201ENST00000370193 VPS8Q8N3P4 1428 aa23.74■■□□□ 1.39
LBX1-201ENST00000370193 KIF21BO75037 1637 aa23.74■■□□□ 1.39
LBX1-201ENST00000370193 MSH5O43196 834 aa23.73■■□□□ 1.39
LBX1-201ENST00000370193 CUX2O14529 1486 aa23.72■■□□□ 1.39
LBX1-201ENST00000370193 KANK4Q5T7N3 995 aaPredicted RBP23.71■■□□□ 1.39
LBX1-201ENST00000370193 KIF27Q86VH2 1401 aa23.69■■□□□ 1.38
LBX1-201ENST00000370193 FANCD2Q9BXW9 1451 aa23.69■■□□□ 1.38
LBX1-201ENST00000370193 FGD5Q6ZNL6 1462 aa23.68■■□□□ 1.38
LBX1-201ENST00000370193 RAD54L2Q9Y4B4 1467 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 280 ms