RNA–Protein interactions for RNA: ENST00000335494.5

TYSND1-202, Transcript of trypsin domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene TYSND1, Length 3,397 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TYSND1-202ENST00000335494 NISCHQ9Y2I1 1504 aa32.74■■■□□ 2.83
TYSND1-202ENST00000335494 SHROOM4Q9ULL8 1493 aa28.54■■■□□ 2.16
TYSND1-202ENST00000335494 DCAF8L2P0C7V8 631 aa28.41■■■□□ 2.14
TYSND1-202ENST00000335494 SUPT5HO00267 1087 aaKnown RBP27.83■■■□□ 2.05
TYSND1-202ENST00000335494 CCDC180Q9P1Z9 1646 aa27.66■■■□□ 2.02
TYSND1-202ENST00000335494 ZCCHC6Q5VYS8 1495 aaKnown RBP27.53■■■□□ 2
TYSND1-202ENST00000335494 ABCC9O60706 1549 aa26.82■■□□□ 1.88
TYSND1-202ENST00000335494 SCRIBQ14160 1630 aa26.51■■□□□ 1.83
TYSND1-202ENST00000335494 DCAF1Q9Y4B6 1507 aa26.46■■□□□ 1.83
TYSND1-202ENST00000335494 CHIC1Q5VXU3 224 aa26.41■■□□□ 1.82
TYSND1-202ENST00000335494 MYO15BQ96JP2 1530 aa26.15■■□□□ 1.78
TYSND1-202ENST00000335494 EHMT2Q96KQ7 1210 aa26.03■■□□□ 1.76
TYSND1-202ENST00000335494 LOC105371045A0A1W2PR82 267 aa25.95■■□□□ 1.75
TYSND1-202ENST00000335494 RSF1Q96T23 1441 aaPredicted RBP25.91■■□□□ 1.74
TYSND1-202ENST00000335494 FAM9AQ8IZU1 332 aaPredicted RBP25.89■■□□□ 1.73
TYSND1-202ENST00000335494 CECR2Q9BXF3 1484 aa25.85■■□□□ 1.73
TYSND1-202ENST00000335494 NACADO15069 1562 aa25.84■■□□□ 1.73
TYSND1-202ENST00000335494 PABPN1Q86U42 306 aaKnown RBP eCLIP25.82■■□□□ 1.72
TYSND1-202ENST00000335494 TRIM41Q8WV44 630 aa25.7■■□□□ 1.71
TYSND1-202ENST00000335494 RB1CC1Q8TDY2 1594 aa25.64■■□□□ 1.7
TYSND1-202ENST00000335494 MROH2BQ7Z745 1585 aa25.6■■□□□ 1.69
TYSND1-202ENST00000335494 PCGF6Q9BYE7 350 aa25.57■■□□□ 1.68
TYSND1-202ENST00000335494 WIZO95785 1651 aa25.45■■□□□ 1.66
TYSND1-202ENST00000335494 BAZ1AQ9NRL2 1556 aaPredicted RBP25.16■■□□□ 1.62
TYSND1-202ENST00000335494 PPARGC1BQ86YN6 1023 aaKnown RBP25.16■■□□□ 1.62
TYSND1-202ENST00000335494 UNC13AQ9UPW8 1703 aa25.15■■□□□ 1.62
TYSND1-202ENST00000335494 HRCP23327 699 aa25.07■■□□□ 1.6
TYSND1-202ENST00000335494 TTBK1Q5TCY1 1321 aaPredicted RBP25.01■■□□□ 1.59
TYSND1-202ENST00000335494 SMARCA4P51532 1647 aa25■■□□□ 1.59
TYSND1-202ENST00000335494 CCDC88BA6NC98 1476 aa24.93■■□□□ 1.58
TYSND1-202ENST00000335494 ABCC8Q09428 1581 aa24.92■■□□□ 1.58
TYSND1-202ENST00000335494 BICRAQ9NZM4 1560 aa24.91■■□□□ 1.58
TYSND1-202ENST00000335494 TOP2AP11388 1531 aaKnown RBP24.83■■□□□ 1.57
TYSND1-202ENST00000335494 TRIM26Q12899 539 aaPredicted RBP24.79■■□□□ 1.56
TYSND1-202ENST00000335494 RANGAP1P46060 587 aaPredicted RBP24.76■■□□□ 1.55
TYSND1-202ENST00000335494 SMARCA2P51531 1590 aa24.74■■□□□ 1.55
TYSND1-202ENST00000335494 UBTFP17480 764 aaKnown RBP24.7■■□□□ 1.54
TYSND1-202ENST00000335494 SOGA1O94964 1423 aa24.63■■□□□ 1.53
TYSND1-202ENST00000335494 PELP1Q8IZL8 1130 aaKnown RBP24.63■■□□□ 1.53
TYSND1-202ENST00000335494 BAZ1BQ9UIG0 1483 aaKnown RBP24.59■■□□□ 1.53
TYSND1-202ENST00000335494 ATAD2BQ9ULI0 1458 aa24.56■■□□□ 1.52
TYSND1-202ENST00000335494 RUSC2Q8N2Y8 1516 aa24.54■■□□□ 1.52
TYSND1-202ENST00000335494 EIF4G1Q04637 1599 aaKnown RBP24.51■■□□□ 1.51
TYSND1-202ENST00000335494 CSRNP3Q8WYN3 585 aa24.47■■□□□ 1.51
TYSND1-202ENST00000335494 WRNQ14191 1432 aaPredicted RBP eCLIP24.44■■□□□ 1.5
TYSND1-202ENST00000335494 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.27■■□□□ 1.48
TYSND1-202ENST00000335494 CEP162Q5TB80 1403 aa24.26■■□□□ 1.47
TYSND1-202ENST00000335494 SYNJ1O43426 1573 aa24.23■■□□□ 1.47
TYSND1-202ENST00000335494 PEG3Q9GZU2 1588 aa24.23■■□□□ 1.47
TYSND1-202ENST00000335494 SCAF1Q9H7N4 1312 aaKnown RBP24.15■■□□□ 1.46
TYSND1-202ENST00000335494 CCER1Q8TC90 406 aaPredicted RBP24.12■■□□□ 1.45
TYSND1-202ENST00000335494 TNIKQ9UKE5 1360 aa24.07■■□□□ 1.44
TYSND1-202ENST00000335494 GOLGA3Q08378 1498 aa24.05■■□□□ 1.44
TYSND1-202ENST00000335494 EEA1Q15075 1411 aa24.01■■□□□ 1.43
TYSND1-202ENST00000335494 APLP2Q06481 763 aa24■■□□□ 1.43
TYSND1-202ENST00000335494 HNRNPUL2Q1KMD3 747 aaKnown RBP24■■□□□ 1.43
TYSND1-202ENST00000335494 NCAPD3P42695 1498 aa24■■□□□ 1.43
TYSND1-202ENST00000335494 RAPGEF2Q9Y4G8 1499 aa23.98■■□□□ 1.43
TYSND1-202ENST00000335494 ZEB1P37275 1124 aaPredicted RBP23.94■■□□□ 1.42
TYSND1-202ENST00000335494 CLIP1P30622 1438 aa23.93■■□□□ 1.42
TYSND1-202ENST00000335494 CEP164Q9UPV0 1460 aa23.92■■□□□ 1.42
TYSND1-202ENST00000335494 DNAJC5BQ9UF47 199 aa23.85■■□□□ 1.41
TYSND1-202ENST00000335494 HMGXB3Q12766 1538 aa23.85■■□□□ 1.41
TYSND1-202ENST00000335494 CUX1P39880 1505 aa23.81■■□□□ 1.4
TYSND1-202ENST00000335494 CC2D2AQ9P2K1 1620 aa23.8■■□□□ 1.4
TYSND1-202ENST00000335494 ATP1B4Q9UN42 357 aaPredicted RBP23.79■■□□□ 1.4
TYSND1-202ENST00000335494 TOP2BQ02880 1626 aa23.78■■□□□ 1.4
TYSND1-202ENST00000335494 CFTRP13569 1480 aa23.76■■□□□ 1.39
TYSND1-202ENST00000335494 P3H3Q8IVL6 736 aa23.75■■□□□ 1.39
TYSND1-202ENST00000335494 CADPSQ9ULU8 1353 aa23.73■■□□□ 1.39
TYSND1-202ENST00000335494 ITGAEP38570 1179 aa23.7■■□□□ 1.38
TYSND1-202ENST00000335494 KIF27Q86VH2 1401 aa23.7■■□□□ 1.38
TYSND1-202ENST00000335494 NESP48681 1621 aa23.69■■□□□ 1.38
TYSND1-202ENST00000335494 CUX2O14529 1486 aa23.69■■□□□ 1.38
TYSND1-202ENST00000335494 MYT1Q01538 1121 aa23.68■■□□□ 1.38
TYSND1-202ENST00000335494 KIF21BO75037 1637 aa23.66■■□□□ 1.38
TYSND1-202ENST00000335494 VPS8Q8N3P4 1428 aa23.61■■□□□ 1.37
TYSND1-202ENST00000335494 KANK4Q5T7N3 995 aaPredicted RBP23.59■■□□□ 1.37
TYSND1-202ENST00000335494 BIVM-ERCC5R4GMW8 1640 aa23.58■■□□□ 1.37
TYSND1-202ENST00000335494 FGD5Q6ZNL6 1462 aa23.55■■□□□ 1.36
TYSND1-202ENST00000335494 FANCD2Q9BXW9 1451 aa23.55■■□□□ 1.36
TYSND1-202ENST00000335494 RAD54L2Q9Y4B4 1467 aa23.52■■□□□ 1.36
TYSND1-202ENST00000335494 PRXQ9BXM0 1461 aa23.52■■□□□ 1.35
TYSND1-202ENST00000335494 IGF1RP08069 1367 aa23.47■■□□□ 1.35
TYSND1-202ENST00000335494 CARMIL1Q5VZK9 1371 aa23.47■■□□□ 1.35
TYSND1-202ENST00000335494 ARAP1Q96P48 1450 aa23.45■■□□□ 1.34
TYSND1-202ENST00000335494 GTF3C3Q9Y5Q9 886 aa23.41■■□□□ 1.34
TYSND1-202ENST00000335494 TDRD9Q8NDG6 1382 aaKnown RBP23.4■■□□□ 1.34
TYSND1-202ENST00000335494 NEUROD1Q13562 356 aa23.39■■□□□ 1.33
TYSND1-202ENST00000335494 ERICH3Q5RHP9 1530 aa23.34■■□□□ 1.33
TYSND1-202ENST00000335494 ARID3CA6NKF2 412 aa23.32■■□□□ 1.32
TYSND1-202ENST00000335494 DIEXFQ68CQ4 756 aaKnown RBP23.31■■□□□ 1.32
TYSND1-202ENST00000335494 ARHGAP35Q9NRY4 1499 aa23.31■■□□□ 1.32
TYSND1-202ENST00000335494 FAM50AQ14320 339 aaKnown RBP23.3■■□□□ 1.32
TYSND1-202ENST00000335494 YTHDC1Q96MU7 727 aaKnown RBP23.29■■□□□ 1.32
TYSND1-202ENST00000335494 POLA1P09884 1462 aaPredicted RBP23.28■■□□□ 1.32
TYSND1-202ENST00000335494 ACIN1Q9UKV3 1341 aaKnown RBP23.27■■□□□ 1.32
TYSND1-202ENST00000335494 TOPBP1Q92547 1522 aa23.27■■□□□ 1.32
TYSND1-202ENST00000335494 FHOD3Q2V2M9 1422 aa23.21■■□□□ 1.31
TYSND1-202ENST00000335494 PRDM2Q13029 1718 aa23.2■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms