RNA–Protein interactions for RNA: ENST00000625364.1

PPA1-206, Transcript of pyrophosphatase (inorganic) 1, human

TSL 5 BASIC

Gene PPA1, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPA1-206	ENST00000625364	NISCH	Q9Y2I1	1504 aa		36.9	■■■■□ 3.5
PPA1-206	ENST00000625364	ABCC9	O60706	1549 aa		33.86	■■■■□ 3.01
PPA1-206	ENST00000625364	CCDC180	Q9P1Z9	1646 aa		33.38	■■■□□ 2.93
PPA1-206	ENST00000625364	DNAJC5B	Q9UF47	199 aa		32.17	■■■□□ 2.74
PPA1-206	ENST00000625364	RB1CC1	Q8TDY2	1594 aa		32.02	■■■□□ 2.72
PPA1-206	ENST00000625364	NACAD	O15069	1562 aa		31.65	■■■□□ 2.66
PPA1-206	ENST00000625364	PABPN1	Q86U42	306 aa	Known RBP eCLIP	31.4	■■■□□ 2.62
PPA1-206	ENST00000625364	DCAF8L2	P0C7V8	631 aa		31.33	■■■□□ 2.61
PPA1-206	ENST00000625364	UNC13A	Q9UPW8	1703 aa		31.31	■■■□□ 2.6
PPA1-206	ENST00000625364	BICRA	Q9NZM4	1560 aa		31.08	■■■□□ 2.57
PPA1-206	ENST00000625364	MYO15B	Q96JP2	1530 aa		31.03	■■■□□ 2.56
PPA1-206	ENST00000625364	SHROOM4	Q9ULL8	1493 aa		30.63	■■■□□ 2.49
PPA1-206	ENST00000625364	CC2D2A	Q9P2K1	1620 aa		30.57	■■■□□ 2.48
PPA1-206	ENST00000625364	CECR2	Q9BXF3	1484 aa		30.56	■■■□□ 2.48
PPA1-206	ENST00000625364	ZCCHC6	Q5VYS8	1495 aa	Known RBP	30.49	■■■□□ 2.47
PPA1-206	ENST00000625364	DCAF1	Q9Y4B6	1507 aa		30.45	■■■□□ 2.47
PPA1-206	ENST00000625364	EIF4G1	Q04637	1599 aa	Known RBP	30.38	■■■□□ 2.45
PPA1-206	ENST00000625364	SCRIB	Q14160	1630 aa		30.38	■■■□□ 2.45
PPA1-206	ENST00000625364	DNAJC5	Q9H3Z4	198 aa		29.93	■■■□□ 2.38
PPA1-206	ENST00000625364	CUX2	O14529	1486 aa		29.42	■■■□□ 2.3
PPA1-206	ENST00000625364	ERCC6	Q03468	1493 aa		29.29	■■■□□ 2.28
PPA1-206	ENST00000625364	NCAPD3	P42695	1498 aa		29.2	■■■□□ 2.26
PPA1-206	ENST00000625364	ATAD2B	Q9ULI0	1458 aa		29.05	■■■□□ 2.24
PPA1-206	ENST00000625364	HMGXB3	Q12766	1538 aa		28.98	■■■□□ 2.23
PPA1-206	ENST00000625364	SMARCA2	P51531	1590 aa		28.96	■■■□□ 2.23
PPA1-206	ENST00000625364	NES	P48681	1621 aa		28.93	■■■□□ 2.22
PPA1-206	ENST00000625364	SMARCA4	P51532	1647 aa		28.92	■■■□□ 2.22
PPA1-206	ENST00000625364	THOC2	Q8NI27	1593 aa	Known RBP	28.78	■■■□□ 2.2
PPA1-206	ENST00000625364	BAZ1B	Q9UIG0	1483 aa	Known RBP	28.77	■■■□□ 2.2
PPA1-206	ENST00000625364	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	28.69	■■■□□ 2.18
PPA1-206	ENST00000625364	LAMC3	Q9Y6N6	1575 aa		28.67	■■■□□ 2.18
PPA1-206	ENST00000625364	PEG3	Q9GZU2	1588 aa		28.63	■■■□□ 2.17
PPA1-206	ENST00000625364	KIF21A	Q7Z4S6	1674 aa		28.58	■■■□□ 2.16
PPA1-206	ENST00000625364	PDS5B	Q9NTI5	1447 aa		28.5	■■■□□ 2.15
PPA1-206	ENST00000625364	TRIM41	Q8WV44	630 aa		28.43	■■■□□ 2.14
PPA1-206	ENST00000625364	MROH2B	Q7Z745	1585 aa		28.42	■■■□□ 2.14
PPA1-206	ENST00000625364	MRC2	Q9UBG0	1479 aa		28.3	■■■□□ 2.12
PPA1-206	ENST00000625364	CADPS	Q9ULU8	1353 aa		28.29	■■■□□ 2.12
PPA1-206	ENST00000625364	WDR62	O43379	1518 aa		28.26	■■■□□ 2.11
PPA1-206	ENST00000625364	CEP164	Q9UPV0	1460 aa		28.09	■■■□□ 2.09
PPA1-206	ENST00000625364	WIZ	O95785	1651 aa		28.07	■■■□□ 2.08
PPA1-206	ENST00000625364	FANCD2	Q9BXW9	1451 aa		28	■■■□□ 2.07
PPA1-206	ENST00000625364	OSCAR	Q8IYS5	282 aa		27.93	■■■□□ 2.06
PPA1-206	ENST00000625364	CFTR	P13569	1480 aa		27.87	■■■□□ 2.05
PPA1-206	ENST00000625364	URB2	Q14146	1524 aa	Known RBP	27.8	■■■□□ 2.04
PPA1-206	ENST00000625364	TOP2A	P11388	1531 aa	Known RBP	27.69	■■■□□ 2.02
PPA1-206	ENST00000625364	RIMBP3C	A6NJZ7	1639 aa		27.68	■■■□□ 2.02
PPA1-206	ENST00000625364	RIMBP3B	A6NNM3	1639 aa		27.68	■■■□□ 2.02
PPA1-206	ENST00000625364	RIMBP3	Q9UFD9	1639 aa		27.68	■■■□□ 2.02
PPA1-206	ENST00000625364	RSF1	Q96T23	1441 aa	Predicted RBP	27.62	■■■□□ 2.01
PPA1-206	ENST00000625364	PRDM2	Q13029	1718 aa		27.61	■■■□□ 2.01
PPA1-206	ENST00000625364	ARHGEF11	O15085	1522 aa		27.54	■■■□□ 2
PPA1-206	ENST00000625364	IFT140	Q96RY7	1462 aa		27.54	■■■□□ 2
PPA1-206	ENST00000625364	ZNF608	Q9ULD9	1512 aa	Predicted RBP	27.54	■■■□□ 2
PPA1-206	ENST00000625364	TOPBP1	Q92547	1522 aa		27.41	■■□□□ 1.98
PPA1-206	ENST00000625364	EIF4G3	O43432	1585 aa	Known RBP	27.39	■■□□□ 1.98
PPA1-206	ENST00000625364	CCDC88B	A6NC98	1476 aa		27.35	■■□□□ 1.97
PPA1-206	ENST00000625364	CYB5RL	Q6IPT4	315 aa		27.32	■■□□□ 1.96
PPA1-206	ENST00000625364	ABCC8	Q09428	1581 aa		27.31	■■□□□ 1.96
PPA1-206	ENST00000625364	CHD1	O14646	1710 aa		27.3	■■□□□ 1.96
PPA1-206	ENST00000625364	DNMBP	Q6XZF7	1577 aa		27.28	■■□□□ 1.96
PPA1-206	ENST00000625364	ARAP1	Q96P48	1450 aa		27.23	■■□□□ 1.95
PPA1-206	ENST00000625364	AQR	O60306	1485 aa	Known RBP eCLIP	27.21	■■□□□ 1.95
PPA1-206	ENST00000625364	TARBP1	Q13395	1621 aa	Known RBP	27.21	■■□□□ 1.95
PPA1-206	ENST00000625364	TRH	P20396	242 aa	Predicted RBP	27.19	■■□□□ 1.94
PPA1-206	ENST00000625364	FBLN2	P98095	1184 aa		27.13	■■□□□ 1.93
PPA1-206	ENST00000625364	POLA1	P09884	1462 aa	Predicted RBP	27.09	■■□□□ 1.93
PPA1-206	ENST00000625364	RAD54L2	Q9Y4B4	1467 aa		27	■■□□□ 1.91
PPA1-206	ENST00000625364	CLASP1	Q7Z460	1538 aa		26.95	■■□□□ 1.91
PPA1-206	ENST00000625364	SNAPC4	Q5SXM2	1469 aa		26.95	■■□□□ 1.91
PPA1-206	ENST00000625364	TDRD9	Q8NDG6	1382 aa	Known RBP	26.95	■■□□□ 1.9
PPA1-206	ENST00000625364	SOGA1	O94964	1423 aa		26.94	■■□□□ 1.9
PPA1-206	ENST00000625364	WDR97	A6NE52	1622 aa		26.92	■■□□□ 1.9
PPA1-206	ENST00000625364	SYNJ1	O43426	1573 aa		26.9	■■□□□ 1.9
PPA1-206	ENST00000625364	FGD5	Q6ZNL6	1462 aa		26.86	■■□□□ 1.89
PPA1-206	ENST00000625364	MAGI1	Q96QZ7	1491 aa	Predicted RBP	26.86	■■□□□ 1.89
PPA1-206	ENST00000625364	CHMP7	Q8WUX9	453 aa	Predicted RBP	26.84	■■□□□ 1.89
PPA1-206	ENST00000625364	AEBP2	Q6ZN18	517 aa	Predicted RBP	26.81	■■□□□ 1.88
PPA1-206	ENST00000625364	GRIN2B	Q13224	1484 aa		26.79	■■□□□ 1.88
PPA1-206	ENST00000625364	SYNJ2	O15056	1496 aa		26.76	■■□□□ 1.87
PPA1-206	ENST00000625364	CUX1	P39880	1505 aa		26.75	■■□□□ 1.87
PPA1-206	ENST00000625364	GAPVD1	Q14C86	1478 aa		26.69	■■□□□ 1.86
PPA1-206	ENST00000625364	PBRM1	Q86U86	1689 aa		26.69	■■□□□ 1.86
PPA1-206	ENST00000625364	ABCA5	Q8WWZ7	1642 aa		26.54	■■□□□ 1.84
PPA1-206	ENST00000625364	ABCA10	Q8WWZ4	1543 aa		26.52	■■□□□ 1.84
PPA1-206	ENST00000625364	ERCC6L2	Q5T890	1561 aa		26.48	■■□□□ 1.83
PPA1-206	ENST00000625364	GRIN2A	Q12879	1464 aa		26.45	■■□□□ 1.82
PPA1-206	ENST00000625364	CEP170	Q5SW79	1584 aa		26.41	■■□□□ 1.82
PPA1-206	ENST00000625364	ADAMTS12	P58397	1594 aa		26.4	■■□□□ 1.82
PPA1-206	ENST00000625364	NUP160	Q12769	1436 aa		26.38	■■□□□ 1.81
PPA1-206	ENST00000625364	SHROOM2	Q13796	1616 aa		26.33	■■□□□ 1.81
PPA1-206	ENST00000625364	WRN	Q14191	1432 aa	Predicted RBP eCLIP	26.3	■■□□□ 1.8
PPA1-206	ENST00000625364	KIF13A	Q9H1H9	1805 aa		26.29	■■□□□ 1.8
PPA1-206	ENST00000625364	FHAD1	B1AJZ9	1412 aa		26.26	■■□□□ 1.79
PPA1-206	ENST00000625364	BIVM-ERCC5	R4GMW8	1640 aa		26.2	■■□□□ 1.78
PPA1-206	ENST00000625364	TOP2B	Q02880	1626 aa		26.18	■■□□□ 1.78
PPA1-206	ENST00000625364	ERICH3	Q5RHP9	1530 aa		26.18	■■□□□ 1.78
PPA1-206	ENST00000625364	PRG4	Q92954	1404 aa	Predicted RBP	26.15	■■□□□ 1.78
PPA1-206	ENST00000625364	ABCC10	Q5T3U5	1492 aa		26.06	■■□□□ 1.76
PPA1-206	ENST00000625364	JPH4	Q96JJ6	628 aa		26.06	■■□□□ 1.76

Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms