Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.82□□□□□ -0.04
EPHA3P29320 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC14.82□□□□□ -0.04
EPHA3P29320 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
EPHA3P29320 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
EPHA3P29320 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
EPHA3P29320 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
EPHA3P29320 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
EPHA3P29320 PES1-204ENST00000402284 2144 ntTSL 5 BASIC14.81□□□□□ -0.04
EPHA3P29320 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
EPHA3P29320 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
EPHA3P29320 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC14.81□□□□□ -0.04
EPHA3P29320 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
EPHA3P29320 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
EPHA3P29320 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
EPHA3P29320 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
EPHA3P29320 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
EPHA3P29320 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
EPHA3P29320 AC055811.4-201ENST00000624039 1754 ntBASIC14.81□□□□□ -0.04
EPHA3P29320 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
EPHA3P29320 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC14.81□□□□□ -0.04
EPHA3P29320 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC14.81□□□□□ -0.04
EPHA3P29320 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
EPHA3P29320 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC14.81□□□□□ -0.04
EPHA3P29320 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
EPHA3P29320 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
EPHA3P29320 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
EPHA3P29320 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
EPHA3P29320 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
EPHA3P29320 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
EPHA3P29320 AC004461.1-201ENST00000412461 403 ntBASIC14.81□□□□□ -0.04
EPHA3P29320 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC14.81□□□□□ -0.04
EPHA3P29320 AL080243.2-201ENST00000418783 582 ntBASIC14.81□□□□□ -0.04
EPHA3P29320 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC14.81□□□□□ -0.04
EPHA3P29320 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
EPHA3P29320 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC14.81□□□□□ -0.04
EPHA3P29320 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
EPHA3P29320 AL589739.1-201ENST00000607720 493 ntBASIC14.81□□□□□ -0.04
EPHA3P29320 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14.81□□□□□ -0.04
EPHA3P29320 AL033527.5-202ENST00000641632 1098 ntBASIC14.81□□□□□ -0.04
EPHA3P29320 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
EPHA3P29320 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
EPHA3P29320 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
EPHA3P29320 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
EPHA3P29320 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC14.81□□□□□ -0.04
EPHA3P29320 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
EPHA3P29320 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
EPHA3P29320 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
EPHA3P29320 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
EPHA3P29320 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
EPHA3P29320 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
EPHA3P29320 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC14.81□□□□□ -0.04
EPHA3P29320 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
EPHA3P29320 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
EPHA3P29320 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
EPHA3P29320 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC14.81□□□□□ -0.04
EPHA3P29320 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
EPHA3P29320 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
EPHA3P29320 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC14.8□□□□□ -0.04
EPHA3P29320 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
EPHA3P29320 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
EPHA3P29320 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC14.8□□□□□ -0.04
EPHA3P29320 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
EPHA3P29320 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC14.8□□□□□ -0.04
EPHA3P29320 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC14.8□□□□□ -0.04
EPHA3P29320 AL157414.3-201ENST00000624276 1954 ntBASIC14.8□□□□□ -0.04
EPHA3P29320 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
EPHA3P29320 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC14.8□□□□□ -0.04
EPHA3P29320 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
EPHA3P29320 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
EPHA3P29320 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
EPHA3P29320 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
EPHA3P29320 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
EPHA3P29320 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
EPHA3P29320 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC14.8□□□□□ -0.04
EPHA3P29320 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
EPHA3P29320 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
EPHA3P29320 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
EPHA3P29320 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC14.8□□□□□ -0.04
EPHA3P29320 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC14.8□□□□□ -0.04
EPHA3P29320 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC14.8□□□□□ -0.04
EPHA3P29320 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC14.8□□□□□ -0.04
EPHA3P29320 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC14.8□□□□□ -0.04
EPHA3P29320 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC14.8□□□□□ -0.04
EPHA3P29320 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC14.8□□□□□ -0.04
EPHA3P29320 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
EPHA3P29320 CICP20-201ENST00000443330 2801 ntBASIC14.8□□□□□ -0.04
EPHA3P29320 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
EPHA3P29320 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
EPHA3P29320 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
EPHA3P29320 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
EPHA3P29320 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
EPHA3P29320 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
EPHA3P29320 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
EPHA3P29320 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
EPHA3P29320 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC14.8□□□□□ -0.04
EPHA3P29320 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
EPHA3P29320 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
EPHA3P29320 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC14.8□□□□□ -0.04
EPHA3P29320 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
EPHA3P29320 MX1-218ENST00000619682 1980 ntTSL 5 BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms