RNA–Protein interactions for RNA: ENST00000221847.5

EBI3-201, Transcript of Epstein-Barr virus induced 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EBI3, Length 1,186 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBI3-201ENST00000221847 NISCHQ9Y2I1 1504 aa38.71■■■■□ 3.79
EBI3-201ENST00000221847 CCDC180Q9P1Z9 1646 aa34.31■■■■□ 3.08
EBI3-201ENST00000221847 ABCC9O60706 1549 aa33.58■■■□□ 2.97
EBI3-201ENST00000221847 DCAF8L2P0C7V8 631 aa32.4■■■□□ 2.78
EBI3-201ENST00000221847 RB1CC1Q8TDY2 1594 aa32.28■■■□□ 2.76
EBI3-201ENST00000221847 NACADO15069 1562 aa32.26■■■□□ 2.75
EBI3-201ENST00000221847 ZCCHC6Q5VYS8 1495 aaKnown RBP32.24■■■□□ 2.75
EBI3-201ENST00000221847 MYO15BQ96JP2 1530 aa32.07■■■□□ 2.72
EBI3-201ENST00000221847 DCAF1Q9Y4B6 1507 aa31.99■■■□□ 2.71
EBI3-201ENST00000221847 UNC13AQ9UPW8 1703 aa31.55■■■□□ 2.64
EBI3-201ENST00000221847 PABPN1Q86U42 306 aaKnown RBP eCLIP31.44■■■□□ 2.62
EBI3-201ENST00000221847 SCRIBQ14160 1630 aa31.38■■■□□ 2.61
EBI3-201ENST00000221847 BICRAQ9NZM4 1560 aa31.33■■■□□ 2.61
EBI3-201ENST00000221847 SHROOM4Q9ULL8 1493 aa30.92■■■□□ 2.54
EBI3-201ENST00000221847 DNAJC5BQ9UF47 199 aa30.78■■■□□ 2.52
EBI3-201ENST00000221847 EIF4G1Q04637 1599 aaKnown RBP30.48■■■□□ 2.47
EBI3-201ENST00000221847 CC2D2AQ9P2K1 1620 aa30.34■■■□□ 2.45
EBI3-201ENST00000221847 CECR2Q9BXF3 1484 aa30.19■■■□□ 2.42
EBI3-201ENST00000221847 SMARCA4P51532 1647 aa30■■■□□ 2.39
EBI3-201ENST00000221847 BAZ1AQ9NRL2 1556 aaPredicted RBP29.97■■■□□ 2.39
EBI3-201ENST00000221847 MROH2BQ7Z745 1585 aa29.86■■■□□ 2.37
EBI3-201ENST00000221847 ATAD2BQ9ULI0 1458 aa29.84■■■□□ 2.37
EBI3-201ENST00000221847 NCAPD3P42695 1498 aa29.79■■■□□ 2.36
EBI3-201ENST00000221847 SMARCA2P51531 1590 aa29.77■■■□□ 2.36
EBI3-201ENST00000221847 PEG3Q9GZU2 1588 aa29.68■■■□□ 2.34
EBI3-201ENST00000221847 HMGXB3Q12766 1538 aa29.62■■■□□ 2.33
EBI3-201ENST00000221847 BAZ1BQ9UIG0 1483 aaKnown RBP29.58■■■□□ 2.33
EBI3-201ENST00000221847 RSF1Q96T23 1441 aaPredicted RBP29.55■■■□□ 2.32
EBI3-201ENST00000221847 WIZO95785 1651 aa29.53■■■□□ 2.32
EBI3-201ENST00000221847 TOP2AP11388 1531 aaKnown RBP29.2■■■□□ 2.26
EBI3-201ENST00000221847 NESP48681 1621 aa29.09■■■□□ 2.25
EBI3-201ENST00000221847 LAMC3Q9Y6N6 1575 aa28.96■■■□□ 2.23
EBI3-201ENST00000221847 CADPSQ9ULU8 1353 aa28.95■■■□□ 2.22
EBI3-201ENST00000221847 SUPT5HO00267 1087 aaKnown RBP28.94■■■□□ 2.22
EBI3-201ENST00000221847 ERCC6Q03468 1493 aa28.91■■■□□ 2.22
EBI3-201ENST00000221847 CCDC88BA6NC98 1476 aa28.9■■■□□ 2.22
EBI3-201ENST00000221847 PDS5BQ9NTI5 1447 aa28.79■■■□□ 2.2
EBI3-201ENST00000221847 CFTRP13569 1480 aa28.78■■■□□ 2.2
EBI3-201ENST00000221847 KIF21AQ7Z4S6 1674 aa28.7■■■□□ 2.18
EBI3-201ENST00000221847 FANCD2Q9BXW9 1451 aa28.61■■■□□ 2.17
EBI3-201ENST00000221847 THOC2Q8NI27 1593 aaKnown RBP28.57■■■□□ 2.16
EBI3-201ENST00000221847 CEP164Q9UPV0 1460 aa28.55■■■□□ 2.16
EBI3-201ENST00000221847 CUX2O14529 1486 aa28.53■■■□□ 2.16
EBI3-201ENST00000221847 PRDM2Q13029 1718 aa28.51■■■□□ 2.15
EBI3-201ENST00000221847 MRC2Q9UBG0 1479 aa28.49■■■□□ 2.15
EBI3-201ENST00000221847 WDR62O43379 1518 aa28.38■■■□□ 2.13
EBI3-201ENST00000221847 URB2Q14146 1524 aaKnown RBP28.33■■■□□ 2.13
EBI3-201ENST00000221847 TOPBP1Q92547 1522 aa28.16■■■□□ 2.1
EBI3-201ENST00000221847 ABCC8Q09428 1581 aa28.13■■■□□ 2.09
EBI3-201ENST00000221847 DNMBPQ6XZF7 1577 aa28.11■■■□□ 2.09
EBI3-201ENST00000221847 CUX1P39880 1505 aa28■■■□□ 2.07
EBI3-201ENST00000221847 IFT140Q96RY7 1462 aa27.95■■■□□ 2.06
EBI3-201ENST00000221847 POLA1P09884 1462 aaPredicted RBP27.93■■■□□ 2.06
EBI3-201ENST00000221847 FGD5Q6ZNL6 1462 aa27.88■■■□□ 2.05
EBI3-201ENST00000221847 ZNF608Q9ULD9 1512 aaPredicted RBP27.85■■■□□ 2.05
EBI3-201ENST00000221847 WRNQ14191 1432 aaPredicted RBP eCLIP27.84■■■□□ 2.05
EBI3-201ENST00000221847 RAD54L2Q9Y4B4 1467 aa27.84■■■□□ 2.05
EBI3-201ENST00000221847 TARBP1Q13395 1621 aaKnown RBP27.84■■■□□ 2.05
EBI3-201ENST00000221847 SOGA1O94964 1423 aa27.84■■■□□ 2.05
EBI3-201ENST00000221847 SYNJ1O43426 1573 aa27.77■■■□□ 2.04
EBI3-201ENST00000221847 TOP2BQ02880 1626 aa27.75■■■□□ 2.03
EBI3-201ENST00000221847 BIVM-ERCC5R4GMW8 1640 aa27.74■■■□□ 2.03
EBI3-201ENST00000221847 AQRO60306 1485 aaKnown RBP eCLIP27.72■■■□□ 2.03
EBI3-201ENST00000221847 EIF4G3O43432 1585 aaKnown RBP27.69■■■□□ 2.02
EBI3-201ENST00000221847 TDRD9Q8NDG6 1382 aaKnown RBP27.69■■■□□ 2.02
EBI3-201ENST00000221847 WDR97A6NE52 1622 aa27.6■■■□□ 2.01
EBI3-201ENST00000221847 DNAJC5Q9H3Z4 198 aa27.6■■■□□ 2.01
EBI3-201ENST00000221847 ABCA10Q8WWZ4 1543 aa27.6■■■□□ 2.01
EBI3-201ENST00000221847 GAPVD1Q14C86 1478 aa27.51■■□□□ 1.99
EBI3-201ENST00000221847 GRIN2BQ13224 1484 aa27.48■■□□□ 1.99
EBI3-201ENST00000221847 ABCA5Q8WWZ7 1642 aa27.47■■□□□ 1.99
EBI3-201ENST00000221847 SNAPC4Q5SXM2 1469 aa27.44■■□□□ 1.98
EBI3-201ENST00000221847 OSCARQ8IYS5 282 aa27.42■■□□□ 1.98
EBI3-201ENST00000221847 PBRM1Q86U86 1689 aa27.4■■□□□ 1.98
EBI3-201ENST00000221847 FBLN2P98095 1184 aa27.39■■□□□ 1.98
EBI3-201ENST00000221847 MAGI1Q96QZ7 1491 aaPredicted RBP27.38■■□□□ 1.97
EBI3-201ENST00000221847 CHD1O14646 1710 aa27.33■■□□□ 1.97
EBI3-201ENST00000221847 CHMP7Q8WUX9 453 aaPredicted RBP27.31■■□□□ 1.96
EBI3-201ENST00000221847 TRIM41Q8WV44 630 aa27.3■■□□□ 1.96
EBI3-201ENST00000221847 SYNJ2O15056 1496 aa27.27■■□□□ 1.96
EBI3-201ENST00000221847 ERICH3Q5RHP9 1530 aa27.26■■□□□ 1.95
EBI3-201ENST00000221847 KIF27Q86VH2 1401 aa27.25■■□□□ 1.95
EBI3-201ENST00000221847 ADAMTS12P58397 1594 aa27.2■■□□□ 1.94
EBI3-201ENST00000221847 FHAD1B1AJZ9 1412 aa27.18■■□□□ 1.94
EBI3-201ENST00000221847 IGF1RP08069 1367 aa27.17■■□□□ 1.94
EBI3-201ENST00000221847 GRIN2AQ12879 1464 aa27.13■■□□□ 1.93
EBI3-201ENST00000221847 RUSC2Q8N2Y8 1516 aa27.1■■□□□ 1.93
EBI3-201ENST00000221847 CHIC1Q5VXU3 224 aa27.06■■□□□ 1.92
EBI3-201ENST00000221847 CLASP1Q7Z460 1538 aa27.04■■□□□ 1.92
EBI3-201ENST00000221847 CUL7Q14999 1698 aa27.01■■□□□ 1.92
EBI3-201ENST00000221847 CARMIL1Q5VZK9 1371 aa27■■□□□ 1.91
EBI3-201ENST00000221847 NUP160Q12769 1436 aa26.99■■□□□ 1.91
EBI3-201ENST00000221847 CEP170Q5SW79 1584 aa26.98■■□□□ 1.91
EBI3-201ENST00000221847 ARHGEF11O15085 1522 aa26.95■■□□□ 1.9
EBI3-201ENST00000221847 RIMBP3CA6NJZ7 1639 aa26.94■■□□□ 1.9
EBI3-201ENST00000221847 RIMBP3BA6NNM3 1639 aa26.94■■□□□ 1.9
EBI3-201ENST00000221847 RIMBP3Q9UFD9 1639 aa26.94■■□□□ 1.9
EBI3-201ENST00000221847 RAPGEF2Q9Y4G8 1499 aa26.83■■□□□ 1.89
EBI3-201ENST00000221847 CSRNP3Q8WYN3 585 aa26.79■■□□□ 1.88
EBI3-201ENST00000221847 FAM9AQ8IZU1 332 aaPredicted RBP26.78■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms