RNA–Protein interactions for RNA: ENST00000533938.1

AP006621.2-201, humanhuman

TSL 3 BASIC

Gene AP006621.2, Length 284 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP006621.2-201ENST00000533938 NISCHQ9Y2I1 1504 aa36.44■■■■□ 3.42
AP006621.2-201ENST00000533938 ABCC9O60706 1549 aa32.97■■■□□ 2.87
AP006621.2-201ENST00000533938 CCDC180Q9P1Z9 1646 aa32.36■■■□□ 2.77
AP006621.2-201ENST00000533938 DNAJC5BQ9UF47 199 aa31.48■■■□□ 2.63
AP006621.2-201ENST00000533938 RB1CC1Q8TDY2 1594 aa31.11■■■□□ 2.57
AP006621.2-201ENST00000533938 NACADO15069 1562 aa30.71■■■□□ 2.51
AP006621.2-201ENST00000533938 PABPN1Q86U42 306 aaKnown RBP eCLIP30.53■■■□□ 2.48
AP006621.2-201ENST00000533938 ZCCHC6Q5VYS8 1495 aaKnown RBP30.47■■■□□ 2.47
AP006621.2-201ENST00000533938 UNC13AQ9UPW8 1703 aa30.47■■■□□ 2.47
AP006621.2-201ENST00000533938 DCAF8L2P0C7V8 631 aa30.31■■■□□ 2.44
AP006621.2-201ENST00000533938 BICRAQ9NZM4 1560 aa30.21■■■□□ 2.43
AP006621.2-201ENST00000533938 DCAF1Q9Y4B6 1507 aa30.16■■■□□ 2.42
AP006621.2-201ENST00000533938 MYO15BQ96JP2 1530 aa30.04■■■□□ 2.4
AP006621.2-201ENST00000533938 CECR2Q9BXF3 1484 aa29.78■■■□□ 2.36
AP006621.2-201ENST00000533938 CC2D2AQ9P2K1 1620 aa29.78■■■□□ 2.36
AP006621.2-201ENST00000533938 SHROOM4Q9ULL8 1493 aa29.75■■■□□ 2.35
AP006621.2-201ENST00000533938 EIF4G1Q04637 1599 aaKnown RBP29.54■■■□□ 2.32
AP006621.2-201ENST00000533938 DNAJC5Q9H3Z4 198 aa29.44■■■□□ 2.3
AP006621.2-201ENST00000533938 SCRIBQ14160 1630 aa29.42■■■□□ 2.3
AP006621.2-201ENST00000533938 CUX2O14529 1486 aa28.72■■■□□ 2.19
AP006621.2-201ENST00000533938 ERCC6Q03468 1493 aa28.53■■■□□ 2.16
AP006621.2-201ENST00000533938 NCAPD3P42695 1498 aa28.32■■■□□ 2.12
AP006621.2-201ENST00000533938 BAZ1AQ9NRL2 1556 aaPredicted RBP28.22■■■□□ 2.11
AP006621.2-201ENST00000533938 SMARCA4P51532 1647 aa28.16■■■□□ 2.1
AP006621.2-201ENST00000533938 ATAD2BQ9ULI0 1458 aa28.15■■■□□ 2.1
AP006621.2-201ENST00000533938 NESP48681 1621 aa28.12■■■□□ 2.09
AP006621.2-201ENST00000533938 HMGXB3Q12766 1538 aa28.1■■■□□ 2.09
AP006621.2-201ENST00000533938 MROH2BQ7Z745 1585 aa28.1■■■□□ 2.09
AP006621.2-201ENST00000533938 SMARCA2P51531 1590 aa28.07■■■□□ 2.08
AP006621.2-201ENST00000533938 THOC2Q8NI27 1593 aaKnown RBP28.03■■■□□ 2.08
AP006621.2-201ENST00000533938 RSF1Q96T23 1441 aaPredicted RBP28■■■□□ 2.07
AP006621.2-201ENST00000533938 TRIM41Q8WV44 630 aa27.87■■■□□ 2.05
AP006621.2-201ENST00000533938 BAZ1BQ9UIG0 1483 aaKnown RBP27.86■■■□□ 2.05
AP006621.2-201ENST00000533938 WIZO95785 1651 aa27.85■■■□□ 2.05
AP006621.2-201ENST00000533938 LAMC3Q9Y6N6 1575 aa27.85■■■□□ 2.05
AP006621.2-201ENST00000533938 PEG3Q9GZU2 1588 aa27.83■■■□□ 2.05
AP006621.2-201ENST00000533938 SUPT5HO00267 1087 aaKnown RBP27.83■■■□□ 2.05
AP006621.2-201ENST00000533938 KIF21AQ7Z4S6 1674 aa27.81■■■□□ 2.04
AP006621.2-201ENST00000533938 PDS5BQ9NTI5 1447 aa27.67■■■□□ 2.02
AP006621.2-201ENST00000533938 TOP2AP11388 1531 aaKnown RBP27.58■■■□□ 2.01
AP006621.2-201ENST00000533938 MRC2Q9UBG0 1479 aa27.5■■□□□ 1.99
AP006621.2-201ENST00000533938 WDR62O43379 1518 aa27.46■■□□□ 1.99
AP006621.2-201ENST00000533938 CADPSQ9ULU8 1353 aa27.42■■□□□ 1.98
AP006621.2-201ENST00000533938 CCDC88BA6NC98 1476 aa27.25■■□□□ 1.95
AP006621.2-201ENST00000533938 CEP164Q9UPV0 1460 aa27.25■■□□□ 1.95
AP006621.2-201ENST00000533938 OSCARQ8IYS5 282 aa27.23■■□□□ 1.95
AP006621.2-201ENST00000533938 FANCD2Q9BXW9 1451 aa27.14■■□□□ 1.94
AP006621.2-201ENST00000533938 RIMBP3CA6NJZ7 1639 aa27.05■■□□□ 1.92
AP006621.2-201ENST00000533938 RIMBP3BA6NNM3 1639 aa27.05■■□□□ 1.92
AP006621.2-201ENST00000533938 RIMBP3Q9UFD9 1639 aa27.05■■□□□ 1.92
AP006621.2-201ENST00000533938 CFTRP13569 1480 aa26.98■■□□□ 1.91
AP006621.2-201ENST00000533938 URB2Q14146 1524 aaKnown RBP26.96■■□□□ 1.91
AP006621.2-201ENST00000533938 ARHGEF11O15085 1522 aa26.87■■□□□ 1.89
AP006621.2-201ENST00000533938 PRDM2Q13029 1718 aa26.81■■□□□ 1.88
AP006621.2-201ENST00000533938 ZNF608Q9ULD9 1512 aaPredicted RBP26.74■■□□□ 1.87
AP006621.2-201ENST00000533938 IFT140Q96RY7 1462 aa26.72■■□□□ 1.87
AP006621.2-201ENST00000533938 CYB5RLQ6IPT4 315 aa26.64■■□□□ 1.86
AP006621.2-201ENST00000533938 EIF4G3O43432 1585 aaKnown RBP26.61■■□□□ 1.85
AP006621.2-201ENST00000533938 TRHP20396 242 aaPredicted RBP26.59■■□□□ 1.85
AP006621.2-201ENST00000533938 CHD1O14646 1710 aa26.57■■□□□ 1.84
AP006621.2-201ENST00000533938 TOPBP1Q92547 1522 aa26.55■■□□□ 1.84
AP006621.2-201ENST00000533938 ARAP1Q96P48 1450 aa26.55■■□□□ 1.84
AP006621.2-201ENST00000533938 ABCC8Q09428 1581 aa26.46■■□□□ 1.83
AP006621.2-201ENST00000533938 DNMBPQ6XZF7 1577 aa26.41■■□□□ 1.82
AP006621.2-201ENST00000533938 WRNQ14191 1432 aaPredicted RBP eCLIP26.4■■□□□ 1.82
AP006621.2-201ENST00000533938 TARBP1Q13395 1621 aaKnown RBP26.39■■□□□ 1.82
AP006621.2-201ENST00000533938 AQRO60306 1485 aaKnown RBP eCLIP26.38■■□□□ 1.81
AP006621.2-201ENST00000533938 AEBP2Q6ZN18 517 aaPredicted RBP26.35■■□□□ 1.81
AP006621.2-201ENST00000533938 FBLN2P98095 1184 aa26.34■■□□□ 1.81
AP006621.2-201ENST00000533938 CUX1P39880 1505 aa26.34■■□□□ 1.81
AP006621.2-201ENST00000533938 SYNJ1O43426 1573 aa26.3■■□□□ 1.8
AP006621.2-201ENST00000533938 CHIC1Q5VXU3 224 aa26.3■■□□□ 1.8
AP006621.2-201ENST00000533938 TOP2BQ02880 1626 aa26.28■■□□□ 1.8
AP006621.2-201ENST00000533938 BIVM-ERCC5R4GMW8 1640 aa26.27■■□□□ 1.8
AP006621.2-201ENST00000533938 POLA1P09884 1462 aaPredicted RBP26.23■■□□□ 1.79
AP006621.2-201ENST00000533938 CLASP1Q7Z460 1538 aa26.2■■□□□ 1.79
AP006621.2-201ENST00000533938 FGD5Q6ZNL6 1462 aa26.16■■□□□ 1.78
AP006621.2-201ENST00000533938 SNAPC4Q5SXM2 1469 aa26.13■■□□□ 1.77
AP006621.2-201ENST00000533938 RAD54L2Q9Y4B4 1467 aa26.13■■□□□ 1.77
AP006621.2-201ENST00000533938 TDRD9Q8NDG6 1382 aaKnown RBP26.1■■□□□ 1.77
AP006621.2-201ENST00000533938 WDR97A6NE52 1622 aa26.1■■□□□ 1.77
AP006621.2-201ENST00000533938 SOGA1O94964 1423 aa26.06■■□□□ 1.76
AP006621.2-201ENST00000533938 MAGI1Q96QZ7 1491 aaPredicted RBP26.04■■□□□ 1.76
AP006621.2-201ENST00000533938 CHMP7Q8WUX9 453 aaPredicted RBP26.03■■□□□ 1.76
AP006621.2-201ENST00000533938 SYNJ2O15056 1496 aa25.96■■□□□ 1.75
AP006621.2-201ENST00000533938 GRIN2BQ13224 1484 aa25.96■■□□□ 1.75
AP006621.2-201ENST00000533938 GAPVD1Q14C86 1478 aa25.95■■□□□ 1.74
AP006621.2-201ENST00000533938 ABCA10Q8WWZ4 1543 aa25.92■■□□□ 1.74
AP006621.2-201ENST00000533938 PBRM1Q86U86 1689 aa25.88■■□□□ 1.73
AP006621.2-201ENST00000533938 KIF27Q86VH2 1401 aa25.81■■□□□ 1.72
AP006621.2-201ENST00000533938 ABCA5Q8WWZ7 1642 aa25.76■■□□□ 1.71
AP006621.2-201ENST00000533938 RUSC2Q8N2Y8 1516 aa25.74■■□□□ 1.71
AP006621.2-201ENST00000533938 EEA1Q15075 1411 aa25.73■■□□□ 1.71
AP006621.2-201ENST00000533938 ERCC6L2Q5T890 1561 aa25.73■■□□□ 1.71
AP006621.2-201ENST00000533938 FAM9AQ8IZU1 332 aaPredicted RBP25.72■■□□□ 1.71
AP006621.2-201ENST00000533938 KIF13AQ9H1H9 1805 aa25.66■■□□□ 1.7
AP006621.2-201ENST00000533938 CEP170Q5SW79 1584 aa25.64■■□□□ 1.69
AP006621.2-201ENST00000533938 GRIN2AQ12879 1464 aa25.63■■□□□ 1.69
AP006621.2-201ENST00000533938 ERICH3Q5RHP9 1530 aa25.63■■□□□ 1.69
AP006621.2-201ENST00000533938 CSRNP3Q8WYN3 585 aa25.61■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms