Protein–RNA interactions for Protein: A6NDR6

MEIS3P1, Putative homeobox protein Meis3-like 1, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1A6NDR6 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
MEIS3P1A6NDR6 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC13.09□□□□□ -0.31
MEIS3P1A6NDR6 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
MEIS3P1A6NDR6 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
MEIS3P1A6NDR6 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
MEIS3P1A6NDR6 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
MEIS3P1A6NDR6 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.09□□□□□ -0.31
MEIS3P1A6NDR6 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
MEIS3P1A6NDR6 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
MEIS3P1A6NDR6 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
MEIS3P1A6NDR6 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
MEIS3P1A6NDR6 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
MEIS3P1A6NDR6 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
MEIS3P1A6NDR6 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
MEIS3P1A6NDR6 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.31
MEIS3P1A6NDR6 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
MEIS3P1A6NDR6 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
MEIS3P1A6NDR6 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC13.08□□□□□ -0.31
MEIS3P1A6NDR6 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.31
MEIS3P1A6NDR6 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.31
MEIS3P1A6NDR6 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC13.08□□□□□ -0.31
MEIS3P1A6NDR6 DMBT1P1-203ENST00000636837 4628 ntBASIC13.08□□□□□ -0.31
MEIS3P1A6NDR6 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
MEIS3P1A6NDR6 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
MEIS3P1A6NDR6 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
MEIS3P1A6NDR6 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
MEIS3P1A6NDR6 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
MEIS3P1A6NDR6 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
MEIS3P1A6NDR6 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
MEIS3P1A6NDR6 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC13.08□□□□□ -0.32
MEIS3P1A6NDR6 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC13.08□□□□□ -0.32
MEIS3P1A6NDR6 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
MEIS3P1A6NDR6 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
MEIS3P1A6NDR6 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC13.08□□□□□ -0.32
MEIS3P1A6NDR6 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
MEIS3P1A6NDR6 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC13.08□□□□□ -0.32
MEIS3P1A6NDR6 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
MEIS3P1A6NDR6 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
MEIS3P1A6NDR6 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
MEIS3P1A6NDR6 KLK8-202ENST00000320838 456 ntTSL 5 BASIC13.08□□□□□ -0.32
MEIS3P1A6NDR6 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
MEIS3P1A6NDR6 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
MEIS3P1A6NDR6 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC13.08□□□□□ -0.32
MEIS3P1A6NDR6 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC13.08□□□□□ -0.32
MEIS3P1A6NDR6 AC093909.1-201ENST00000504731 1122 ntBASIC13.08□□□□□ -0.32
MEIS3P1A6NDR6 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
MEIS3P1A6NDR6 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC13.08□□□□□ -0.32
MEIS3P1A6NDR6 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
MEIS3P1A6NDR6 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
MEIS3P1A6NDR6 MAX-210ENST00000555419 765 ntTSL 5 BASIC13.08□□□□□ -0.32
MEIS3P1A6NDR6 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
MEIS3P1A6NDR6 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
MEIS3P1A6NDR6 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC13.08□□□□□ -0.32
MEIS3P1A6NDR6 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC13.08□□□□□ -0.32
MEIS3P1A6NDR6 SERF2-217ENST00000630046 862 ntTSL 5 BASIC13.08□□□□□ -0.32
MEIS3P1A6NDR6 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC13.08□□□□□ -0.32
MEIS3P1A6NDR6 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
MEIS3P1A6NDR6 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
MEIS3P1A6NDR6 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
MEIS3P1A6NDR6 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
MEIS3P1A6NDR6 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
MEIS3P1A6NDR6 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
MEIS3P1A6NDR6 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
MEIS3P1A6NDR6 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
MEIS3P1A6NDR6 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.08□□□□□ -0.32
MEIS3P1A6NDR6 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
MEIS3P1A6NDR6 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
MEIS3P1A6NDR6 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
MEIS3P1A6NDR6 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
MEIS3P1A6NDR6 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
MEIS3P1A6NDR6 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
MEIS3P1A6NDR6 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
MEIS3P1A6NDR6 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
MEIS3P1A6NDR6 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
MEIS3P1A6NDR6 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
MEIS3P1A6NDR6 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
MEIS3P1A6NDR6 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
MEIS3P1A6NDR6 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
MEIS3P1A6NDR6 TP73-211ENST00000604074 4806 ntTSL 5 BASIC13.08□□□□□ -0.32
MEIS3P1A6NDR6 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
MEIS3P1A6NDR6 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
MEIS3P1A6NDR6 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
MEIS3P1A6NDR6 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
MEIS3P1A6NDR6 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC13.07□□□□□ -0.32
MEIS3P1A6NDR6 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
MEIS3P1A6NDR6 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC13.07□□□□□ -0.32
MEIS3P1A6NDR6 MFF-204ENST00000353339 2186 ntTSL 5 BASIC13.07□□□□□ -0.32
MEIS3P1A6NDR6 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
MEIS3P1A6NDR6 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC13.07□□□□□ -0.32
MEIS3P1A6NDR6 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC13.07□□□□□ -0.32
MEIS3P1A6NDR6 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
MEIS3P1A6NDR6 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
MEIS3P1A6NDR6 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
MEIS3P1A6NDR6 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
MEIS3P1A6NDR6 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC13.07□□□□□ -0.32
MEIS3P1A6NDR6 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
MEIS3P1A6NDR6 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
MEIS3P1A6NDR6 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
MEIS3P1A6NDR6 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC13.07□□□□□ -0.32
MEIS3P1A6NDR6 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms