RNA–Protein interactions for RNA: ENST00000011292.7

CPA1-201, Transcript of carboxypeptidase A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPA1, Length 1,487 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPA1-201ENST00000011292 NISCHQ9Y2I1 1504 aa36.84■■■■□ 3.49
CPA1-201ENST00000011292 CCDC180Q9P1Z9 1646 aa32.53■■■□□ 2.8
CPA1-201ENST00000011292 ABCC9O60706 1549 aa31.08■■■□□ 2.57
CPA1-201ENST00000011292 ZCCHC6Q5VYS8 1495 aaKnown RBP30.83■■■□□ 2.53
CPA1-201ENST00000011292 DCAF1Q9Y4B6 1507 aa30.54■■■□□ 2.48
CPA1-201ENST00000011292 DCAF8L2P0C7V8 631 aa30.53■■■□□ 2.48
CPA1-201ENST00000011292 MYO15BQ96JP2 1530 aa30.43■■■□□ 2.46
CPA1-201ENST00000011292 NACADO15069 1562 aa30.4■■■□□ 2.46
CPA1-201ENST00000011292 RB1CC1Q8TDY2 1594 aa30.28■■■□□ 2.44
CPA1-201ENST00000011292 SCRIBQ14160 1630 aa29.68■■■□□ 2.34
CPA1-201ENST00000011292 UNC13AQ9UPW8 1703 aa29.57■■■□□ 2.32
CPA1-201ENST00000011292 SHROOM4Q9ULL8 1493 aa29.5■■■□□ 2.31
CPA1-201ENST00000011292 BICRAQ9NZM4 1560 aa29.22■■■□□ 2.27
CPA1-201ENST00000011292 PABPN1Q86U42 306 aaKnown RBP eCLIP29.12■■■□□ 2.25
CPA1-201ENST00000011292 BAZ1AQ9NRL2 1556 aaPredicted RBP28.56■■■□□ 2.16
CPA1-201ENST00000011292 CECR2Q9BXF3 1484 aa28.55■■■□□ 2.16
CPA1-201ENST00000011292 SMARCA4P51532 1647 aa28.46■■■□□ 2.15
CPA1-201ENST00000011292 EIF4G1Q04637 1599 aaKnown RBP28.45■■■□□ 2.15
CPA1-201ENST00000011292 MROH2BQ7Z745 1585 aa28.36■■■□□ 2.13
CPA1-201ENST00000011292 RSF1Q96T23 1441 aaPredicted RBP28.29■■■□□ 2.12
CPA1-201ENST00000011292 SMARCA2P51531 1590 aa28.17■■■□□ 2.1
CPA1-201ENST00000011292 CC2D2AQ9P2K1 1620 aa28.17■■■□□ 2.1
CPA1-201ENST00000011292 PEG3Q9GZU2 1588 aa28.17■■■□□ 2.1
CPA1-201ENST00000011292 SUPT5HO00267 1087 aaKnown RBP28.15■■■□□ 2.1
CPA1-201ENST00000011292 WIZO95785 1651 aa28.14■■■□□ 2.09
CPA1-201ENST00000011292 ATAD2BQ9ULI0 1458 aa28.09■■■□□ 2.09
CPA1-201ENST00000011292 NCAPD3P42695 1498 aa27.98■■■□□ 2.07
CPA1-201ENST00000011292 HMGXB3Q12766 1538 aa27.95■■■□□ 2.07
CPA1-201ENST00000011292 BAZ1BQ9UIG0 1483 aaKnown RBP27.95■■■□□ 2.07
CPA1-201ENST00000011292 TOP2AP11388 1531 aaKnown RBP27.9■■■□□ 2.06
CPA1-201ENST00000011292 DNAJC5BQ9UF47 199 aa27.76■■■□□ 2.04
CPA1-201ENST00000011292 CCDC88BA6NC98 1476 aa27.53■■■□□ 2
CPA1-201ENST00000011292 CADPSQ9ULU8 1353 aa27.22■■□□□ 1.95
CPA1-201ENST00000011292 LAMC3Q9Y6N6 1575 aa27.2■■□□□ 1.94
CPA1-201ENST00000011292 CFTRP13569 1480 aa27.19■■□□□ 1.94
CPA1-201ENST00000011292 PRDM2Q13029 1718 aa27.16■■□□□ 1.94
CPA1-201ENST00000011292 NESP48681 1621 aa27.05■■□□□ 1.92
CPA1-201ENST00000011292 PDS5BQ9NTI5 1447 aa26.99■■□□□ 1.91
CPA1-201ENST00000011292 FANCD2Q9BXW9 1451 aa26.91■■□□□ 1.9
CPA1-201ENST00000011292 CEP164Q9UPV0 1460 aa26.85■■□□□ 1.89
CPA1-201ENST00000011292 KIF21AQ7Z4S6 1674 aa26.83■■□□□ 1.89
CPA1-201ENST00000011292 ERCC6Q03468 1493 aa26.81■■□□□ 1.88
CPA1-201ENST00000011292 ABCC8Q09428 1581 aa26.73■■□□□ 1.87
CPA1-201ENST00000011292 WRNQ14191 1432 aaPredicted RBP eCLIP26.71■■□□□ 1.87
CPA1-201ENST00000011292 MRC2Q9UBG0 1479 aa26.65■■□□□ 1.86
CPA1-201ENST00000011292 CHIC1Q5VXU3 224 aa26.63■■□□□ 1.85
CPA1-201ENST00000011292 DNMBPQ6XZF7 1577 aa26.61■■□□□ 1.85
CPA1-201ENST00000011292 TOP2BQ02880 1626 aa26.59■■□□□ 1.85
CPA1-201ENST00000011292 TRIM41Q8WV44 630 aa26.59■■□□□ 1.85
CPA1-201ENST00000011292 BIVM-ERCC5R4GMW8 1640 aa26.59■■□□□ 1.85
CPA1-201ENST00000011292 CUX1P39880 1505 aa26.58■■□□□ 1.85
CPA1-201ENST00000011292 SYNJ1O43426 1573 aa26.57■■□□□ 1.84
CPA1-201ENST00000011292 URB2Q14146 1524 aaKnown RBP26.55■■□□□ 1.84
CPA1-201ENST00000011292 TOPBP1Q92547 1522 aa26.55■■□□□ 1.84
CPA1-201ENST00000011292 THOC2Q8NI27 1593 aaKnown RBP26.54■■□□□ 1.84
CPA1-201ENST00000011292 WDR62O43379 1518 aa26.52■■□□□ 1.84
CPA1-201ENST00000011292 FGD5Q6ZNL6 1462 aa26.41■■□□□ 1.82
CPA1-201ENST00000011292 POLA1P09884 1462 aaPredicted RBP26.36■■□□□ 1.81
CPA1-201ENST00000011292 SOGA1O94964 1423 aa26.3■■□□□ 1.8
CPA1-201ENST00000011292 CUX2O14529 1486 aa26.26■■□□□ 1.79
CPA1-201ENST00000011292 IFT140Q96RY7 1462 aa26.25■■□□□ 1.79
CPA1-201ENST00000011292 RAD54L2Q9Y4B4 1467 aa26.21■■□□□ 1.79
CPA1-201ENST00000011292 ABCA10Q8WWZ4 1543 aa26.2■■□□□ 1.78
CPA1-201ENST00000011292 TARBP1Q13395 1621 aaKnown RBP26.19■■□□□ 1.78
CPA1-201ENST00000011292 WDR97A6NE52 1622 aa26.17■■□□□ 1.78
CPA1-201ENST00000011292 EEA1Q15075 1411 aa26.13■■□□□ 1.77
CPA1-201ENST00000011292 KIF27Q86VH2 1401 aa26.13■■□□□ 1.77
CPA1-201ENST00000011292 ABCA5Q8WWZ7 1642 aa26.04■■□□□ 1.76
CPA1-201ENST00000011292 TDRD9Q8NDG6 1382 aaKnown RBP26.02■■□□□ 1.76
CPA1-201ENST00000011292 GAPVD1Q14C86 1478 aa26.01■■□□□ 1.75
CPA1-201ENST00000011292 EIF4G3O43432 1585 aaKnown RBP25.99■■□□□ 1.75
CPA1-201ENST00000011292 ZNF608Q9ULD9 1512 aaPredicted RBP25.99■■□□□ 1.75
CPA1-201ENST00000011292 RUSC2Q8N2Y8 1516 aa25.98■■□□□ 1.75
CPA1-201ENST00000011292 FAM9AQ8IZU1 332 aaPredicted RBP25.97■■□□□ 1.75
CPA1-201ENST00000011292 PBRM1Q86U86 1689 aa25.95■■□□□ 1.74
CPA1-201ENST00000011292 AQRO60306 1485 aaKnown RBP eCLIP25.95■■□□□ 1.74
CPA1-201ENST00000011292 CSRNP3Q8WYN3 585 aa25.93■■□□□ 1.74
CPA1-201ENST00000011292 ERICH3Q5RHP9 1530 aa25.93■■□□□ 1.74
CPA1-201ENST00000011292 GRIN2BQ13224 1484 aa25.92■■□□□ 1.74
CPA1-201ENST00000011292 CUL7Q14999 1698 aa25.87■■□□□ 1.73
CPA1-201ENST00000011292 IGF1RP08069 1367 aa25.86■■□□□ 1.73
CPA1-201ENST00000011292 MAGI1Q96QZ7 1491 aaPredicted RBP25.79■■□□□ 1.72
CPA1-201ENST00000011292 KIF21BO75037 1637 aa25.77■■□□□ 1.72
CPA1-201ENST00000011292 CARMIL1Q5VZK9 1371 aa25.77■■□□□ 1.72
CPA1-201ENST00000011292 SNAPC4Q5SXM2 1469 aa25.76■■□□□ 1.71
CPA1-201ENST00000011292 ADAMTS12P58397 1594 aa25.74■■□□□ 1.71
CPA1-201ENST00000011292 PRXQ9BXM0 1461 aa25.74■■□□□ 1.71
CPA1-201ENST00000011292 FHAD1B1AJZ9 1412 aa25.74■■□□□ 1.71
CPA1-201ENST00000011292 RAPGEF2Q9Y4G8 1499 aa25.72■■□□□ 1.71
CPA1-201ENST00000011292 GOLGA3Q08378 1498 aa25.68■■□□□ 1.7
CPA1-201ENST00000011292 SYNJ2O15056 1496 aa25.67■■□□□ 1.7
CPA1-201ENST00000011292 CHMP7Q8WUX9 453 aaPredicted RBP25.62■■□□□ 1.69
CPA1-201ENST00000011292 FBLN2P98095 1184 aa25.57■■□□□ 1.68
CPA1-201ENST00000011292 GRIN2AQ12879 1464 aa25.57■■□□□ 1.68
CPA1-201ENST00000011292 UBTFP17480 764 aaKnown RBP25.56■■□□□ 1.68
CPA1-201ENST00000011292 EHMT2Q96KQ7 1210 aa25.56■■□□□ 1.68
CPA1-201ENST00000011292 CHD1O14646 1710 aa25.55■■□□□ 1.68
CPA1-201ENST00000011292 LOC105371045A0A1W2PR82 267 aa25.51■■□□□ 1.67
CPA1-201ENST00000011292 CTTNBP2Q8WZ74 1663 aa25.49■■□□□ 1.67
CPA1-201ENST00000011292 TNIKQ9UKE5 1360 aa25.46■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms