RNA–Protein interactions for RNA: ENST00000367306.5

CSRP1-202, Transcript of cysteine and glycine rich protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSRP1, Length 2,129 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-202ENST00000367306 NISCHQ9Y2I1 1504 aa32.43■■■□□ 2.78
CSRP1-202ENST00000367306 CCDC180Q9P1Z9 1646 aa28.33■■■□□ 2.13
CSRP1-202ENST00000367306 ZCCHC6Q5VYS8 1495 aaKnown RBP27.27■■□□□ 1.96
CSRP1-202ENST00000367306 ABCC9O60706 1549 aa26.86■■□□□ 1.89
CSRP1-202ENST00000367306 DCAF8L2P0C7V8 631 aa26.76■■□□□ 1.87
CSRP1-202ENST00000367306 DCAF1Q9Y4B6 1507 aa26.71■■□□□ 1.87
CSRP1-202ENST00000367306 SHROOM4Q9ULL8 1493 aa26.57■■□□□ 1.84
CSRP1-202ENST00000367306 MYO15BQ96JP2 1530 aa26.36■■□□□ 1.81
CSRP1-202ENST00000367306 NACADO15069 1562 aa26.28■■□□□ 1.8
CSRP1-202ENST00000367306 SCRIBQ14160 1630 aa26.17■■□□□ 1.78
CSRP1-202ENST00000367306 RB1CC1Q8TDY2 1594 aa26.11■■□□□ 1.77
CSRP1-202ENST00000367306 UNC13AQ9UPW8 1703 aa25.93■■□□□ 1.74
CSRP1-202ENST00000367306 BICRAQ9NZM4 1560 aa25.48■■□□□ 1.67
CSRP1-202ENST00000367306 SUPT5HO00267 1087 aaKnown RBP25.43■■□□□ 1.66
CSRP1-202ENST00000367306 CECR2Q9BXF3 1484 aa25.3■■□□□ 1.64
CSRP1-202ENST00000367306 PABPN1Q86U42 306 aaKnown RBP eCLIP25.28■■□□□ 1.64
CSRP1-202ENST00000367306 RSF1Q96T23 1441 aaPredicted RBP25.15■■□□□ 1.62
CSRP1-202ENST00000367306 MROH2BQ7Z745 1585 aa25.14■■□□□ 1.62
CSRP1-202ENST00000367306 WIZO95785 1651 aa25.02■■□□□ 1.6
CSRP1-202ENST00000367306 SMARCA4P51532 1647 aa25.02■■□□□ 1.6
CSRP1-202ENST00000367306 BAZ1AQ9NRL2 1556 aaPredicted RBP25.01■■□□□ 1.59
CSRP1-202ENST00000367306 EIF4G1Q04637 1599 aaKnown RBP24.65■■□□□ 1.54
CSRP1-202ENST00000367306 PEG3Q9GZU2 1588 aa24.63■■□□□ 1.53
CSRP1-202ENST00000367306 TOP2AP11388 1531 aaKnown RBP24.61■■□□□ 1.53
CSRP1-202ENST00000367306 ATAD2BQ9ULI0 1458 aa24.52■■□□□ 1.52
CSRP1-202ENST00000367306 SMARCA2P51531 1590 aa24.46■■□□□ 1.51
CSRP1-202ENST00000367306 BAZ1BQ9UIG0 1483 aaKnown RBP24.38■■□□□ 1.49
CSRP1-202ENST00000367306 CCDC88BA6NC98 1476 aa24.36■■□□□ 1.49
CSRP1-202ENST00000367306 CC2D2AQ9P2K1 1620 aa24.33■■□□□ 1.49
CSRP1-202ENST00000367306 CHIC1Q5VXU3 224 aa24.31■■□□□ 1.48
CSRP1-202ENST00000367306 HMGXB3Q12766 1538 aa24.27■■□□□ 1.48
CSRP1-202ENST00000367306 NCAPD3P42695 1498 aa24.23■■□□□ 1.47
CSRP1-202ENST00000367306 ABCC8Q09428 1581 aa23.99■■□□□ 1.43
CSRP1-202ENST00000367306 HRCP23327 699 aa23.99■■□□□ 1.43
CSRP1-202ENST00000367306 PRDM2Q13029 1718 aa23.85■■□□□ 1.41
CSRP1-202ENST00000367306 DNAJC5BQ9UF47 199 aa23.81■■□□□ 1.4
CSRP1-202ENST00000367306 TRIM41Q8WV44 630 aa23.8■■□□□ 1.4
CSRP1-202ENST00000367306 CFTRP13569 1480 aa23.74■■□□□ 1.39
CSRP1-202ENST00000367306 SYNJ1O43426 1573 aa23.72■■□□□ 1.39
CSRP1-202ENST00000367306 NESP48681 1621 aa23.64■■□□□ 1.37
CSRP1-202ENST00000367306 WRNQ14191 1432 aaPredicted RBP eCLIP23.64■■□□□ 1.37
CSRP1-202ENST00000367306 CADPSQ9ULU8 1353 aa23.61■■□□□ 1.37
CSRP1-202ENST00000367306 PCGF6Q9BYE7 350 aa23.6■■□□□ 1.37
CSRP1-202ENST00000367306 BIVM-ERCC5R4GMW8 1640 aa23.54■■□□□ 1.36
CSRP1-202ENST00000367306 TOP2BQ02880 1626 aa23.52■■□□□ 1.36
CSRP1-202ENST00000367306 FAM9AQ8IZU1 332 aaPredicted RBP23.52■■□□□ 1.36
CSRP1-202ENST00000367306 CUX1P39880 1505 aa23.51■■□□□ 1.35
CSRP1-202ENST00000367306 LAMC3Q9Y6N6 1575 aa23.48■■□□□ 1.35
CSRP1-202ENST00000367306 KIF21AQ7Z4S6 1674 aa23.44■■□□□ 1.34
CSRP1-202ENST00000367306 LOC105371045A0A1W2PR82 267 aa23.44■■□□□ 1.34
CSRP1-202ENST00000367306 FANCD2Q9BXW9 1451 aa23.43■■□□□ 1.34
CSRP1-202ENST00000367306 SOGA1O94964 1423 aa23.43■■□□□ 1.34
CSRP1-202ENST00000367306 RUSC2Q8N2Y8 1516 aa23.42■■□□□ 1.34
CSRP1-202ENST00000367306 TRIM26Q12899 539 aaPredicted RBP23.32■■□□□ 1.32
CSRP1-202ENST00000367306 EHMT2Q96KQ7 1210 aa23.3■■□□□ 1.32
CSRP1-202ENST00000367306 CEP164Q9UPV0 1460 aa23.27■■□□□ 1.32
CSRP1-202ENST00000367306 DNMBPQ6XZF7 1577 aa23.24■■□□□ 1.31
CSRP1-202ENST00000367306 URB2Q14146 1524 aaKnown RBP23.22■■□□□ 1.31
CSRP1-202ENST00000367306 FGD5Q6ZNL6 1462 aa23.21■■□□□ 1.31
CSRP1-202ENST00000367306 TOPBP1Q92547 1522 aa23.21■■□□□ 1.31
CSRP1-202ENST00000367306 PDS5BQ9NTI5 1447 aa23.19■■□□□ 1.3
CSRP1-202ENST00000367306 EEA1Q15075 1411 aa23.14■■□□□ 1.29
CSRP1-202ENST00000367306 ZEB1P37275 1124 aaPredicted RBP23.14■■□□□ 1.29
CSRP1-202ENST00000367306 POLA1P09884 1462 aaPredicted RBP23.11■■□□□ 1.29
CSRP1-202ENST00000367306 PPARGC1BQ86YN6 1023 aaKnown RBP23.1■■□□□ 1.29
CSRP1-202ENST00000367306 WDR97A6NE52 1622 aa23.07■■□□□ 1.28
CSRP1-202ENST00000367306 RAD54L2Q9Y4B4 1467 aa23.06■■□□□ 1.28
CSRP1-202ENST00000367306 CSRNP3Q8WYN3 585 aa23.06■■□□□ 1.28
CSRP1-202ENST00000367306 KIF21BO75037 1637 aa23.04■■□□□ 1.28
CSRP1-202ENST00000367306 CUX2O14529 1486 aa23.02■■□□□ 1.28
CSRP1-202ENST00000367306 MRC2Q9UBG0 1479 aa22.99■■□□□ 1.27
CSRP1-202ENST00000367306 KIF27Q86VH2 1401 aa22.98■■□□□ 1.27
CSRP1-202ENST00000367306 THOC2Q8NI27 1593 aaKnown RBP22.97■■□□□ 1.27
CSRP1-202ENST00000367306 RAPGEF2Q9Y4G8 1499 aa22.96■■□□□ 1.27
CSRP1-202ENST00000367306 GOLGA3Q08378 1498 aa22.94■■□□□ 1.26
CSRP1-202ENST00000367306 ABCA10Q8WWZ4 1543 aa22.94■■□□□ 1.26
CSRP1-202ENST00000367306 ERCC6Q03468 1493 aa22.93■■□□□ 1.26
CSRP1-202ENST00000367306 TARBP1Q13395 1621 aaKnown RBP22.93■■□□□ 1.26
CSRP1-202ENST00000367306 WDR62O43379 1518 aa22.92■■□□□ 1.26
CSRP1-202ENST00000367306 PRXQ9BXM0 1461 aa22.88■■□□□ 1.25
CSRP1-202ENST00000367306 ABCA5Q8WWZ7 1642 aa22.88■■□□□ 1.25
CSRP1-202ENST00000367306 ERICH3Q5RHP9 1530 aa22.83■■□□□ 1.25
CSRP1-202ENST00000367306 TNIKQ9UKE5 1360 aa22.81■■□□□ 1.24
CSRP1-202ENST00000367306 IGF1RP08069 1367 aa22.81■■□□□ 1.24
CSRP1-202ENST00000367306 UBTFP17480 764 aaKnown RBP22.8■■□□□ 1.24
CSRP1-202ENST00000367306 CEP162Q5TB80 1403 aa22.8■■□□□ 1.24
CSRP1-202ENST00000367306 PBRM1Q86U86 1689 aa22.79■■□□□ 1.24
CSRP1-202ENST00000367306 TDRD9Q8NDG6 1382 aaKnown RBP22.78■■□□□ 1.24
CSRP1-202ENST00000367306 CUL7Q14999 1698 aa22.72■■□□□ 1.23
CSRP1-202ENST00000367306 ZNF608Q9ULD9 1512 aaPredicted RBP22.71■■□□□ 1.23
CSRP1-202ENST00000367306 GAPVD1Q14C86 1478 aa22.71■■□□□ 1.23
CSRP1-202ENST00000367306 CARMIL1Q5VZK9 1371 aa22.68■■□□□ 1.22
CSRP1-202ENST00000367306 AQRO60306 1485 aaKnown RBP eCLIP22.67■■□□□ 1.22
CSRP1-202ENST00000367306 EIF4G3O43432 1585 aaKnown RBP22.67■■□□□ 1.22
CSRP1-202ENST00000367306 IFT140Q96RY7 1462 aa22.65■■□□□ 1.22
CSRP1-202ENST00000367306 CTTNBP2Q8WZ74 1663 aa22.61■■□□□ 1.21
CSRP1-202ENST00000367306 RANGAP1P46060 587 aaPredicted RBP22.6■■□□□ 1.21
CSRP1-202ENST00000367306 CLIP1P30622 1438 aa22.58■■□□□ 1.21
CSRP1-202ENST00000367306 ADAMTS12P58397 1594 aa22.57■■□□□ 1.2
CSRP1-202ENST00000367306 GRIN2BQ13224 1484 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms