RNA–Protein interactions for RNA: ENST00000218548.10

ATP12A-201, Transcript of ATPase H+/K+ transporting non-gastric alpha2 subunit, humanhuman

TSL 1 (best) BASIC

Gene ATP12A, Length 3,732 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP12A-201ENST00000218548 NISCHQ9Y2I1 1504 aa27.8■■■□□ 2.04
ATP12A-201ENST00000218548 SHROOM4Q9ULL8 1493 aa25.26■■□□□ 1.63
ATP12A-201ENST00000218548 SUPT5HO00267 1087 aaKnown RBP24.89■■□□□ 1.58
ATP12A-201ENST00000218548 DCAF8L2P0C7V8 631 aa24.83■■□□□ 1.57
ATP12A-201ENST00000218548 CHIC1Q5VXU3 224 aa23.6■■□□□ 1.37
ATP12A-201ENST00000218548 PCGF6Q9BYE7 350 aa23.59■■□□□ 1.37
ATP12A-201ENST00000218548 EHMT2Q96KQ7 1210 aa23.57■■□□□ 1.36
ATP12A-201ENST00000218548 LOC105371045A0A1W2PR82 267 aa23.47■■□□□ 1.35
ATP12A-201ENST00000218548 MYO15BQ96JP2 1530 aa23.45■■□□□ 1.34
ATP12A-201ENST00000218548 ZCCHC6Q5VYS8 1495 aaKnown RBP23.39■■□□□ 1.34
ATP12A-201ENST00000218548 PPARGC1BQ86YN6 1023 aaKnown RBP23.31■■□□□ 1.32
ATP12A-201ENST00000218548 FAM9AQ8IZU1 332 aaPredicted RBP23.24■■□□□ 1.31
ATP12A-201ENST00000218548 HRCP23327 699 aa23.08■■□□□ 1.28
ATP12A-201ENST00000218548 CCDC180Q9P1Z9 1646 aa22.9■■□□□ 1.26
ATP12A-201ENST00000218548 TRIM41Q8WV44 630 aa22.77■■□□□ 1.23
ATP12A-201ENST00000218548 TTBK1Q5TCY1 1321 aaPredicted RBP22.72■■□□□ 1.23
ATP12A-201ENST00000218548 SCRIBQ14160 1630 aa22.55■■□□□ 1.2
ATP12A-201ENST00000218548 ABCC9O60706 1549 aa22.52■■□□□ 1.2
ATP12A-201ENST00000218548 TRIM26Q12899 539 aaPredicted RBP22.49■■□□□ 1.19
ATP12A-201ENST00000218548 RSF1Q96T23 1441 aaPredicted RBP22.33■■□□□ 1.17
ATP12A-201ENST00000218548 DCAF1Q9Y4B6 1507 aa22.2■■□□□ 1.15
ATP12A-201ENST00000218548 CECR2Q9BXF3 1484 aa22.18■■□□□ 1.14
ATP12A-201ENST00000218548 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.17■■□□□ 1.14
ATP12A-201ENST00000218548 RB1CC1Q8TDY2 1594 aa22.15■■□□□ 1.14
ATP12A-201ENST00000218548 RANGAP1P46060 587 aaPredicted RBP22.12■■□□□ 1.13
ATP12A-201ENST00000218548 PABPN1Q86U42 306 aaKnown RBP eCLIP22.03■■□□□ 1.12
ATP12A-201ENST00000218548 CCER1Q8TC90 406 aaPredicted RBP21.99■■□□□ 1.11
ATP12A-201ENST00000218548 MROH2BQ7Z745 1585 aa21.91■■□□□ 1.1
ATP12A-201ENST00000218548 UBTFP17480 764 aaKnown RBP21.89■■□□□ 1.09
ATP12A-201ENST00000218548 ZEB1P37275 1124 aaPredicted RBP21.78■■□□□ 1.08
ATP12A-201ENST00000218548 WIZO95785 1651 aa21.78■■□□□ 1.08
ATP12A-201ENST00000218548 HNRNPUL2Q1KMD3 747 aaKnown RBP21.65■■□□□ 1.06
ATP12A-201ENST00000218548 ABCC8Q09428 1581 aa21.63■■□□□ 1.05
ATP12A-201ENST00000218548 SCAF1Q9H7N4 1312 aaKnown RBP21.62■■□□□ 1.05
ATP12A-201ENST00000218548 YTHDC1Q96MU7 727 aaKnown RBP21.59■■□□□ 1.05
ATP12A-201ENST00000218548 CCDC88BA6NC98 1476 aa21.54■■□□□ 1.04
ATP12A-201ENST00000218548 SOGA1O94964 1423 aa21.54■■□□□ 1.04
ATP12A-201ENST00000218548 NACADO15069 1562 aa21.46■■□□□ 1.03
ATP12A-201ENST00000218548 RUSC2Q8N2Y8 1516 aa21.46■■□□□ 1.03
ATP12A-201ENST00000218548 DIEXFQ68CQ4 756 aaKnown RBP21.45■■□□□ 1.02
ATP12A-201ENST00000218548 CSRNP3Q8WYN3 585 aa21.45■■□□□ 1.02
ATP12A-201ENST00000218548 NEUROD1Q13562 356 aa21.41■■□□□ 1.02
ATP12A-201ENST00000218548 CEP162Q5TB80 1403 aa21.34■■□□□ 1.01
ATP12A-201ENST00000218548 APLP2Q06481 763 aa21.3■■□□□ 1
ATP12A-201ENST00000218548 GTF3C3Q9Y5Q9 886 aa21.28■■□□□ 1
ATP12A-201ENST00000218548 ITGAEP38570 1179 aa21.27■■□□□ 1
ATP12A-201ENST00000218548 BAZ1AQ9NRL2 1556 aaPredicted RBP21.26■□□□□ 0.99
ATP12A-201ENST00000218548 ACIN1Q9UKV3 1341 aaKnown RBP21.18■□□□□ 0.98
ATP12A-201ENST00000218548 SMARCA4P51532 1647 aa21.08■□□□□ 0.96
ATP12A-201ENST00000218548 SMARCA2P51531 1590 aa21.07■□□□□ 0.96
ATP12A-201ENST00000218548 CENPBP07199 599 aaPredicted RBP21.07■□□□□ 0.96
ATP12A-201ENST00000218548 ATP1B4Q9UN42 357 aaPredicted RBP21.07■□□□□ 0.96
ATP12A-201ENST00000218548 TOP2AP11388 1531 aaKnown RBP21.06■□□□□ 0.96
ATP12A-201ENST00000218548 WRNQ14191 1432 aaPredicted RBP eCLIP21.06■□□□□ 0.96
ATP12A-201ENST00000218548 ZNF316A6NFI3 1004 aaPredicted RBP21.05■□□□□ 0.96
ATP12A-201ENST00000218548 MIER1Q8N108 512 aa21.05■□□□□ 0.96
ATP12A-201ENST00000218548 TNIKQ9UKE5 1360 aa21.05■□□□□ 0.96
ATP12A-201ENST00000218548 CLIP1P30622 1438 aa20.96■□□□□ 0.95
ATP12A-201ENST00000218548 GOLGA3Q08378 1498 aa20.91■□□□□ 0.94
ATP12A-201ENST00000218548 P3H3Q8IVL6 736 aa20.91■□□□□ 0.94
ATP12A-201ENST00000218548 EIF4G1Q04637 1599 aaKnown RBP20.9■□□□□ 0.94
ATP12A-201ENST00000218548 KANK4Q5T7N3 995 aaPredicted RBP20.89■□□□□ 0.93
ATP12A-201ENST00000218548 RAPGEF2Q9Y4G8 1499 aa20.86■□□□□ 0.93
ATP12A-201ENST00000218548 UNC13AQ9UPW8 1703 aa20.84■□□□□ 0.93
ATP12A-201ENST00000218548 BAZ1BQ9UIG0 1483 aaKnown RBP20.79■□□□□ 0.92
ATP12A-201ENST00000218548 SYNJ1O43426 1573 aa20.79■□□□□ 0.92
ATP12A-201ENST00000218548 HIRIP3Q9BW71 556 aaPredicted RBP20.73■□□□□ 0.91
ATP12A-201ENST00000218548 CEP164Q9UPV0 1460 aa20.73■□□□□ 0.91
ATP12A-201ENST00000218548 PELP1Q8IZL8 1130 aaKnown RBP20.72■□□□□ 0.91
ATP12A-201ENST00000218548 ATAD2BQ9ULI0 1458 aa20.71■□□□□ 0.91
ATP12A-201ENST00000218548 BICRAQ9NZM4 1560 aa20.71■□□□□ 0.91
ATP12A-201ENST00000218548 EEA1Q15075 1411 aa20.71■□□□□ 0.91
ATP12A-201ENST00000218548 FAM50AQ14320 339 aaKnown RBP20.68■□□□□ 0.9
ATP12A-201ENST00000218548 VPS8Q8N3P4 1428 aa20.64■□□□□ 0.9
ATP12A-201ENST00000218548 KCNH8Q96L42 1107 aa20.59■□□□□ 0.89
ATP12A-201ENST00000218548 BCANQ96GW7 911 aa20.56■□□□□ 0.88
ATP12A-201ENST00000218548 ARID3CA6NKF2 412 aa20.53■□□□□ 0.88
ATP12A-201ENST00000218548 SIN3AQ96ST3 1273 aa20.53■□□□□ 0.88
ATP12A-201ENST00000218548 KIF21BO75037 1637 aa20.5■□□□□ 0.87
ATP12A-201ENST00000218548 DDX10Q13206 875 aaKnown RBP20.45■□□□□ 0.86
ATP12A-201ENST00000218548 DHX57Q6P158 1386 aaKnown RBP20.43■□□□□ 0.86
ATP12A-201ENST00000218548 ARAP1Q96P48 1450 aa20.42■□□□□ 0.86
ATP12A-201ENST00000218548 CNGB1Q14028 1251 aaPredicted RBP20.4■□□□□ 0.86
ATP12A-201ENST00000218548 KIF27Q86VH2 1401 aa20.35■□□□□ 0.85
ATP12A-201ENST00000218548 CUX2O14529 1486 aa20.34■□□□□ 0.85
ATP12A-201ENST00000218548 CCNB3Q8WWL7 1395 aa20.31■□□□□ 0.84
ATP12A-201ENST00000218548 TRIM52Q96A61 297 aa20.3■□□□□ 0.84
ATP12A-201ENST00000218548 CUX1P39880 1505 aa20.28■□□□□ 0.84
ATP12A-201ENST00000218548 RAB3GAP2Q9H2M9 1393 aa20.27■□□□□ 0.83
ATP12A-201ENST00000218548 CHIC2Q9UKJ5 165 aa20.25■□□□□ 0.83
ATP12A-201ENST00000218548 PRXQ9BXM0 1461 aa20.23■□□□□ 0.83
ATP12A-201ENST00000218548 TOP2BQ02880 1626 aa20.23■□□□□ 0.83
ATP12A-201ENST00000218548 SUPT16HQ9Y5B9 1047 aaKnown RBP20.22■□□□□ 0.83
ATP12A-201ENST00000218548 CARMIL1Q5VZK9 1371 aa20.21■□□□□ 0.83
ATP12A-201ENST00000218548 PEG3Q9GZU2 1588 aa20.21■□□□□ 0.83
ATP12A-201ENST00000218548 ARHGAP35Q9NRY4 1499 aa20.21■□□□□ 0.83
ATP12A-201ENST00000218548 DNAJC5BQ9UF47 199 aa20.2■□□□□ 0.83
ATP12A-201ENST00000218548 IGF1RP08069 1367 aa20.2■□□□□ 0.82
ATP12A-201ENST00000218548 SENP3-EIF4A1A0A087X0R7 540 aa20.17■□□□□ 0.82
ATP12A-201ENST00000218548 PHLDB1Q86UU1 1377 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms