RNA–Protein interactions for RNA: ENST00000396617.7

MKL1-202, Transcript of MKL/myocardin-like protein 1, humanhuman

TSL 1 (best) BASIC

Gene MKL1, Length 4,505 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKL1-202ENST00000396617 NISCHQ9Y2I1 1504 aa26.54■■□□□ 1.84
MKL1-202ENST00000396617 DCAF8L2P0C7V8 631 aa25.04■■□□□ 1.6
MKL1-202ENST00000396617 SUPT5HO00267 1087 aaKnown RBP24.25■■□□□ 1.47
MKL1-202ENST00000396617 SHROOM4Q9ULL8 1493 aa24.21■■□□□ 1.47
MKL1-202ENST00000396617 EHMT2Q96KQ7 1210 aa22.83■■□□□ 1.25
MKL1-202ENST00000396617 FAM9AQ8IZU1 332 aaPredicted RBP22.66■■□□□ 1.22
MKL1-202ENST00000396617 TRIM41Q8WV44 630 aa22.55■■□□□ 1.2
MKL1-202ENST00000396617 PCGF6Q9BYE7 350 aa22.54■■□□□ 1.2
MKL1-202ENST00000396617 CHIC1Q5VXU3 224 aa22.37■■□□□ 1.17
MKL1-202ENST00000396617 APLP2Q06481 763 aa22.21■■□□□ 1.15
MKL1-202ENST00000396617 ZCCHC6Q5VYS8 1495 aaKnown RBP22.15■■□□□ 1.14
MKL1-202ENST00000396617 CCDC180Q9P1Z9 1646 aa22.07■■□□□ 1.12
MKL1-202ENST00000396617 ABCC9O60706 1549 aa22.06■■□□□ 1.12
MKL1-202ENST00000396617 TTBK1Q5TCY1 1321 aaPredicted RBP22.05■■□□□ 1.12
MKL1-202ENST00000396617 LOC105371045A0A1W2PR82 267 aa22.01■■□□□ 1.11
MKL1-202ENST00000396617 ZEB1P37275 1124 aaPredicted RBP21.98■■□□□ 1.11
MKL1-202ENST00000396617 UBTFP17480 764 aaKnown RBP21.96■■□□□ 1.11
MKL1-202ENST00000396617 TRIM26Q12899 539 aaPredicted RBP21.88■■□□□ 1.09
MKL1-202ENST00000396617 RANGAP1P46060 587 aaPredicted RBP21.85■■□□□ 1.09
MKL1-202ENST00000396617 CCER1Q8TC90 406 aaPredicted RBP21.79■■□□□ 1.08
MKL1-202ENST00000396617 HRCP23327 699 aa21.78■■□□□ 1.08
MKL1-202ENST00000396617 PPARGC1BQ86YN6 1023 aaKnown RBP21.72■■□□□ 1.07
MKL1-202ENST00000396617 PABPN1Q86U42 306 aaKnown RBP eCLIP21.59■■□□□ 1.05
MKL1-202ENST00000396617 SCRIBQ14160 1630 aa21.55■■□□□ 1.04
MKL1-202ENST00000396617 ATP1B4Q9UN42 357 aaPredicted RBP21.46■■□□□ 1.03
MKL1-202ENST00000396617 CENPBP07199 599 aaPredicted RBP21.34■■□□□ 1.01
MKL1-202ENST00000396617 DCAF1Q9Y4B6 1507 aa21.29■■□□□ 1
MKL1-202ENST00000396617 PELP1Q8IZL8 1130 aaKnown RBP21.27■■□□□ 1
MKL1-202ENST00000396617 HNRNPUL2Q1KMD3 747 aaKnown RBP21.17■□□□□ 0.98
MKL1-202ENST00000396617 RSF1Q96T23 1441 aaPredicted RBP21.15■□□□□ 0.98
MKL1-202ENST00000396617 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.12■□□□□ 0.97
MKL1-202ENST00000396617 NACADO15069 1562 aa21.09■□□□□ 0.97
MKL1-202ENST00000396617 CSRNP3Q8WYN3 585 aa21.08■□□□□ 0.96
MKL1-202ENST00000396617 MYO15BQ96JP2 1530 aa21.07■□□□□ 0.96
MKL1-202ENST00000396617 RB1CC1Q8TDY2 1594 aa21.05■□□□□ 0.96
MKL1-202ENST00000396617 ITGAEP38570 1179 aa21.05■□□□□ 0.96
MKL1-202ENST00000396617 YTHDC1Q96MU7 727 aaKnown RBP20.96■□□□□ 0.95
MKL1-202ENST00000396617 DIEXFQ68CQ4 756 aaKnown RBP20.79■□□□□ 0.92
MKL1-202ENST00000396617 CECR2Q9BXF3 1484 aa20.78■□□□□ 0.92
MKL1-202ENST00000396617 BAZ1AQ9NRL2 1556 aaPredicted RBP20.7■□□□□ 0.9
MKL1-202ENST00000396617 FAM50AQ14320 339 aaKnown RBP20.68■□□□□ 0.9
MKL1-202ENST00000396617 NEFLP07196 543 aa20.6■□□□□ 0.89
MKL1-202ENST00000396617 EEA1Q15075 1411 aa20.58■□□□□ 0.89
MKL1-202ENST00000396617 MROH2BQ7Z745 1585 aa20.57■□□□□ 0.88
MKL1-202ENST00000396617 WRNQ14191 1432 aaPredicted RBP eCLIP20.51■□□□□ 0.87
MKL1-202ENST00000396617 ZNF316A6NFI3 1004 aaPredicted RBP20.51■□□□□ 0.87
MKL1-202ENST00000396617 P3H3Q8IVL6 736 aa20.51■□□□□ 0.87
MKL1-202ENST00000396617 BAZ1BQ9UIG0 1483 aaKnown RBP20.49■□□□□ 0.87
MKL1-202ENST00000396617 CEP162Q5TB80 1403 aa20.46■□□□□ 0.87
MKL1-202ENST00000396617 CLIP1P30622 1438 aa20.44■□□□□ 0.86
MKL1-202ENST00000396617 GOLGA3Q08378 1498 aa20.44■□□□□ 0.86
MKL1-202ENST00000396617 NEUROD1Q13562 356 aa20.43■□□□□ 0.86
MKL1-202ENST00000396617 TNIKQ9UKE5 1360 aa20.39■□□□□ 0.86
MKL1-202ENST00000396617 TRIM52Q96A61 297 aa20.36■□□□□ 0.85
MKL1-202ENST00000396617 MYT1Q01538 1121 aa20.35■□□□□ 0.85
MKL1-202ENST00000396617 CCDC88BA6NC98 1476 aa20.33■□□□□ 0.85
MKL1-202ENST00000396617 POLR3GLQ9BT43 218 aa20.32■□□□□ 0.84
MKL1-202ENST00000396617 WIZO95785 1651 aa20.3■□□□□ 0.84
MKL1-202ENST00000396617 CEP164Q9UPV0 1460 aa20.3■□□□□ 0.84
MKL1-202ENST00000396617 FBLN2P98095 1184 aa20.26■□□□□ 0.83
MKL1-202ENST00000396617 SOGA1O94964 1423 aa20.26■□□□□ 0.83
MKL1-202ENST00000396617 MYT1LQ9UL68 1186 aa20.25■□□□□ 0.83
MKL1-202ENST00000396617 ERICH6Q7L0X2 663 aa20.24■□□□□ 0.83
MKL1-202ENST00000396617 GTF3C3Q9Y5Q9 886 aa20.22■□□□□ 0.83
MKL1-202ENST00000396617 TOP2AP11388 1531 aaKnown RBP20.21■□□□□ 0.83
MKL1-202ENST00000396617 ABCC8Q09428 1581 aa20.21■□□□□ 0.83
MKL1-202ENST00000396617 KIF27Q86VH2 1401 aa20.2■□□□□ 0.82
MKL1-202ENST00000396617 ACIN1Q9UKV3 1341 aaKnown RBP20.19■□□□□ 0.82
MKL1-202ENST00000396617 ARID3CA6NKF2 412 aa20.18■□□□□ 0.82
MKL1-202ENST00000396617 CNGB1Q14028 1251 aaPredicted RBP20.15■□□□□ 0.82
MKL1-202ENST00000396617 SMARCA2P51531 1590 aa20.11■□□□□ 0.81
MKL1-202ENST00000396617 ANP32CO43423 234 aa20.11■□□□□ 0.81
MKL1-202ENST00000396617 CDK11AQ9UQ88 783 aaPredicted RBP20.1■□□□□ 0.81
MKL1-202ENST00000396617 SMARCA4P51532 1647 aa20.08■□□□□ 0.8
MKL1-202ENST00000396617 MTUS2Q5JR59 1369 aa20.02■□□□□ 0.79
MKL1-202ENST00000396617 ZNF326Q5BKZ1 582 aaKnown RBP19.99■□□□□ 0.79
MKL1-202ENST00000396617 TONSLQ96HA7 1378 aa19.99■□□□□ 0.79
MKL1-202ENST00000396617 ZNF777Q9ULD5 760 aaPredicted RBP19.97■□□□□ 0.79
MKL1-202ENST00000396617 ATAD2BQ9ULI0 1458 aa19.96■□□□□ 0.79
MKL1-202ENST00000396617 VPS8Q8N3P4 1428 aa19.93■□□□□ 0.78
MKL1-202ENST00000396617 CUX2O14529 1486 aa19.91■□□□□ 0.78
MKL1-202ENST00000396617 CHIC2Q9UKJ5 165 aa19.89■□□□□ 0.78
MKL1-202ENST00000396617 CARMIL1Q5VZK9 1371 aa19.89■□□□□ 0.77
MKL1-202ENST00000396617 DDX10Q13206 875 aaKnown RBP19.86■□□□□ 0.77
MKL1-202ENST00000396617 MIER1Q8N108 512 aa19.86■□□□□ 0.77
MKL1-202ENST00000396617 BCANQ96GW7 911 aa19.83■□□□□ 0.76
MKL1-202ENST00000396617 CHMP7Q8WUX9 453 aaPredicted RBP19.81■□□□□ 0.76
MKL1-202ENST00000396617 CLSPNQ9HAW4 1339 aa19.8■□□□□ 0.76
MKL1-202ENST00000396617 RUSC2Q8N2Y8 1516 aa19.8■□□□□ 0.76
MKL1-202ENST00000396617 FHAD1B1AJZ9 1412 aa19.79■□□□□ 0.76
MKL1-202ENST00000396617 CCNB3Q8WWL7 1395 aa19.78■□□□□ 0.76
MKL1-202ENST00000396617 SCAF1Q9H7N4 1312 aaKnown RBP19.75■□□□□ 0.75
MKL1-202ENST00000396617 RRP7BPQ9NSQ0 103 aa19.72■□□□□ 0.75
MKL1-202ENST00000396617 RAPGEF2Q9Y4G8 1499 aa19.72■□□□□ 0.75
MKL1-202ENST00000396617 CADPSQ9ULU8 1353 aa19.72■□□□□ 0.75
MKL1-202ENST00000396617 KANK4Q5T7N3 995 aaPredicted RBP19.72■□□□□ 0.75
MKL1-202ENST00000396617 SLC4A1APQ9BWU0 796 aaKnown RBP19.71■□□□□ 0.75
MKL1-202ENST00000396617 TSPY4P0CV99 314 aa19.66■□□□□ 0.74
MKL1-202ENST00000396617 TSPY10P0CW01 314 aa19.66■□□□□ 0.74
MKL1-202ENST00000396617 HIRIP3Q9BW71 556 aaPredicted RBP19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms