Protein–RNA interactions for Protein: Q9BQ75

CMSS1, Protein CMSS1, humanhuman

Known RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1Q9BQ75 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
CMSS1Q9BQ75 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CMSS1Q9BQ75 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
CMSS1Q9BQ75 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CMSS1Q9BQ75 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CMSS1Q9BQ75 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CMSS1Q9BQ75 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
CMSS1Q9BQ75 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC13.12□□□□□ -0.31
CMSS1Q9BQ75 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC13.12□□□□□ -0.31
CMSS1Q9BQ75 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC13.12□□□□□ -0.31
CMSS1Q9BQ75 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
CMSS1Q9BQ75 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CMSS1Q9BQ75 AC040169.1-201ENST00000565382 521 ntBASIC13.12□□□□□ -0.31
CMSS1Q9BQ75 CMC2-214ENST00000565925 640 ntTSL 5 BASIC13.12□□□□□ -0.31
CMSS1Q9BQ75 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC13.12□□□□□ -0.31
CMSS1Q9BQ75 AC105021.1-202ENST00000570572 669 ntBASIC13.12□□□□□ -0.31
CMSS1Q9BQ75 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC13.12□□□□□ -0.31
CMSS1Q9BQ75 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC13.12□□□□□ -0.31
CMSS1Q9BQ75 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
CMSS1Q9BQ75 TNN-203ENST00000622870 3719 ntTSL 5 BASIC13.12□□□□□ -0.31
CMSS1Q9BQ75 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
CMSS1Q9BQ75 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC13.12□□□□□ -0.31
CMSS1Q9BQ75 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CMSS1Q9BQ75 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CMSS1Q9BQ75 GRN-214ENST00000589265 1632 ntTSL 5 BASIC13.12□□□□□ -0.31
CMSS1Q9BQ75 ADAMTS7P1-201ENST00000613213 4793 ntBASIC13.12□□□□□ -0.31
CMSS1Q9BQ75 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.12□□□□□ -0.31
CMSS1Q9BQ75 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
CMSS1Q9BQ75 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CMSS1Q9BQ75 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC13.12□□□□□ -0.31
CMSS1Q9BQ75 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CMSS1Q9BQ75 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CMSS1Q9BQ75 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CMSS1Q9BQ75 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CMSS1Q9BQ75 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CMSS1Q9BQ75 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CMSS1Q9BQ75 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CMSS1Q9BQ75 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC13.12□□□□□ -0.31
CMSS1Q9BQ75 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CMSS1Q9BQ75 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
CMSS1Q9BQ75 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CMSS1Q9BQ75 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CMSS1Q9BQ75 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC13.11□□□□□ -0.31
CMSS1Q9BQ75 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CMSS1Q9BQ75 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CMSS1Q9BQ75 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC13.11□□□□□ -0.31
CMSS1Q9BQ75 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC13.11□□□□□ -0.31
CMSS1Q9BQ75 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC13.11□□□□□ -0.31
CMSS1Q9BQ75 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CMSS1Q9BQ75 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CMSS1Q9BQ75 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC13.11□□□□□ -0.31
CMSS1Q9BQ75 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC13.11□□□□□ -0.31
CMSS1Q9BQ75 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
CMSS1Q9BQ75 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CMSS1Q9BQ75 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC13.11□□□□□ -0.31
CMSS1Q9BQ75 RBM39-205ENST00000397370 612 ntTSL 2 BASIC13.11□□□□□ -0.31
CMSS1Q9BQ75 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CMSS1Q9BQ75 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
CMSS1Q9BQ75 MCCD1P2-201ENST00000423228 335 ntBASIC13.11□□□□□ -0.31
CMSS1Q9BQ75 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC13.11□□□□□ -0.31
CMSS1Q9BQ75 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC13.11□□□□□ -0.31
CMSS1Q9BQ75 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CMSS1Q9BQ75 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CMSS1Q9BQ75 AC011467.4-201ENST00000594891 528 ntBASIC13.11□□□□□ -0.31
CMSS1Q9BQ75 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC13.11□□□□□ -0.31
CMSS1Q9BQ75 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CMSS1Q9BQ75 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC13.11□□□□□ -0.31
CMSS1Q9BQ75 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CMSS1Q9BQ75 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
CMSS1Q9BQ75 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CMSS1Q9BQ75 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CMSS1Q9BQ75 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CMSS1Q9BQ75 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CMSS1Q9BQ75 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CMSS1Q9BQ75 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CMSS1Q9BQ75 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CMSS1Q9BQ75 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC13.11□□□□□ -0.31
CMSS1Q9BQ75 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
CMSS1Q9BQ75 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CMSS1Q9BQ75 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CMSS1Q9BQ75 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC13.11□□□□□ -0.31
CMSS1Q9BQ75 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
CMSS1Q9BQ75 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CMSS1Q9BQ75 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
CMSS1Q9BQ75 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
CMSS1Q9BQ75 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC13.11□□□□□ -0.31
CMSS1Q9BQ75 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
CMSS1Q9BQ75 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CMSS1Q9BQ75 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC13.11□□□□□ -0.31
CMSS1Q9BQ75 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CMSS1Q9BQ75 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC13.1□□□□□ -0.31
CMSS1Q9BQ75 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC13.1□□□□□ -0.31
CMSS1Q9BQ75 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC13.1□□□□□ -0.31
CMSS1Q9BQ75 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC13.1□□□□□ -0.31
CMSS1Q9BQ75 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CMSS1Q9BQ75 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CMSS1Q9BQ75 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CMSS1Q9BQ75 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CMSS1Q9BQ75 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC13.1□□□□□ -0.31
CMSS1Q9BQ75 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms