RNA–Protein interactions for RNA: ENST00000397370.3

RBM39-205, Transcript of RNA binding motif protein 39, humanhuman

TSL 2 BASIC

Gene RBM39, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-205ENST00000397370 NISCHQ9Y2I1 1504 aa38.8■■■■□ 3.8
RBM39-205ENST00000397370 CCDC180Q9P1Z9 1646 aa34.41■■■■□ 3.1
RBM39-205ENST00000397370 ABCC9O60706 1549 aa33.43■■■□□ 2.94
RBM39-205ENST00000397370 ZCCHC6Q5VYS8 1495 aaKnown RBP32.37■■■□□ 2.77
RBM39-205ENST00000397370 DCAF8L2P0C7V8 631 aa32.31■■■□□ 2.76
RBM39-205ENST00000397370 NACADO15069 1562 aa32.28■■■□□ 2.76
RBM39-205ENST00000397370 RB1CC1Q8TDY2 1594 aa32.26■■■□□ 2.75
RBM39-205ENST00000397370 MYO15BQ96JP2 1530 aa32.16■■■□□ 2.74
RBM39-205ENST00000397370 DCAF1Q9Y4B6 1507 aa32.11■■■□□ 2.73
RBM39-205ENST00000397370 UNC13AQ9UPW8 1703 aa31.6■■■□□ 2.65
RBM39-205ENST00000397370 SCRIBQ14160 1630 aa31.41■■■□□ 2.62
RBM39-205ENST00000397370 BICRAQ9NZM4 1560 aa31.3■■■□□ 2.6
RBM39-205ENST00000397370 PABPN1Q86U42 306 aaKnown RBP eCLIP31.27■■■□□ 2.6
RBM39-205ENST00000397370 SHROOM4Q9ULL8 1493 aa30.95■■■□□ 2.55
RBM39-205ENST00000397370 DNAJC5BQ9UF47 199 aa30.47■■■□□ 2.47
RBM39-205ENST00000397370 EIF4G1Q04637 1599 aaKnown RBP30.44■■■□□ 2.46
RBM39-205ENST00000397370 CC2D2AQ9P2K1 1620 aa30.26■■■□□ 2.44
RBM39-205ENST00000397370 CECR2Q9BXF3 1484 aa30.2■■■□□ 2.43
RBM39-205ENST00000397370 SMARCA4P51532 1647 aa30.07■■■□□ 2.4
RBM39-205ENST00000397370 BAZ1AQ9NRL2 1556 aaPredicted RBP30.06■■■□□ 2.4
RBM39-205ENST00000397370 MROH2BQ7Z745 1585 aa29.91■■■□□ 2.38
RBM39-205ENST00000397370 ATAD2BQ9ULI0 1458 aa29.83■■■□□ 2.37
RBM39-205ENST00000397370 SMARCA2P51531 1590 aa29.81■■■□□ 2.36
RBM39-205ENST00000397370 NCAPD3P42695 1498 aa29.78■■■□□ 2.36
RBM39-205ENST00000397370 PEG3Q9GZU2 1588 aa29.77■■■□□ 2.36
RBM39-205ENST00000397370 HMGXB3Q12766 1538 aa29.66■■■□□ 2.34
RBM39-205ENST00000397370 RSF1Q96T23 1441 aaPredicted RBP29.65■■■□□ 2.34
RBM39-205ENST00000397370 WIZO95785 1651 aa29.63■■■□□ 2.33
RBM39-205ENST00000397370 BAZ1BQ9UIG0 1483 aaKnown RBP29.6■■■□□ 2.33
RBM39-205ENST00000397370 TOP2AP11388 1531 aaKnown RBP29.3■■■□□ 2.28
RBM39-205ENST00000397370 SUPT5HO00267 1087 aaKnown RBP29.07■■■□□ 2.24
RBM39-205ENST00000397370 NESP48681 1621 aa29.01■■■□□ 2.23
RBM39-205ENST00000397370 LAMC3Q9Y6N6 1575 aa28.97■■■□□ 2.23
RBM39-205ENST00000397370 CCDC88BA6NC98 1476 aa28.95■■■□□ 2.22
RBM39-205ENST00000397370 CADPSQ9ULU8 1353 aa28.92■■■□□ 2.22
RBM39-205ENST00000397370 CFTRP13569 1480 aa28.8■■■□□ 2.2
RBM39-205ENST00000397370 ERCC6Q03468 1493 aa28.78■■■□□ 2.2
RBM39-205ENST00000397370 PDS5BQ9NTI5 1447 aa28.75■■■□□ 2.19
RBM39-205ENST00000397370 KIF21AQ7Z4S6 1674 aa28.7■■■□□ 2.18
RBM39-205ENST00000397370 PRDM2Q13029 1718 aa28.66■■■□□ 2.18
RBM39-205ENST00000397370 FANCD2Q9BXW9 1451 aa28.59■■■□□ 2.17
RBM39-205ENST00000397370 CEP164Q9UPV0 1460 aa28.53■■■□□ 2.16
RBM39-205ENST00000397370 THOC2Q8NI27 1593 aaKnown RBP28.52■■■□□ 2.16
RBM39-205ENST00000397370 MRC2Q9UBG0 1479 aa28.45■■■□□ 2.14
RBM39-205ENST00000397370 CUX2O14529 1486 aa28.4■■■□□ 2.14
RBM39-205ENST00000397370 WDR62O43379 1518 aa28.35■■■□□ 2.13
RBM39-205ENST00000397370 URB2Q14146 1524 aaKnown RBP28.3■■■□□ 2.12
RBM39-205ENST00000397370 ABCC8Q09428 1581 aa28.18■■■□□ 2.1
RBM39-205ENST00000397370 TOPBP1Q92547 1522 aa28.17■■■□□ 2.1
RBM39-205ENST00000397370 DNMBPQ6XZF7 1577 aa28.16■■■□□ 2.1
RBM39-205ENST00000397370 CUX1P39880 1505 aa28.06■■■□□ 2.08
RBM39-205ENST00000397370 WRNQ14191 1432 aaPredicted RBP eCLIP27.94■■■□□ 2.06
RBM39-205ENST00000397370 POLA1P09884 1462 aaPredicted RBP27.94■■■□□ 2.06
RBM39-205ENST00000397370 IFT140Q96RY7 1462 aa27.92■■■□□ 2.06
RBM39-205ENST00000397370 FGD5Q6ZNL6 1462 aa27.91■■■□□ 2.06
RBM39-205ENST00000397370 SYNJ1O43426 1573 aa27.88■■■□□ 2.05
RBM39-205ENST00000397370 TOP2BQ02880 1626 aa27.88■■■□□ 2.05
RBM39-205ENST00000397370 BIVM-ERCC5R4GMW8 1640 aa27.88■■■□□ 2.05
RBM39-205ENST00000397370 TARBP1Q13395 1621 aaKnown RBP27.85■■■□□ 2.05
RBM39-205ENST00000397370 SOGA1O94964 1423 aa27.83■■■□□ 2.05
RBM39-205ENST00000397370 RAD54L2Q9Y4B4 1467 aa27.83■■■□□ 2.04
RBM39-205ENST00000397370 ZNF608Q9ULD9 1512 aaPredicted RBP27.78■■■□□ 2.04
RBM39-205ENST00000397370 WDR97A6NE52 1622 aa27.7■■■□□ 2.02
RBM39-205ENST00000397370 EIF4G3O43432 1585 aaKnown RBP27.69■■■□□ 2.02
RBM39-205ENST00000397370 AQRO60306 1485 aaKnown RBP eCLIP27.65■■■□□ 2.023e-11■■■■□ 23.7
RBM39-205ENST00000397370 ABCA10Q8WWZ4 1543 aa27.65■■■□□ 2.02
RBM39-205ENST00000397370 TDRD9Q8NDG6 1382 aaKnown RBP27.64■■■□□ 2.02
RBM39-205ENST00000397370 ABCA5Q8WWZ7 1642 aa27.53■■■□□ 2
RBM39-205ENST00000397370 GAPVD1Q14C86 1478 aa27.52■■■□□ 2
RBM39-205ENST00000397370 PBRM1Q86U86 1689 aa27.48■■□□□ 1.99
RBM39-205ENST00000397370 GRIN2BQ13224 1484 aa27.47■■□□□ 1.99
RBM39-205ENST00000397370 TRIM41Q8WV44 630 aa27.44■■□□□ 1.98
RBM39-205ENST00000397370 SNAPC4Q5SXM2 1469 aa27.41■■□□□ 1.98
RBM39-205ENST00000397370 MAGI1Q96QZ7 1491 aaPredicted RBP27.38■■□□□ 1.97
RBM39-205ENST00000397370 KIF27Q86VH2 1401 aa27.34■■□□□ 1.97
RBM39-205ENST00000397370 CHD1O14646 1710 aa27.33■■□□□ 1.97
RBM39-205ENST00000397370 ERICH3Q5RHP9 1530 aa27.33■■□□□ 1.97
RBM39-205ENST00000397370 SYNJ2O15056 1496 aa27.27■■□□□ 1.96
RBM39-205ENST00000397370 FBLN2P98095 1184 aa27.27■■□□□ 1.96
RBM39-205ENST00000397370 CHIC1Q5VXU3 224 aa27.27■■□□□ 1.96
RBM39-205ENST00000397370 OSCARQ8IYS5 282 aa27.27■■□□□ 1.96
RBM39-205ENST00000397370 DNAJC5Q9H3Z4 198 aa27.26■■□□□ 1.95
RBM39-205ENST00000397370 ADAMTS12P58397 1594 aa27.26■■□□□ 1.95
RBM39-205ENST00000397370 CHMP7Q8WUX9 453 aaPredicted RBP27.23■■□□□ 1.95
RBM39-205ENST00000397370 IGF1RP08069 1367 aa27.21■■□□□ 1.95
RBM39-205ENST00000397370 FHAD1B1AJZ9 1412 aa27.2■■□□□ 1.94
RBM39-205ENST00000397370 RUSC2Q8N2Y8 1516 aa27.19■■□□□ 1.94
RBM39-205ENST00000397370 CUL7Q14999 1698 aa27.14■■□□□ 1.93
RBM39-205ENST00000397370 GRIN2AQ12879 1464 aa27.13■■□□□ 1.93
RBM39-205ENST00000397370 CARMIL1Q5VZK9 1371 aa27.05■■□□□ 1.92
RBM39-205ENST00000397370 CLASP1Q7Z460 1538 aa27.01■■□□□ 1.91
RBM39-205ENST00000397370 CEP170Q5SW79 1584 aa27■■□□□ 1.91
RBM39-205ENST00000397370 NUP160Q12769 1436 aa26.99■■□□□ 1.91
RBM39-205ENST00000397370 EEA1Q15075 1411 aa26.98■■□□□ 1.91
RBM39-205ENST00000397370 RAPGEF2Q9Y4G8 1499 aa26.92■■□□□ 1.9
RBM39-205ENST00000397370 CSRNP3Q8WYN3 585 aa26.91■■□□□ 1.9
RBM39-205ENST00000397370 PRXQ9BXM0 1461 aa26.88■■□□□ 1.89
RBM39-205ENST00000397370 FAM9AQ8IZU1 332 aaPredicted RBP26.87■■□□□ 1.89
RBM39-205ENST00000397370 ARHGEF11O15085 1522 aa26.83■■□□□ 1.89
RBM39-205ENST00000397370 RIMBP3CA6NJZ7 1639 aa26.83■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms