RNA–Protein interactions for RNA: ENST00000475892.5

SUPT20H-212, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 1 (best) BASIC

Gene SUPT20H, Length 2,836 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-212ENST00000475892 NISCHQ9Y2I1 1504 aa34.23■■■■□ 3.07
SUPT20H-212ENST00000475892 CCDC180Q9P1Z9 1646 aa29.9■■■□□ 2.38
SUPT20H-212ENST00000475892 ZCCHC6Q5VYS8 1495 aaKnown RBP28.85■■■□□ 2.21
SUPT20H-212ENST00000475892 DCAF1Q9Y4B6 1507 aa28.5■■■□□ 2.15
SUPT20H-212ENST00000475892 MYO15BQ96JP2 1530 aa28.1■■■□□ 2.09
SUPT20H-212ENST00000475892 DCAF8L2P0C7V8 631 aa27.73■■■□□ 2.03
SUPT20H-212ENST00000475892 SHROOM4Q9ULL8 1493 aa27.72■■■□□ 2.03
SUPT20H-212ENST00000475892 NACADO15069 1562 aa27.72■■■□□ 2.03
SUPT20H-212ENST00000475892 ABCC9O60706 1549 aa27.63■■■□□ 2.01
SUPT20H-212ENST00000475892 RB1CC1Q8TDY2 1594 aa27.36■■□□□ 1.97
SUPT20H-212ENST00000475892 SCRIBQ14160 1630 aa27.25■■□□□ 1.95
SUPT20H-212ENST00000475892 SUPT5HO00267 1087 aaKnown RBP26.82■■□□□ 1.88
SUPT20H-212ENST00000475892 UNC13AQ9UPW8 1703 aa26.78■■□□□ 1.88
SUPT20H-212ENST00000475892 RSF1Q96T23 1441 aaPredicted RBP26.59■■□□□ 1.85
SUPT20H-212ENST00000475892 BICRAQ9NZM4 1560 aa26.47■■□□□ 1.83
SUPT20H-212ENST00000475892 BAZ1AQ9NRL2 1556 aaPredicted RBP26.45■■□□□ 1.83
SUPT20H-212ENST00000475892 CECR2Q9BXF3 1484 aa26.42■■□□□ 1.82
SUPT20H-212ENST00000475892 MROH2BQ7Z745 1585 aa26.36■■□□□ 1.81
SUPT20H-212ENST00000475892 SMARCA4P51532 1647 aa26.27■■□□□ 1.8
SUPT20H-212ENST00000475892 WIZO95785 1651 aa26.16■■□□□ 1.78
SUPT20H-212ENST00000475892 PEG3Q9GZU2 1588 aa26.06■■□□□ 1.76
SUPT20H-212ENST00000475892 TOP2AP11388 1531 aaKnown RBP26.03■■□□□ 1.76
SUPT20H-212ENST00000475892 CHIC1Q5VXU3 224 aa25.99■■□□□ 1.75
SUPT20H-212ENST00000475892 PABPN1Q86U42 306 aaKnown RBP eCLIP25.99■■□□□ 1.75
SUPT20H-212ENST00000475892 SMARCA2P51531 1590 aa25.81■■□□□ 1.72
SUPT20H-212ENST00000475892 EIF4G1Q04637 1599 aaKnown RBP25.73■■□□□ 1.71
SUPT20H-212ENST00000475892 ATAD2BQ9ULI0 1458 aa25.72■■□□□ 1.71
SUPT20H-212ENST00000475892 CCDC88BA6NC98 1476 aa25.66■■□□□ 1.7
SUPT20H-212ENST00000475892 HMGXB3Q12766 1538 aa25.58■■□□□ 1.68
SUPT20H-212ENST00000475892 BAZ1BQ9UIG0 1483 aaKnown RBP25.57■■□□□ 1.68
SUPT20H-212ENST00000475892 NCAPD3P42695 1498 aa25.52■■□□□ 1.68
SUPT20H-212ENST00000475892 TRIM41Q8WV44 630 aa25.34■■□□□ 1.65
SUPT20H-212ENST00000475892 CC2D2AQ9P2K1 1620 aa25.16■■□□□ 1.62
SUPT20H-212ENST00000475892 ABCC8Q09428 1581 aa25.11■■□□□ 1.61
SUPT20H-212ENST00000475892 PRDM2Q13029 1718 aa25.05■■□□□ 1.6
SUPT20H-212ENST00000475892 WRNQ14191 1432 aaPredicted RBP eCLIP25.02■■□□□ 1.6
SUPT20H-212ENST00000475892 CFTRP13569 1480 aa25■■□□□ 1.59
SUPT20H-212ENST00000475892 EEA1Q15075 1411 aa24.98■■□□□ 1.59
SUPT20H-212ENST00000475892 BIVM-ERCC5R4GMW8 1640 aa24.91■■□□□ 1.58
SUPT20H-212ENST00000475892 SYNJ1O43426 1573 aa24.91■■□□□ 1.58
SUPT20H-212ENST00000475892 TOP2BQ02880 1626 aa24.89■■□□□ 1.58
SUPT20H-212ENST00000475892 LOC105371045A0A1W2PR82 267 aa24.83■■□□□ 1.57
SUPT20H-212ENST00000475892 CADPSQ9ULU8 1353 aa24.81■■□□□ 1.56
SUPT20H-212ENST00000475892 SOGA1O94964 1423 aa24.69■■□□□ 1.54
SUPT20H-212ENST00000475892 FAM9AQ8IZU1 332 aaPredicted RBP24.67■■□□□ 1.54
SUPT20H-212ENST00000475892 CUX1P39880 1505 aa24.66■■□□□ 1.54
SUPT20H-212ENST00000475892 LAMC3Q9Y6N6 1575 aa24.64■■□□□ 1.54
SUPT20H-212ENST00000475892 KIF21BO75037 1637 aa24.61■■□□□ 1.53
SUPT20H-212ENST00000475892 CSRNP3Q8WYN3 585 aa24.58■■□□□ 1.53
SUPT20H-212ENST00000475892 RUSC2Q8N2Y8 1516 aa24.55■■□□□ 1.52
SUPT20H-212ENST00000475892 GOLGA3Q08378 1498 aa24.54■■□□□ 1.52
SUPT20H-212ENST00000475892 CEP164Q9UPV0 1460 aa24.53■■□□□ 1.52
SUPT20H-212ENST00000475892 FANCD2Q9BXW9 1451 aa24.52■■□□□ 1.52
SUPT20H-212ENST00000475892 TNIKQ9UKE5 1360 aa24.51■■□□□ 1.51
SUPT20H-212ENST00000475892 DNMBPQ6XZF7 1577 aa24.45■■□□□ 1.5
SUPT20H-212ENST00000475892 ERICH3Q5RHP9 1530 aa24.41■■□□□ 1.5
SUPT20H-212ENST00000475892 KIF27Q86VH2 1401 aa24.4■■□□□ 1.5
SUPT20H-212ENST00000475892 PDS5BQ9NTI5 1447 aa24.36■■□□□ 1.49
SUPT20H-212ENST00000475892 NESP48681 1621 aa24.35■■□□□ 1.49
SUPT20H-212ENST00000475892 PRXQ9BXM0 1461 aa24.33■■□□□ 1.49
SUPT20H-212ENST00000475892 FGD5Q6ZNL6 1462 aa24.33■■□□□ 1.49
SUPT20H-212ENST00000475892 CEP162Q5TB80 1403 aa24.31■■□□□ 1.48
SUPT20H-212ENST00000475892 TOPBP1Q92547 1522 aa24.31■■□□□ 1.48
SUPT20H-212ENST00000475892 ABCA10Q8WWZ4 1543 aa24.23■■□□□ 1.47
SUPT20H-212ENST00000475892 RAPGEF2Q9Y4G8 1499 aa24.22■■□□□ 1.47
SUPT20H-212ENST00000475892 KIF21AQ7Z4S6 1674 aa24.2■■□□□ 1.46
SUPT20H-212ENST00000475892 CUX2O14529 1486 aa24.19■■□□□ 1.46
SUPT20H-212ENST00000475892 URB2Q14146 1524 aaKnown RBP24.19■■□□□ 1.46
SUPT20H-212ENST00000475892 POLA1P09884 1462 aaPredicted RBP24.18■■□□□ 1.46
SUPT20H-212ENST00000475892 WDR97A6NE52 1622 aa24.18■■□□□ 1.46
SUPT20H-212ENST00000475892 UBTFP17480 764 aaKnown RBP24.17■■□□□ 1.46
SUPT20H-212ENST00000475892 TRIM26Q12899 539 aaPredicted RBP24.15■■□□□ 1.46
SUPT20H-212ENST00000475892 EHMT2Q96KQ7 1210 aa24.15■■□□□ 1.46
SUPT20H-212ENST00000475892 DNAJC5BQ9UF47 199 aa24.1■■□□□ 1.45
SUPT20H-212ENST00000475892 IGF1RP08069 1367 aa24.09■■□□□ 1.45
SUPT20H-212ENST00000475892 CUL7Q14999 1698 aa24.07■■□□□ 1.44
SUPT20H-212ENST00000475892 CLIP1P30622 1438 aa24.07■■□□□ 1.44
SUPT20H-212ENST00000475892 MRC2Q9UBG0 1479 aa24.04■■□□□ 1.44
SUPT20H-212ENST00000475892 ABCA5Q8WWZ7 1642 aa24.02■■□□□ 1.44
SUPT20H-212ENST00000475892 PCGF6Q9BYE7 350 aa24.01■■□□□ 1.43
SUPT20H-212ENST00000475892 RAD54L2Q9Y4B4 1467 aa24.01■■□□□ 1.43
SUPT20H-212ENST00000475892 CARMIL1Q5VZK9 1371 aa23.98■■□□□ 1.43
SUPT20H-212ENST00000475892 TARBP1Q13395 1621 aaKnown RBP23.97■■□□□ 1.43
SUPT20H-212ENST00000475892 VPS8Q8N3P4 1428 aa23.96■■□□□ 1.43
SUPT20H-212ENST00000475892 WDR62O43379 1518 aa23.96■■□□□ 1.43
SUPT20H-212ENST00000475892 GAPVD1Q14C86 1478 aa23.86■■□□□ 1.41
SUPT20H-212ENST00000475892 ARAP1Q96P48 1450 aa23.83■■□□□ 1.41
SUPT20H-212ENST00000475892 IFT140Q96RY7 1462 aa23.82■■□□□ 1.4
SUPT20H-212ENST00000475892 CTTNBP2Q8WZ74 1663 aa23.8■■□□□ 1.4
SUPT20H-212ENST00000475892 THOC2Q8NI27 1593 aaKnown RBP23.8■■□□□ 1.4
SUPT20H-212ENST00000475892 PBRM1Q86U86 1689 aa23.79■■□□□ 1.4
SUPT20H-212ENST00000475892 ARHGAP35Q9NRY4 1499 aa23.77■■□□□ 1.4
SUPT20H-212ENST00000475892 EFCAB5A4FU69 1503 aa23.75■■□□□ 1.39
SUPT20H-212ENST00000475892 ERCC6Q03468 1493 aa23.72■■□□□ 1.39
SUPT20H-212ENST00000475892 HRCP23327 699 aa23.72■■□□□ 1.39
SUPT20H-212ENST00000475892 TDRD9Q8NDG6 1382 aaKnown RBP23.7■■□□□ 1.38
SUPT20H-212ENST00000475892 GRIN2BQ13224 1484 aa23.67■■□□□ 1.38
SUPT20H-212ENST00000475892 ADAMTS12P58397 1594 aa23.67■■□□□ 1.38
SUPT20H-212ENST00000475892 MAP3K1Q13233 1512 aa23.66■■□□□ 1.38
SUPT20H-212ENST00000475892 FHAD1B1AJZ9 1412 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms