RNA–Protein interactions for RNA: ENST00000380843.8

IDH3B-201, Transcript of isocitrate dehydrogenase 3 (NAD(+)) beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene IDH3B, Length 1,545 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3B-201ENST00000380843 NISCHQ9Y2I1 1504 aa37.45■■■■□ 3.58
IDH3B-201ENST00000380843 CCDC180Q9P1Z9 1646 aa33.21■■■□□ 2.91
IDH3B-201ENST00000380843 ABCC9O60706 1549 aa33.02■■■□□ 2.88
IDH3B-201ENST00000380843 DCAF8L2P0C7V8 631 aa31.65■■■□□ 2.66
IDH3B-201ENST00000380843 RB1CC1Q8TDY2 1594 aa31.45■■■□□ 2.63
IDH3B-201ENST00000380843 NACADO15069 1562 aa31.34■■■□□ 2.61
IDH3B-201ENST00000380843 ZCCHC6Q5VYS8 1495 aaKnown RBP31.22■■■□□ 2.59
IDH3B-201ENST00000380843 MYO15BQ96JP2 1530 aa30.99■■■□□ 2.55
IDH3B-201ENST00000380843 PABPN1Q86U42 306 aaKnown RBP eCLIP30.93■■■□□ 2.54
IDH3B-201ENST00000380843 DCAF1Q9Y4B6 1507 aa30.9■■■□□ 2.54
IDH3B-201ENST00000380843 UNC13AQ9UPW8 1703 aa30.81■■■□□ 2.52
IDH3B-201ENST00000380843 DNAJC5BQ9UF47 199 aa30.66■■■□□ 2.5
IDH3B-201ENST00000380843 BICRAQ9NZM4 1560 aa30.62■■■□□ 2.49
IDH3B-201ENST00000380843 SCRIBQ14160 1630 aa30.52■■■□□ 2.48
IDH3B-201ENST00000380843 SHROOM4Q9ULL8 1493 aa30■■■□□ 2.39
IDH3B-201ENST00000380843 EIF4G1Q04637 1599 aaKnown RBP29.79■■■□□ 2.36
IDH3B-201ENST00000380843 CC2D2AQ9P2K1 1620 aa29.76■■■□□ 2.35
IDH3B-201ENST00000380843 CECR2Q9BXF3 1484 aa29.62■■■□□ 2.33
IDH3B-201ENST00000380843 SMARCA4P51532 1647 aa29.07■■■□□ 2.24
IDH3B-201ENST00000380843 ATAD2BQ9ULI0 1458 aa29.02■■■□□ 2.24
IDH3B-201ENST00000380843 NCAPD3P42695 1498 aa28.99■■■□□ 2.23
IDH3B-201ENST00000380843 BAZ1AQ9NRL2 1556 aaPredicted RBP28.97■■■□□ 2.23
IDH3B-201ENST00000380843 MROH2BQ7Z745 1585 aa28.94■■■□□ 2.22
IDH3B-201ENST00000380843 SMARCA2P51531 1590 aa28.87■■■□□ 2.21
IDH3B-201ENST00000380843 HMGXB3Q12766 1538 aa28.75■■■□□ 2.19
IDH3B-201ENST00000380843 BAZ1BQ9UIG0 1483 aaKnown RBP28.75■■■□□ 2.19
IDH3B-201ENST00000380843 PEG3Q9GZU2 1588 aa28.71■■■□□ 2.19
IDH3B-201ENST00000380843 RSF1Q96T23 1441 aaPredicted RBP28.7■■■□□ 2.18
IDH3B-201ENST00000380843 DNAJC5Q9H3Z4 198 aa28.65■■■□□ 2.18
IDH3B-201ENST00000380843 WIZO95785 1651 aa28.61■■■□□ 2.17
IDH3B-201ENST00000380843 NESP48681 1621 aa28.54■■■□□ 2.16
IDH3B-201ENST00000380843 SUPT5HO00267 1087 aaKnown RBP28.48■■■□□ 2.15
IDH3B-201ENST00000380843 ERCC6Q03468 1493 aa28.39■■■□□ 2.13
IDH3B-201ENST00000380843 TOP2AP11388 1531 aaKnown RBP28.23■■■□□ 2.11
IDH3B-201ENST00000380843 LAMC3Q9Y6N6 1575 aa28.2■■■□□ 2.1
IDH3B-201ENST00000380843 CADPSQ9ULU8 1353 aa28.18■■■□□ 2.1
IDH3B-201ENST00000380843 PDS5BQ9NTI5 1447 aa28.07■■■□□ 2.08
IDH3B-201ENST00000380843 KIF21AQ7Z4S6 1674 aa28.07■■■□□ 2.08
IDH3B-201ENST00000380843 CUX2O14529 1486 aa28.05■■■□□ 2.08
IDH3B-201ENST00000380843 THOC2Q8NI27 1593 aaKnown RBP27.98■■■□□ 2.07
IDH3B-201ENST00000380843 CCDC88BA6NC98 1476 aa27.96■■■□□ 2.07
IDH3B-201ENST00000380843 CFTRP13569 1480 aa27.93■■■□□ 2.06
IDH3B-201ENST00000380843 FANCD2Q9BXW9 1451 aa27.87■■■□□ 2.05
IDH3B-201ENST00000380843 MRC2Q9UBG0 1479 aa27.81■■■□□ 2.04
IDH3B-201ENST00000380843 CEP164Q9UPV0 1460 aa27.8■■■□□ 2.04
IDH3B-201ENST00000380843 WDR62O43379 1518 aa27.69■■■□□ 2.02
IDH3B-201ENST00000380843 URB2Q14146 1524 aaKnown RBP27.63■■■□□ 2.01
IDH3B-201ENST00000380843 PRDM2Q13029 1718 aa27.56■■■□□ 2
IDH3B-201ENST00000380843 TOPBP1Q92547 1522 aa27.39■■□□□ 1.97
IDH3B-201ENST00000380843 DNMBPQ6XZF7 1577 aa27.27■■□□□ 1.96
IDH3B-201ENST00000380843 ZNF608Q9ULD9 1512 aaPredicted RBP27.26■■□□□ 1.95
IDH3B-201ENST00000380843 ABCC8Q09428 1581 aa27.24■■□□□ 1.95
IDH3B-201ENST00000380843 IFT140Q96RY7 1462 aa27.21■■□□□ 1.95
IDH3B-201ENST00000380843 TRIM41Q8WV44 630 aa27.21■■□□□ 1.95
IDH3B-201ENST00000380843 POLA1P09884 1462 aaPredicted RBP27.15■■□□□ 1.94
IDH3B-201ENST00000380843 RAD54L2Q9Y4B4 1467 aa27.14■■□□□ 1.93
IDH3B-201ENST00000380843 CUX1P39880 1505 aa27.14■■□□□ 1.93
IDH3B-201ENST00000380843 AQRO60306 1485 aaKnown RBP eCLIP27.09■■□□□ 1.938e-7■■■■■ 26.8
IDH3B-201ENST00000380843 TARBP1Q13395 1621 aaKnown RBP27.09■■□□□ 1.93
IDH3B-201ENST00000380843 FGD5Q6ZNL6 1462 aa27.07■■□□□ 1.92
IDH3B-201ENST00000380843 SOGA1O94964 1423 aa27.06■■□□□ 1.92
IDH3B-201ENST00000380843 WRNQ14191 1432 aaPredicted RBP eCLIP27.03■■□□□ 1.92
IDH3B-201ENST00000380843 TDRD9Q8NDG6 1382 aaKnown RBP27.03■■□□□ 1.92
IDH3B-201ENST00000380843 EIF4G3O43432 1585 aaKnown RBP27.02■■□□□ 1.92
IDH3B-201ENST00000380843 OSCARQ8IYS5 282 aa27■■□□□ 1.91
IDH3B-201ENST00000380843 SYNJ1O43426 1573 aa26.93■■□□□ 1.9
IDH3B-201ENST00000380843 CHIC1Q5VXU3 224 aa26.9■■□□□ 1.9
IDH3B-201ENST00000380843 TOP2BQ02880 1626 aa26.9■■□□□ 1.9
IDH3B-201ENST00000380843 BIVM-ERCC5R4GMW8 1640 aa26.89■■□□□ 1.9
IDH3B-201ENST00000380843 FBLN2P98095 1184 aa26.87■■□□□ 1.89
IDH3B-201ENST00000380843 SNAPC4Q5SXM2 1469 aa26.76■■□□□ 1.87
IDH3B-201ENST00000380843 WDR97A6NE52 1622 aa26.74■■□□□ 1.87
IDH3B-201ENST00000380843 CHD1O14646 1710 aa26.73■■□□□ 1.87
IDH3B-201ENST00000380843 ABCA10Q8WWZ4 1543 aa26.72■■□□□ 1.87
IDH3B-201ENST00000380843 GAPVD1Q14C86 1478 aa26.71■■□□□ 1.87
IDH3B-201ENST00000380843 GRIN2BQ13224 1484 aa26.7■■□□□ 1.87
IDH3B-201ENST00000380843 CHMP7Q8WUX9 453 aaPredicted RBP26.67■■□□□ 1.86
IDH3B-201ENST00000380843 ABCA5Q8WWZ7 1642 aa26.62■■□□□ 1.85
IDH3B-201ENST00000380843 MAGI1Q96QZ7 1491 aaPredicted RBP26.6■■□□□ 1.85
IDH3B-201ENST00000380843 PBRM1Q86U86 1689 aa26.6■■□□□ 1.85
IDH3B-201ENST00000380843 RIMBP3CA6NJZ7 1639 aa26.55■■□□□ 1.84
IDH3B-201ENST00000380843 RIMBP3BA6NNM3 1639 aa26.55■■□□□ 1.84
IDH3B-201ENST00000380843 RIMBP3Q9UFD9 1639 aa26.55■■□□□ 1.84
IDH3B-201ENST00000380843 SYNJ2O15056 1496 aa26.55■■□□□ 1.84
IDH3B-201ENST00000380843 ARHGEF11O15085 1522 aa26.52■■□□□ 1.84
IDH3B-201ENST00000380843 CYB5RLQ6IPT4 315 aa26.44■■□□□ 1.82
IDH3B-201ENST00000380843 KIF27Q86VH2 1401 aa26.42■■□□□ 1.82
IDH3B-201ENST00000380843 CLASP1Q7Z460 1538 aa26.42■■□□□ 1.82
IDH3B-201ENST00000380843 RUSC2Q8N2Y8 1516 aa26.4■■□□□ 1.82
IDH3B-201ENST00000380843 ADAMTS12P58397 1594 aa26.4■■□□□ 1.82
IDH3B-201ENST00000380843 GRIN2AQ12879 1464 aa26.37■■□□□ 1.81
IDH3B-201ENST00000380843 FHAD1B1AJZ9 1412 aa26.36■■□□□ 1.81
IDH3B-201ENST00000380843 ERICH3Q5RHP9 1530 aa26.36■■□□□ 1.81
IDH3B-201ENST00000380843 ARAP1Q96P48 1450 aa26.33■■□□□ 1.81
IDH3B-201ENST00000380843 FAM9AQ8IZU1 332 aaPredicted RBP26.31■■□□□ 1.8
IDH3B-201ENST00000380843 EEA1Q15075 1411 aa26.29■■□□□ 1.8
IDH3B-201ENST00000380843 IGF1RP08069 1367 aa26.29■■□□□ 1.8
IDH3B-201ENST00000380843 CEP170Q5SW79 1584 aa26.29■■□□□ 1.8
IDH3B-201ENST00000380843 NUP160Q12769 1436 aa26.25■■□□□ 1.79
IDH3B-201ENST00000380843 CSRNP3Q8WYN3 585 aa26.23■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms