Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
NDUFA1O15239 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
NDUFA1O15239 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC10.51□□□□□ -0.73
NDUFA1O15239 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC10.51□□□□□ -0.73
NDUFA1O15239 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
NDUFA1O15239 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC10.51□□□□□ -0.73
NDUFA1O15239 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC10.51□□□□□ -0.73
NDUFA1O15239 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC10.51□□□□□ -0.73
NDUFA1O15239 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC10.51□□□□□ -0.73
NDUFA1O15239 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
NDUFA1O15239 AC015802.1-201ENST00000588104 1449 ntBASIC10.51□□□□□ -0.73
NDUFA1O15239 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
NDUFA1O15239 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
NDUFA1O15239 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
NDUFA1O15239 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
NDUFA1O15239 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC10.51□□□□□ -0.73
NDUFA1O15239 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
NDUFA1O15239 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
NDUFA1O15239 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
NDUFA1O15239 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC10.51□□□□□ -0.73
NDUFA1O15239 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC10.51□□□□□ -0.73
NDUFA1O15239 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
NDUFA1O15239 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC10.51□□□□□ -0.73
NDUFA1O15239 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
NDUFA1O15239 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
NDUFA1O15239 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
NDUFA1O15239 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
NDUFA1O15239 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
NDUFA1O15239 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
NDUFA1O15239 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
NDUFA1O15239 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC10.51□□□□□ -0.73
NDUFA1O15239 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
NDUFA1O15239 HLA-H-201ENST00000383620 1096 ntBASIC10.51□□□□□ -0.73
NDUFA1O15239 AL355306.1-201ENST00000415580 579 ntBASIC10.51□□□□□ -0.73
NDUFA1O15239 AL590627.1-203ENST00000421194 1026 ntBASIC10.51□□□□□ -0.73
NDUFA1O15239 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
NDUFA1O15239 SPDYE11-202ENST00000450699 704 ntBASIC10.51□□□□□ -0.73
NDUFA1O15239 KRT18P3-201ENST00000451602 1288 ntBASIC10.51□□□□□ -0.73
NDUFA1O15239 AL139010.1-201ENST00000454878 894 ntBASIC10.51□□□□□ -0.73
NDUFA1O15239 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC10.51□□□□□ -0.73
NDUFA1O15239 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC10.51□□□□□ -0.73
NDUFA1O15239 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
NDUFA1O15239 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
NDUFA1O15239 SPDYE9P-201ENST00000570642 692 ntBASIC10.51□□□□□ -0.73
NDUFA1O15239 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC10.51□□□□□ -0.73
NDUFA1O15239 NKG7-205ENST00000600427 520 ntTSL 3 BASIC10.51□□□□□ -0.73
NDUFA1O15239 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC10.51□□□□□ -0.73
NDUFA1O15239 SPDYE10P-202ENST00000612005 668 ntBASIC10.51□□□□□ -0.73
NDUFA1O15239 SPDYE8P-202ENST00000612377 668 ntBASIC10.51□□□□□ -0.73
NDUFA1O15239 AL513190.1-201ENST00000621254 727 ntBASIC10.51□□□□□ -0.73
NDUFA1O15239 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC10.51□□□□□ -0.73
NDUFA1O15239 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
NDUFA1O15239 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
NDUFA1O15239 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
NDUFA1O15239 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC10.51□□□□□ -0.73
NDUFA1O15239 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
NDUFA1O15239 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
NDUFA1O15239 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
NDUFA1O15239 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
NDUFA1O15239 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC10.51□□□□□ -0.73
NDUFA1O15239 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC10.51□□□□□ -0.73
NDUFA1O15239 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
NDUFA1O15239 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
NDUFA1O15239 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
NDUFA1O15239 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
NDUFA1O15239 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
NDUFA1O15239 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
NDUFA1O15239 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC10.51□□□□□ -0.73
NDUFA1O15239 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
NDUFA1O15239 AC011474.4-201ENST00000623523 2076 ntBASIC10.51□□□□□ -0.73
NDUFA1O15239 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
NDUFA1O15239 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC10.51□□□□□ -0.73
NDUFA1O15239 NIN-202ENST00000324330 4364 ntTSL 5 BASIC10.51□□□□□ -0.73
NDUFA1O15239 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
NDUFA1O15239 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC10.51□□□□□ -0.73
NDUFA1O15239 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC10.51□□□□□ -0.73
NDUFA1O15239 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC10.51□□□□□ -0.73
NDUFA1O15239 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
NDUFA1O15239 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
NDUFA1O15239 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC10.5□□□□□ -0.73
NDUFA1O15239 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC10.5□□□□□ -0.73
NDUFA1O15239 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
NDUFA1O15239 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
NDUFA1O15239 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC10.5□□□□□ -0.73
NDUFA1O15239 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
NDUFA1O15239 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC10.5□□□□□ -0.73
NDUFA1O15239 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
NDUFA1O15239 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
NDUFA1O15239 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
NDUFA1O15239 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
NDUFA1O15239 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC10.5□□□□□ -0.73
NDUFA1O15239 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
NDUFA1O15239 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC10.5□□□□□ -0.73
NDUFA1O15239 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
NDUFA1O15239 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
NDUFA1O15239 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC10.5□□□□□ -0.73
NDUFA1O15239 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
NDUFA1O15239 APP-205ENST00000358918 2366 ntTSL 5 BASIC10.5□□□□□ -0.73
NDUFA1O15239 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC10.5□□□□□ -0.73
NDUFA1O15239 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms