RNA–Protein interactions for RNA: ENST00000354323.2

HRCT1-201, Transcript of histidine rich carboxyl terminus 1, humanhuman

APPRIS P1 BASIC

Gene HRCT1, Length 950 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HRCT1-201ENST00000354323 NISCHQ9Y2I1 1504 aa38.04■■■■□ 3.68
HRCT1-201ENST00000354323 CCDC180Q9P1Z9 1646 aa33.61■■■□□ 2.97
HRCT1-201ENST00000354323 ABCC9O60706 1549 aa32.21■■■□□ 2.75
HRCT1-201ENST00000354323 ZCCHC6Q5VYS8 1495 aaKnown RBP31.84■■■□□ 2.69
HRCT1-201ENST00000354323 DCAF1Q9Y4B6 1507 aa31.51■■■□□ 2.63
HRCT1-201ENST00000354323 DCAF8L2P0C7V8 631 aa31.46■■■□□ 2.63
HRCT1-201ENST00000354323 MYO15BQ96JP2 1530 aa31.41■■■□□ 2.62
HRCT1-201ENST00000354323 NACADO15069 1562 aa31.4■■■□□ 2.62
HRCT1-201ENST00000354323 RB1CC1Q8TDY2 1594 aa31.3■■■□□ 2.6
HRCT1-201ENST00000354323 SCRIBQ14160 1630 aa30.69■■■□□ 2.5
HRCT1-201ENST00000354323 UNC13AQ9UPW8 1703 aa30.64■■■□□ 2.5
HRCT1-201ENST00000354323 SHROOM4Q9ULL8 1493 aa30.42■■■□□ 2.46
HRCT1-201ENST00000354323 BICRAQ9NZM4 1560 aa30.32■■■□□ 2.44
HRCT1-201ENST00000354323 PABPN1Q86U42 306 aaKnown RBP eCLIP30.16■■■□□ 2.42
HRCT1-201ENST00000354323 CECR2Q9BXF3 1484 aa29.55■■■□□ 2.32
HRCT1-201ENST00000354323 EIF4G1Q04637 1599 aaKnown RBP29.46■■■□□ 2.31
HRCT1-201ENST00000354323 BAZ1AQ9NRL2 1556 aaPredicted RBP29.46■■■□□ 2.31
HRCT1-201ENST00000354323 SMARCA4P51532 1647 aa29.42■■■□□ 2.3
HRCT1-201ENST00000354323 MROH2BQ7Z745 1585 aa29.33■■■□□ 2.29
HRCT1-201ENST00000354323 CC2D2AQ9P2K1 1620 aa29.2■■■□□ 2.26
HRCT1-201ENST00000354323 RSF1Q96T23 1441 aaPredicted RBP29.2■■■□□ 2.26
HRCT1-201ENST00000354323 PEG3Q9GZU2 1588 aa29.1■■■□□ 2.25
HRCT1-201ENST00000354323 SMARCA2P51531 1590 aa29.08■■■□□ 2.25
HRCT1-201ENST00000354323 WIZO95785 1651 aa29.08■■■□□ 2.25
HRCT1-201ENST00000354323 ATAD2BQ9ULI0 1458 aa29.05■■■□□ 2.24
HRCT1-201ENST00000354323 NCAPD3P42695 1498 aa28.93■■■□□ 2.22
HRCT1-201ENST00000354323 SUPT5HO00267 1087 aaKnown RBP28.92■■■□□ 2.22
HRCT1-201ENST00000354323 DNAJC5BQ9UF47 199 aa28.91■■■□□ 2.22
HRCT1-201ENST00000354323 HMGXB3Q12766 1538 aa28.89■■■□□ 2.22
HRCT1-201ENST00000354323 BAZ1BQ9UIG0 1483 aaKnown RBP28.87■■■□□ 2.21
HRCT1-201ENST00000354323 TOP2AP11388 1531 aaKnown RBP28.8■■■□□ 2.2
HRCT1-201ENST00000354323 CCDC88BA6NC98 1476 aa28.42■■■□□ 2.14
HRCT1-201ENST00000354323 CADPSQ9ULU8 1353 aa28.11■■■□□ 2.09
HRCT1-201ENST00000354323 LAMC3Q9Y6N6 1575 aa28.11■■■□□ 2.09
HRCT1-201ENST00000354323 CFTRP13569 1480 aa28.09■■■□□ 2.09
HRCT1-201ENST00000354323 NESP48681 1621 aa28.06■■■□□ 2.08
HRCT1-201ENST00000354323 PRDM2Q13029 1718 aa28.06■■■□□ 2.08
HRCT1-201ENST00000354323 PDS5BQ9NTI5 1447 aa27.86■■■□□ 2.05
HRCT1-201ENST00000354323 FANCD2Q9BXW9 1451 aa27.82■■■□□ 2.04
HRCT1-201ENST00000354323 KIF21AQ7Z4S6 1674 aa27.81■■■□□ 2.04
HRCT1-201ENST00000354323 CEP164Q9UPV0 1460 aa27.74■■■□□ 2.03
HRCT1-201ENST00000354323 ERCC6Q03468 1493 aa27.72■■■□□ 2.03
HRCT1-201ENST00000354323 ABCC8Q09428 1581 aa27.6■■■□□ 2.01
HRCT1-201ENST00000354323 MRC2Q9UBG0 1479 aa27.57■■■□□ 2
HRCT1-201ENST00000354323 THOC2Q8NI27 1593 aaKnown RBP27.54■■■□□ 2
HRCT1-201ENST00000354323 WRNQ14191 1432 aaPredicted RBP eCLIP27.53■■■□□ 2
HRCT1-201ENST00000354323 URB2Q14146 1524 aaKnown RBP27.51■■□□□ 1.99
HRCT1-201ENST00000354323 DNMBPQ6XZF7 1577 aa27.5■■□□□ 1.99
HRCT1-201ENST00000354323 CUX1P39880 1505 aa27.49■■□□□ 1.99
HRCT1-201ENST00000354323 WDR62O43379 1518 aa27.46■■□□□ 1.99
HRCT1-201ENST00000354323 SYNJ1O43426 1573 aa27.46■■□□□ 1.99
HRCT1-201ENST00000354323 TOPBP1Q92547 1522 aa27.46■■□□□ 1.99
HRCT1-201ENST00000354323 BIVM-ERCC5R4GMW8 1640 aa27.45■■□□□ 1.99
HRCT1-201ENST00000354323 TOP2BQ02880 1626 aa27.44■■□□□ 1.98
HRCT1-201ENST00000354323 CHIC1Q5VXU3 224 aa27.35■■□□□ 1.97
HRCT1-201ENST00000354323 FGD5Q6ZNL6 1462 aa27.29■■□□□ 1.96
HRCT1-201ENST00000354323 TRIM41Q8WV44 630 aa27.28■■□□□ 1.96
HRCT1-201ENST00000354323 POLA1P09884 1462 aaPredicted RBP27.26■■□□□ 1.95
HRCT1-201ENST00000354323 CUX2O14529 1486 aa27.19■■□□□ 1.94
HRCT1-201ENST00000354323 SOGA1O94964 1423 aa27.14■■□□□ 1.93
HRCT1-201ENST00000354323 TARBP1Q13395 1621 aaKnown RBP27.12■■□□□ 1.93
HRCT1-201ENST00000354323 IFT140Q96RY7 1462 aa27.12■■□□□ 1.93
HRCT1-201ENST00000354323 RAD54L2Q9Y4B4 1467 aa27.12■■□□□ 1.93
HRCT1-201ENST00000354323 WDR97A6NE52 1622 aa27.09■■□□□ 1.93
HRCT1-201ENST00000354323 ABCA10Q8WWZ4 1543 aa27.06■■□□□ 1.92
HRCT1-201ENST00000354323 ABCA5Q8WWZ7 1642 aa26.94■■□□□ 1.9
HRCT1-201ENST00000354323 ZNF608Q9ULD9 1512 aaPredicted RBP26.93■■□□□ 1.9
HRCT1-201ENST00000354323 EIF4G3O43432 1585 aaKnown RBP26.91■■□□□ 1.9
HRCT1-201ENST00000354323 KIF27Q86VH2 1401 aa26.9■■□□□ 1.9
HRCT1-201ENST00000354323 TDRD9Q8NDG6 1382 aaKnown RBP26.89■■□□□ 1.9
HRCT1-201ENST00000354323 AQRO60306 1485 aaKnown RBP eCLIP26.85■■□□□ 1.89
HRCT1-201ENST00000354323 GAPVD1Q14C86 1478 aa26.85■■□□□ 1.89
HRCT1-201ENST00000354323 RUSC2Q8N2Y8 1516 aa26.85■■□□□ 1.89
HRCT1-201ENST00000354323 PBRM1Q86U86 1689 aa26.83■■□□□ 1.89
HRCT1-201ENST00000354323 EEA1Q15075 1411 aa26.82■■□□□ 1.88
HRCT1-201ENST00000354323 GRIN2BQ13224 1484 aa26.76■■□□□ 1.87
HRCT1-201ENST00000354323 ERICH3Q5RHP9 1530 aa26.75■■□□□ 1.87
HRCT1-201ENST00000354323 FAM9AQ8IZU1 332 aaPredicted RBP26.7■■□□□ 1.86
HRCT1-201ENST00000354323 IGF1RP08069 1367 aa26.68■■□□□ 1.86
HRCT1-201ENST00000354323 CUL7Q14999 1698 aa26.67■■□□□ 1.86
HRCT1-201ENST00000354323 SNAPC4Q5SXM2 1469 aa26.65■■□□□ 1.86
HRCT1-201ENST00000354323 CSRNP3Q8WYN3 585 aa26.64■■□□□ 1.86
HRCT1-201ENST00000354323 MAGI1Q96QZ7 1491 aaPredicted RBP26.63■■□□□ 1.85
HRCT1-201ENST00000354323 ADAMTS12P58397 1594 aa26.63■■□□□ 1.85
HRCT1-201ENST00000354323 CARMIL1Q5VZK9 1371 aa26.56■■□□□ 1.84
HRCT1-201ENST00000354323 FHAD1B1AJZ9 1412 aa26.56■■□□□ 1.84
HRCT1-201ENST00000354323 PRXQ9BXM0 1461 aa26.55■■□□□ 1.84
HRCT1-201ENST00000354323 KIF21BO75037 1637 aa26.54■■□□□ 1.84
HRCT1-201ENST00000354323 SYNJ2O15056 1496 aa26.51■■□□□ 1.83
HRCT1-201ENST00000354323 RAPGEF2Q9Y4G8 1499 aa26.49■■□□□ 1.83
HRCT1-201ENST00000354323 CHD1O14646 1710 aa26.47■■□□□ 1.83
HRCT1-201ENST00000354323 GRIN2AQ12879 1464 aa26.42■■□□□ 1.82
HRCT1-201ENST00000354323 CHMP7Q8WUX9 453 aaPredicted RBP26.41■■□□□ 1.82
HRCT1-201ENST00000354323 GOLGA3Q08378 1498 aa26.4■■□□□ 1.82
HRCT1-201ENST00000354323 FBLN2P98095 1184 aa26.39■■□□□ 1.82
HRCT1-201ENST00000354323 EHMT2Q96KQ7 1210 aa26.31■■□□□ 1.8
HRCT1-201ENST00000354323 CTTNBP2Q8WZ74 1663 aa26.29■■□□□ 1.8
HRCT1-201ENST00000354323 CEP170Q5SW79 1584 aa26.29■■□□□ 1.8
HRCT1-201ENST00000354323 NUP160Q12769 1436 aa26.27■■□□□ 1.8
HRCT1-201ENST00000354323 LOC105371045A0A1W2PR82 267 aa26.22■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 129.2 ms