RNA–Protein interactions for RNA: ENST00000342234.3

SP6-201, Transcript of Sp6 transcription factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SP6, Length 3,800 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP6-201ENST00000342234 NISCHQ9Y2I1 1504 aa29.72■■■□□ 2.35
SP6-201ENST00000342234 DCAF8L2P0C7V8 631 aa26.94■■□□□ 1.9
SP6-201ENST00000342234 SHROOM4Q9ULL8 1493 aa26.52■■□□□ 1.84
SP6-201ENST00000342234 SUPT5HO00267 1087 aaKnown RBP26.13■■□□□ 1.77
SP6-201ENST00000342234 ZCCHC6Q5VYS8 1495 aaKnown RBP24.87■■□□□ 1.57
SP6-201ENST00000342234 CCDC180Q9P1Z9 1646 aa24.85■■□□□ 1.57
SP6-201ENST00000342234 ABCC9O60706 1549 aa24.67■■□□□ 1.54
SP6-201ENST00000342234 EHMT2Q96KQ7 1210 aa24.6■■□□□ 1.53
SP6-201ENST00000342234 CHIC1Q5VXU3 224 aa24.42■■□□□ 1.5
SP6-201ENST00000342234 FAM9AQ8IZU1 332 aaPredicted RBP24.38■■□□□ 1.49
SP6-201ENST00000342234 TRIM41Q8WV44 630 aa24.15■■□□□ 1.46
SP6-201ENST00000342234 SCRIBQ14160 1630 aa24.13■■□□□ 1.45
SP6-201ENST00000342234 LOC105371045A0A1W2PR82 267 aa24.09■■□□□ 1.45
SP6-201ENST00000342234 PCGF6Q9BYE7 350 aa24.02■■□□□ 1.44
SP6-201ENST00000342234 PABPN1Q86U42 306 aaKnown RBP eCLIP23.97■■□□□ 1.43
SP6-201ENST00000342234 DCAF1Q9Y4B6 1507 aa23.85■■□□□ 1.41
SP6-201ENST00000342234 TTBK1Q5TCY1 1321 aaPredicted RBP23.65■■□□□ 1.38
SP6-201ENST00000342234 MYO15BQ96JP2 1530 aa23.64■■□□□ 1.38
SP6-201ENST00000342234 RSF1Q96T23 1441 aaPredicted RBP23.61■■□□□ 1.37
SP6-201ENST00000342234 PPARGC1BQ86YN6 1023 aaKnown RBP23.57■■□□□ 1.36
SP6-201ENST00000342234 NACADO15069 1562 aa23.51■■□□□ 1.35
SP6-201ENST00000342234 CECR2Q9BXF3 1484 aa23.47■■□□□ 1.35
SP6-201ENST00000342234 RANGAP1P46060 587 aaPredicted RBP23.46■■□□□ 1.35
SP6-201ENST00000342234 RB1CC1Q8TDY2 1594 aa23.4■■□□□ 1.34
SP6-201ENST00000342234 UBTFP17480 764 aaKnown RBP23.37■■□□□ 1.33
SP6-201ENST00000342234 TRIM26Q12899 539 aaPredicted RBP23.22■■□□□ 1.31
SP6-201ENST00000342234 MROH2BQ7Z745 1585 aa23.2■■□□□ 1.3
SP6-201ENST00000342234 HRCP23327 699 aa23.18■■□□□ 1.3
SP6-201ENST00000342234 APLP2Q06481 763 aa23.04■■□□□ 1.28
SP6-201ENST00000342234 WIZO95785 1651 aa22.97■■□□□ 1.27
SP6-201ENST00000342234 BAZ1AQ9NRL2 1556 aaPredicted RBP22.95■■□□□ 1.26
SP6-201ENST00000342234 CCER1Q8TC90 406 aaPredicted RBP22.89■■□□□ 1.25
SP6-201ENST00000342234 CSRNP3Q8WYN3 585 aa22.81■■□□□ 1.24
SP6-201ENST00000342234 ATP1B4Q9UN42 357 aaPredicted RBP22.72■■□□□ 1.23
SP6-201ENST00000342234 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.71■■□□□ 1.23
SP6-201ENST00000342234 CCDC88BA6NC98 1476 aa22.71■■□□□ 1.23
SP6-201ENST00000342234 ZEB1P37275 1124 aaPredicted RBP22.69■■□□□ 1.22
SP6-201ENST00000342234 ABCC8Q09428 1581 aa22.66■■□□□ 1.22
SP6-201ENST00000342234 HNRNPUL2Q1KMD3 747 aaKnown RBP22.62■■□□□ 1.21
SP6-201ENST00000342234 BAZ1BQ9UIG0 1483 aaKnown RBP22.61■■□□□ 1.21
SP6-201ENST00000342234 SMARCA4P51532 1647 aa22.59■■□□□ 1.21
SP6-201ENST00000342234 SOGA1O94964 1423 aa22.54■■□□□ 1.2
SP6-201ENST00000342234 TOP2AP11388 1531 aaKnown RBP22.53■■□□□ 1.2
SP6-201ENST00000342234 WRNQ14191 1432 aaPredicted RBP eCLIP22.51■■□□□ 1.19
SP6-201ENST00000342234 ITGAEP38570 1179 aa22.45■■□□□ 1.18
SP6-201ENST00000342234 ATAD2BQ9ULI0 1458 aa22.36■■□□□ 1.17
SP6-201ENST00000342234 CEP162Q5TB80 1403 aa22.35■■□□□ 1.17
SP6-201ENST00000342234 SMARCA2P51531 1590 aa22.34■■□□□ 1.17
SP6-201ENST00000342234 RUSC2Q8N2Y8 1516 aa22.3■■□□□ 1.16
SP6-201ENST00000342234 P3H3Q8IVL6 736 aa22.28■■□□□ 1.16
SP6-201ENST00000342234 BICRAQ9NZM4 1560 aa22.26■■□□□ 1.15
SP6-201ENST00000342234 UNC13AQ9UPW8 1703 aa22.24■■□□□ 1.15
SP6-201ENST00000342234 EEA1Q15075 1411 aa22.2■■□□□ 1.14
SP6-201ENST00000342234 GOLGA3Q08378 1498 aa22.2■■□□□ 1.14
SP6-201ENST00000342234 TNIKQ9UKE5 1360 aa22.19■■□□□ 1.14
SP6-201ENST00000342234 CLIP1P30622 1438 aa22.17■■□□□ 1.14
SP6-201ENST00000342234 CEP164Q9UPV0 1460 aa22.07■■□□□ 1.12
SP6-201ENST00000342234 FAM50AQ14320 339 aaKnown RBP22.02■■□□□ 1.12
SP6-201ENST00000342234 YTHDC1Q96MU7 727 aaKnown RBP21.99■■□□□ 1.11
SP6-201ENST00000342234 KIF27Q86VH2 1401 aa21.96■■□□□ 1.11
SP6-201ENST00000342234 EIF4G1Q04637 1599 aaKnown RBP21.96■■□□□ 1.11
SP6-201ENST00000342234 ARID3CA6NKF2 412 aa21.94■■□□□ 1.1
SP6-201ENST00000342234 DIEXFQ68CQ4 756 aaKnown RBP21.92■■□□□ 1.1
SP6-201ENST00000342234 RAPGEF2Q9Y4G8 1499 aa21.91■■□□□ 1.1
SP6-201ENST00000342234 SYNJ1O43426 1573 aa21.87■■□□□ 1.09
SP6-201ENST00000342234 CUX2O14529 1486 aa21.87■■□□□ 1.09
SP6-201ENST00000342234 NCAPD3P42695 1498 aa21.86■■□□□ 1.09
SP6-201ENST00000342234 FBLN2P98095 1184 aa21.84■■□□□ 1.09
SP6-201ENST00000342234 CADPSQ9ULU8 1353 aa21.83■■□□□ 1.08
SP6-201ENST00000342234 CENPBP07199 599 aaPredicted RBP21.76■■□□□ 1.07
SP6-201ENST00000342234 KANK4Q5T7N3 995 aaPredicted RBP21.75■■□□□ 1.07
SP6-201ENST00000342234 NEUROD1Q13562 356 aa21.74■■□□□ 1.07
SP6-201ENST00000342234 VPS8Q8N3P4 1428 aa21.74■■□□□ 1.07
SP6-201ENST00000342234 CARMIL1Q5VZK9 1371 aa21.74■■□□□ 1.07
SP6-201ENST00000342234 PEG3Q9GZU2 1588 aa21.7■■□□□ 1.06
SP6-201ENST00000342234 ZNF316A6NFI3 1004 aaPredicted RBP21.68■■□□□ 1.06
SP6-201ENST00000342234 DNAJC5BQ9UF47 199 aa21.64■■□□□ 1.05
SP6-201ENST00000342234 TDRD9Q8NDG6 1382 aaKnown RBP21.64■■□□□ 1.05
SP6-201ENST00000342234 CFTRP13569 1480 aa21.61■■□□□ 1.05
SP6-201ENST00000342234 FANCD2Q9BXW9 1451 aa21.59■■□□□ 1.05
SP6-201ENST00000342234 HMGXB3Q12766 1538 aa21.58■■□□□ 1.04
SP6-201ENST00000342234 CUX1P39880 1505 aa21.56■■□□□ 1.04
SP6-201ENST00000342234 CC2D2AQ9P2K1 1620 aa21.56■■□□□ 1.04
SP6-201ENST00000342234 NESP48681 1621 aa21.55■■□□□ 1.04
SP6-201ENST00000342234 FGD5Q6ZNL6 1462 aa21.54■■□□□ 1.04
SP6-201ENST00000342234 IGF1RP08069 1367 aa21.53■■□□□ 1.04
SP6-201ENST00000342234 TOP2BQ02880 1626 aa21.52■■□□□ 1.04
SP6-201ENST00000342234 TRIM52Q96A61 297 aa21.52■■□□□ 1.04
SP6-201ENST00000342234 RAD54L2Q9Y4B4 1467 aa21.51■■□□□ 1.03
SP6-201ENST00000342234 MTUS2Q5JR59 1369 aa21.47■■□□□ 1.03
SP6-201ENST00000342234 CHIC2Q9UKJ5 165 aa21.47■■□□□ 1.03
SP6-201ENST00000342234 KIF21BO75037 1637 aa21.44■■□□□ 1.02
SP6-201ENST00000342234 PDS5BQ9NTI5 1447 aa21.43■■□□□ 1.02
SP6-201ENST00000342234 CCNB3Q8WWL7 1395 aa21.4■■□□□ 1.02
SP6-201ENST00000342234 PRXQ9BXM0 1461 aa21.39■■□□□ 1.01
SP6-201ENST00000342234 FHOD3Q2V2M9 1422 aa21.39■■□□□ 1.01
SP6-201ENST00000342234 CHMP7Q8WUX9 453 aaPredicted RBP21.39■■□□□ 1.01
SP6-201ENST00000342234 ZNF777Q9ULD5 760 aaPredicted RBP21.38■■□□□ 1.01
SP6-201ENST00000342234 ARAP1Q96P48 1450 aa21.36■■□□□ 1.01
SP6-201ENST00000342234 CNGB1Q14028 1251 aaPredicted RBP21.33■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms