Protein–RNA interactions for Protein: Q9NP50

FAM60A, Protein FAM60A, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM60AQ9NP50 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.47□□□□□ -0.09
FAM60AQ9NP50 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
FAM60AQ9NP50 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.47□□□□□ -0.09
FAM60AQ9NP50 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
FAM60AQ9NP50 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
FAM60AQ9NP50 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
FAM60AQ9NP50 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
FAM60AQ9NP50 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
FAM60AQ9NP50 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
FAM60AQ9NP50 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
FAM60AQ9NP50 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC14.47□□□□□ -0.09
FAM60AQ9NP50 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
FAM60AQ9NP50 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC14.47□□□□□ -0.09
FAM60AQ9NP50 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
FAM60AQ9NP50 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC14.47□□□□□ -0.09
FAM60AQ9NP50 DUX4L45-201ENST00000566406 1057 ntBASIC14.47□□□□□ -0.09
FAM60AQ9NP50 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC14.47□□□□□ -0.09
FAM60AQ9NP50 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC14.47□□□□□ -0.09
FAM60AQ9NP50 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
FAM60AQ9NP50 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
FAM60AQ9NP50 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
FAM60AQ9NP50 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
FAM60AQ9NP50 AC046158.3-201ENST00000624947 2558 ntBASIC14.47□□□□□ -0.09
FAM60AQ9NP50 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
FAM60AQ9NP50 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.47□□□□□ -0.09
FAM60AQ9NP50 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
FAM60AQ9NP50 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.47□□□□□ -0.09
FAM60AQ9NP50 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
FAM60AQ9NP50 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
FAM60AQ9NP50 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
FAM60AQ9NP50 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
FAM60AQ9NP50 LILRP1-201ENST00000444199 1370 ntBASIC14.47□□□□□ -0.09
FAM60AQ9NP50 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
FAM60AQ9NP50 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
FAM60AQ9NP50 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC14.46□□□□□ -0.09
FAM60AQ9NP50 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
FAM60AQ9NP50 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC14.46□□□□□ -0.09
FAM60AQ9NP50 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
FAM60AQ9NP50 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.46□□□□□ -0.09
FAM60AQ9NP50 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC14.46□□□□□ -0.09
FAM60AQ9NP50 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
FAM60AQ9NP50 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
FAM60AQ9NP50 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
FAM60AQ9NP50 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.46□□□□□ -0.09
FAM60AQ9NP50 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
FAM60AQ9NP50 CLUHP2-201ENST00000426660 1303 ntBASIC14.46□□□□□ -0.09
FAM60AQ9NP50 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC14.46□□□□□ -0.09
FAM60AQ9NP50 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.46□□□□□ -0.09
FAM60AQ9NP50 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
FAM60AQ9NP50 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
FAM60AQ9NP50 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
FAM60AQ9NP50 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
FAM60AQ9NP50 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
FAM60AQ9NP50 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
FAM60AQ9NP50 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
FAM60AQ9NP50 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
FAM60AQ9NP50 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
FAM60AQ9NP50 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC14.46□□□□□ -0.09
FAM60AQ9NP50 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
FAM60AQ9NP50 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
FAM60AQ9NP50 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
FAM60AQ9NP50 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC14.46□□□□□ -0.09
FAM60AQ9NP50 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC14.46□□□□□ -0.09
FAM60AQ9NP50 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
FAM60AQ9NP50 RPF1-202ENST00000370656 724 ntTSL 2 BASIC14.46□□□□□ -0.09
FAM60AQ9NP50 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
FAM60AQ9NP50 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
FAM60AQ9NP50 MIR1908-201ENST00000410394 80 ntBASIC14.46□□□□□ -0.09
FAM60AQ9NP50 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
FAM60AQ9NP50 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC14.46□□□□□ -0.09
FAM60AQ9NP50 AP003171.2-201ENST00000528208 925 ntBASIC14.46□□□□□ -0.09
FAM60AQ9NP50 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC14.46□□□□□ -0.09
FAM60AQ9NP50 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.46□□□□□ -0.09
FAM60AQ9NP50 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC14.46□□□□□ -0.09
FAM60AQ9NP50 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC14.46□□□□□ -0.09
FAM60AQ9NP50 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
FAM60AQ9NP50 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC14.46□□□□□ -0.09
FAM60AQ9NP50 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC14.46□□□□□ -0.09
FAM60AQ9NP50 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
FAM60AQ9NP50 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
FAM60AQ9NP50 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
FAM60AQ9NP50 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
FAM60AQ9NP50 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
FAM60AQ9NP50 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
FAM60AQ9NP50 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
FAM60AQ9NP50 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
FAM60AQ9NP50 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC14.46□□□□□ -0.1
FAM60AQ9NP50 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
FAM60AQ9NP50 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC14.46□□□□□ -0.1
FAM60AQ9NP50 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
FAM60AQ9NP50 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
FAM60AQ9NP50 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
FAM60AQ9NP50 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.1
FAM60AQ9NP50 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
FAM60AQ9NP50 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.1
FAM60AQ9NP50 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
FAM60AQ9NP50 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
FAM60AQ9NP50 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
FAM60AQ9NP50 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
FAM60AQ9NP50 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms