RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 NISCHQ9Y2I1 1504 aa37.16■■■■□ 3.54
RAB40B-202ENST00000538809 CCDC180Q9P1Z9 1646 aa33.32■■■□□ 2.92
RAB40B-202ENST00000538809 ABCC9O60706 1549 aa32.91■■■□□ 2.86
RAB40B-202ENST00000538809 RB1CC1Q8TDY2 1594 aa31.48■■■□□ 2.63
RAB40B-202ENST00000538809 NACADO15069 1562 aa31.31■■■□□ 2.6
RAB40B-202ENST00000538809 DCAF8L2P0C7V8 631 aa31.14■■■□□ 2.58
RAB40B-202ENST00000538809 UNC13AQ9UPW8 1703 aa30.98■■■□□ 2.55
RAB40B-202ENST00000538809 MYO15BQ96JP2 1530 aa30.93■■■□□ 2.54
RAB40B-202ENST00000538809 ZCCHC6Q5VYS8 1495 aaKnown RBP30.89■■■□□ 2.54
RAB40B-202ENST00000538809 DCAF1Q9Y4B6 1507 aa30.69■■■□□ 2.5
RAB40B-202ENST00000538809 PABPN1Q86U42 306 aaKnown RBP eCLIP30.61■■■□□ 2.49
RAB40B-202ENST00000538809 BICRAQ9NZM4 1560 aa30.59■■■□□ 2.49
RAB40B-202ENST00000538809 DNAJC5BQ9UF47 199 aa30.48■■■□□ 2.47
RAB40B-202ENST00000538809 SCRIBQ14160 1630 aa30.4■■■□□ 2.46
RAB40B-202ENST00000538809 SHROOM4Q9ULL8 1493 aa30.12■■■□□ 2.41
RAB40B-202ENST00000538809 CC2D2AQ9P2K1 1620 aa29.79■■■□□ 2.36
RAB40B-202ENST00000538809 EIF4G1Q04637 1599 aaKnown RBP29.79■■■□□ 2.36
RAB40B-202ENST00000538809 CECR2Q9BXF3 1484 aa29.58■■■□□ 2.33
RAB40B-202ENST00000538809 SMARCA4P51532 1647 aa29■■■□□ 2.23
RAB40B-202ENST00000538809 BAZ1AQ9NRL2 1556 aaPredicted RBP28.84■■■□□ 2.21
RAB40B-202ENST00000538809 NCAPD3P42695 1498 aa28.84■■■□□ 2.21
RAB40B-202ENST00000538809 ATAD2BQ9ULI0 1458 aa28.84■■■□□ 2.21
RAB40B-202ENST00000538809 SMARCA2P51531 1590 aa28.81■■■□□ 2.2
RAB40B-202ENST00000538809 HMGXB3Q12766 1538 aa28.75■■■□□ 2.19
RAB40B-202ENST00000538809 MROH2BQ7Z745 1585 aa28.67■■■□□ 2.18
RAB40B-202ENST00000538809 PEG3Q9GZU2 1588 aa28.66■■■□□ 2.18
RAB40B-202ENST00000538809 BAZ1BQ9UIG0 1483 aaKnown RBP28.61■■■□□ 2.17
RAB40B-202ENST00000538809 WIZO95785 1651 aa28.43■■■□□ 2.14
RAB40B-202ENST00000538809 NESP48681 1621 aa28.39■■■□□ 2.13
RAB40B-202ENST00000538809 ERCC6Q03468 1493 aa28.38■■■□□ 2.13
RAB40B-202ENST00000538809 LAMC3Q9Y6N6 1575 aa28.23■■■□□ 2.11
RAB40B-202ENST00000538809 CUX2O14529 1486 aa28.19■■■□□ 2.1
RAB40B-202ENST00000538809 KIF21AQ7Z4S6 1674 aa28.16■■■□□ 2.1
RAB40B-202ENST00000538809 RSF1Q96T23 1441 aaPredicted RBP28.13■■■□□ 2.09
RAB40B-202ENST00000538809 THOC2Q8NI27 1593 aaKnown RBP28.1■■■□□ 2.09
RAB40B-202ENST00000538809 TOP2AP11388 1531 aaKnown RBP28.02■■■□□ 2.08
RAB40B-202ENST00000538809 CADPSQ9ULU8 1353 aa27.97■■■□□ 2.07
RAB40B-202ENST00000538809 PDS5BQ9NTI5 1447 aa27.96■■■□□ 2.07
RAB40B-202ENST00000538809 PRDM2Q13029 1718 aa27.78■■■□□ 2.04
RAB40B-202ENST00000538809 MRC2Q9UBG0 1479 aa27.77■■■□□ 2.04
RAB40B-202ENST00000538809 CFTRP13569 1480 aa27.76■■■□□ 2.03
RAB40B-202ENST00000538809 CEP164Q9UPV0 1460 aa27.74■■■□□ 2.03
RAB40B-202ENST00000538809 WDR62O43379 1518 aa27.72■■■□□ 2.03
RAB40B-202ENST00000538809 FANCD2Q9BXW9 1451 aa27.72■■■□□ 2.03
RAB40B-202ENST00000538809 DNAJC5Q9H3Z4 198 aa27.69■■■□□ 2.02
RAB40B-202ENST00000538809 CCDC88BA6NC98 1476 aa27.64■■■□□ 2.02
RAB40B-202ENST00000538809 URB2Q14146 1524 aaKnown RBP27.51■■□□□ 1.99
RAB40B-202ENST00000538809 TOPBP1Q92547 1522 aa27.26■■□□□ 1.95
RAB40B-202ENST00000538809 DNMBPQ6XZF7 1577 aa27.22■■□□□ 1.95
RAB40B-202ENST00000538809 ABCC8Q09428 1581 aa27.14■■□□□ 1.94
RAB40B-202ENST00000538809 IFT140Q96RY7 1462 aa27.13■■□□□ 1.93
RAB40B-202ENST00000538809 SUPT5HO00267 1087 aaKnown RBP27.12■■□□□ 1.93
RAB40B-202ENST00000538809 ZNF608Q9ULD9 1512 aaPredicted RBP27.11■■□□□ 1.93
RAB40B-202ENST00000538809 EIF4G3O43432 1585 aaKnown RBP27.05■■□□□ 1.92
RAB40B-202ENST00000538809 TARBP1Q13395 1621 aaKnown RBP27.03■■□□□ 1.92
RAB40B-202ENST00000538809 POLA1P09884 1462 aaPredicted RBP27■■□□□ 1.91
RAB40B-202ENST00000538809 CUX1P39880 1505 aa26.94■■□□□ 1.9
RAB40B-202ENST00000538809 RAD54L2Q9Y4B4 1467 aa26.89■■□□□ 1.9
RAB40B-202ENST00000538809 FGD5Q6ZNL6 1462 aa26.88■■□□□ 1.89
RAB40B-202ENST00000538809 CHD1O14646 1710 aa26.87■■□□□ 1.89
RAB40B-202ENST00000538809 AQRO60306 1485 aaKnown RBP eCLIP26.86■■□□□ 1.89
RAB40B-202ENST00000538809 OSCARQ8IYS5 282 aa26.85■■□□□ 1.89
RAB40B-202ENST00000538809 SOGA1O94964 1423 aa26.82■■□□□ 1.88
RAB40B-202ENST00000538809 WDR97A6NE52 1622 aa26.81■■□□□ 1.88
RAB40B-202ENST00000538809 TDRD9Q8NDG6 1382 aaKnown RBP26.72■■□□□ 1.87
RAB40B-202ENST00000538809 TRIM41Q8WV44 630 aa26.7■■□□□ 1.86
RAB40B-202ENST00000538809 PBRM1Q86U86 1689 aa26.7■■□□□ 1.86
RAB40B-202ENST00000538809 RIMBP3CA6NJZ7 1639 aa26.68■■□□□ 1.86
RAB40B-202ENST00000538809 RIMBP3BA6NNM3 1639 aa26.68■■□□□ 1.86
RAB40B-202ENST00000538809 RIMBP3Q9UFD9 1639 aa26.68■■□□□ 1.86
RAB40B-202ENST00000538809 BIVM-ERCC5R4GMW8 1640 aa26.65■■□□□ 1.86
RAB40B-202ENST00000538809 SNAPC4Q5SXM2 1469 aa26.65■■□□□ 1.86
RAB40B-202ENST00000538809 SYNJ1O43426 1573 aa26.62■■□□□ 1.85
RAB40B-202ENST00000538809 TOP2BQ02880 1626 aa26.61■■□□□ 1.85
RAB40B-202ENST00000538809 ABCA5Q8WWZ7 1642 aa26.6■■□□□ 1.85
RAB40B-202ENST00000538809 FBLN2P98095 1184 aa26.58■■□□□ 1.85
RAB40B-202ENST00000538809 GRIN2BQ13224 1484 aa26.57■■□□□ 1.84
RAB40B-202ENST00000538809 ARHGEF11O15085 1522 aa26.56■■□□□ 1.84
RAB40B-202ENST00000538809 ABCA10Q8WWZ4 1543 aa26.56■■□□□ 1.84
RAB40B-202ENST00000538809 WRNQ14191 1432 aaPredicted RBP eCLIP26.55■■□□□ 1.84
RAB40B-202ENST00000538809 MAGI1Q96QZ7 1491 aaPredicted RBP26.55■■□□□ 1.84
RAB40B-202ENST00000538809 GAPVD1Q14C86 1478 aa26.53■■□□□ 1.84
RAB40B-202ENST00000538809 SYNJ2O15056 1496 aa26.45■■□□□ 1.82
RAB40B-202ENST00000538809 CLASP1Q7Z460 1538 aa26.44■■□□□ 1.82
RAB40B-202ENST00000538809 CHMP7Q8WUX9 453 aaPredicted RBP26.4■■□□□ 1.82
RAB40B-202ENST00000538809 ADAMTS12P58397 1594 aa26.37■■□□□ 1.81
RAB40B-202ENST00000538809 ARAP1Q96P48 1450 aa26.33■■□□□ 1.81
RAB40B-202ENST00000538809 GRIN2AQ12879 1464 aa26.26■■□□□ 1.79
RAB40B-202ENST00000538809 ERICH3Q5RHP9 1530 aa26.25■■□□□ 1.79
RAB40B-202ENST00000538809 CYB5RLQ6IPT4 315 aa26.24■■□□□ 1.79
RAB40B-202ENST00000538809 CEP170Q5SW79 1584 aa26.21■■□□□ 1.79
RAB40B-202ENST00000538809 FHAD1B1AJZ9 1412 aa26.18■■□□□ 1.78
RAB40B-202ENST00000538809 NUP160Q12769 1436 aa26.13■■□□□ 1.77
RAB40B-202ENST00000538809 ERCC6L2Q5T890 1561 aa26.08■■□□□ 1.77
RAB40B-202ENST00000538809 SHROOM2Q13796 1616 aa26.07■■□□□ 1.76
RAB40B-202ENST00000538809 CUL7Q14999 1698 aa26.02■■□□□ 1.76
RAB40B-202ENST00000538809 RUSC2Q8N2Y8 1516 aa26■■□□□ 1.75
RAB40B-202ENST00000538809 KIF27Q86VH2 1401 aa25.99■■□□□ 1.75
RAB40B-202ENST00000538809 IGF1RP08069 1367 aa25.9■■□□□ 1.74
RAB40B-202ENST00000538809 TRHP20396 242 aaPredicted RBP25.86■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms