RNA–Protein interactions for RNA: ENST00000416682.6

MARK3-204, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best) BASIC

Gene MARK3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-204ENST00000416682 NISCHQ9Y2I1 1504 aa32.34■■■□□ 2.77
MARK3-204ENST00000416682 SHROOM4Q9ULL8 1493 aa27.92■■■□□ 2.06
MARK3-204ENST00000416682 SUPT5HO00267 1087 aaKnown RBP27.4■■□□□ 1.98
MARK3-204ENST00000416682 ZCCHC6Q5VYS8 1495 aaKnown RBP27.32■■□□□ 1.96
MARK3-204ENST00000416682 CCDC180Q9P1Z9 1646 aa27.29■■□□□ 1.96
MARK3-204ENST00000416682 DCAF8L2P0C7V8 631 aa27.2■■□□□ 1.94
MARK3-204ENST00000416682 PELP1Q8IZL8 1130 aaKnown RBP27.09■■□□□ 1.93
MARK3-204ENST00000416682 HRCP23327 699 aa27.02■■□□□ 1.92
MARK3-204ENST00000416682 PPARGC1BQ86YN6 1023 aaKnown RBP26.79■■□□□ 1.88
MARK3-204ENST00000416682 CHIC1Q5VXU3 224 aa26.68■■□□□ 1.86
MARK3-204ENST00000416682 MYO15BQ96JP2 1530 aa26.67■■□□□ 1.86
MARK3-204ENST00000416682 PCGF6Q9BYE7 350 aa26.54■■□□□ 1.84
MARK3-204ENST00000416682 MYT1Q01538 1121 aa26.46■■□□□ 1.83
MARK3-204ENST00000416682 DCAF1Q9Y4B6 1507 aa26.34■■□□□ 1.81
MARK3-204ENST00000416682 LOC105371045A0A1W2PR82 267 aa25.99■■□□□ 1.75
MARK3-204ENST00000416682 SCRIBQ14160 1630 aa25.89■■□□□ 1.73
MARK3-204ENST00000416682 SCAF1Q9H7N4 1312 aaKnown RBP25.88■■□□□ 1.73
MARK3-204ENST00000416682 ABCC9O60706 1549 aa25.74■■□□□ 1.71
MARK3-204ENST00000416682 RSF1Q96T23 1441 aaPredicted RBP25.67■■□□□ 1.7
MARK3-204ENST00000416682 TRIM26Q12899 539 aaPredicted RBP25.56■■□□□ 1.68
MARK3-204ENST00000416682 TRIM41Q8WV44 630 aa25.44■■□□□ 1.66
MARK3-204ENST00000416682 CECR2Q9BXF3 1484 aa25.41■■□□□ 1.66
MARK3-204ENST00000416682 RB1CC1Q8TDY2 1594 aa25.41■■□□□ 1.66
MARK3-204ENST00000416682 FAM9AQ8IZU1 332 aaPredicted RBP25.35■■□□□ 1.65
MARK3-204ENST00000416682 NACADO15069 1562 aa25.31■■□□□ 1.64
MARK3-204ENST00000416682 EHMT2Q96KQ7 1210 aa25.26■■□□□ 1.63
MARK3-204ENST00000416682 MROH2BQ7Z745 1585 aa25.25■■□□□ 1.63
MARK3-204ENST00000416682 TTBK1Q5TCY1 1321 aaPredicted RBP25.23■■□□□ 1.63
MARK3-204ENST00000416682 WIZO95785 1651 aa25.1■■□□□ 1.61
MARK3-204ENST00000416682 NEUROD1Q13562 356 aa25.07■■□□□ 1.6
MARK3-204ENST00000416682 ZEB1P37275 1124 aaPredicted RBP25.07■■□□□ 1.6
MARK3-204ENST00000416682 ACIN1Q9UKV3 1341 aaKnown RBP25.02■■□□□ 1.6
MARK3-204ENST00000416682 GTF3C3Q9Y5Q9 886 aa24.97■■□□□ 1.59
MARK3-204ENST00000416682 PRKCSHP14314 528 aaPredicted RBP24.96■■□□□ 1.59
MARK3-204ENST00000416682 BAZ1AQ9NRL2 1556 aaPredicted RBP24.78■■□□□ 1.56
MARK3-204ENST00000416682 BCL11AQ9H165 835 aa24.72■■□□□ 1.55
MARK3-204ENST00000416682 PABPN1Q86U42 306 aaKnown RBP eCLIP24.71■■□□□ 1.55
MARK3-204ENST00000416682 UNC13AQ9UPW8 1703 aa24.65■■□□□ 1.54
MARK3-204ENST00000416682 EIF4G1Q04637 1599 aaKnown RBP24.63■■□□□ 1.53
MARK3-204ENST00000416682 SMARCA4P51532 1647 aa24.61■■□□□ 1.53
MARK3-204ENST00000416682 ABCC8Q09428 1581 aa24.6■■□□□ 1.53
MARK3-204ENST00000416682 CCDC88BA6NC98 1476 aa24.6■■□□□ 1.53
MARK3-204ENST00000416682 CENPBP07199 599 aaPredicted RBP24.59■■□□□ 1.53
MARK3-204ENST00000416682 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.58■■□□□ 1.53
MARK3-204ENST00000416682 TOP2AP11388 1531 aaKnown RBP24.57■■□□□ 1.52
MARK3-204ENST00000416682 CCER1Q8TC90 406 aaPredicted RBP24.51■■□□□ 1.51
MARK3-204ENST00000416682 SMARCA2P51531 1590 aa24.5■■□□□ 1.51
MARK3-204ENST00000416682 DIEXFQ68CQ4 756 aaKnown RBP24.48■■□□□ 1.51
MARK3-204ENST00000416682 YTHDC1Q96MU7 727 aaKnown RBP24.4■■□□□ 1.5
MARK3-204ENST00000416682 BICRAQ9NZM4 1560 aa24.4■■□□□ 1.5
MARK3-204ENST00000416682 SOGA1O94964 1423 aa24.4■■□□□ 1.5
MARK3-204ENST00000416682 CEP162Q5TB80 1403 aa24.34■■□□□ 1.49
MARK3-204ENST00000416682 RUSC2Q8N2Y8 1516 aa24.32■■□□□ 1.48
MARK3-204ENST00000416682 WRNQ14191 1432 aaPredicted RBP eCLIP24.3■■□□□ 1.48
MARK3-204ENST00000416682 ERICH6Q7L0X2 663 aa24.24■■□□□ 1.47
MARK3-204ENST00000416682 TNIKQ9UKE5 1360 aa24.23■■□□□ 1.47
MARK3-204ENST00000416682 UBTFP17480 764 aaKnown RBP24.22■■□□□ 1.47
MARK3-204ENST00000416682 CSRNP3Q8WYN3 585 aa24.21■■□□□ 1.47
MARK3-204ENST00000416682 EEA1Q15075 1411 aa24.13■■□□□ 1.45
MARK3-204ENST00000416682 APLP2Q06481 763 aa24.06■■□□□ 1.44
MARK3-204ENST00000416682 GOLGA3Q08378 1498 aa24.05■■□□□ 1.44
MARK3-204ENST00000416682 ATAD2BQ9ULI0 1458 aa24.05■■□□□ 1.44
MARK3-204ENST00000416682 PEG3Q9GZU2 1588 aa24.03■■□□□ 1.44
MARK3-204ENST00000416682 SYNJ1O43426 1573 aa23.99■■□□□ 1.43
MARK3-204ENST00000416682 BAZ1BQ9UIG0 1483 aaKnown RBP23.97■■□□□ 1.43
MARK3-204ENST00000416682 RANGAP1P46060 587 aaPredicted RBP23.91■■□□□ 1.42
MARK3-204ENST00000416682 MIER1Q8N108 512 aa23.9■■□□□ 1.42
MARK3-204ENST00000416682 HNRNPUL2Q1KMD3 747 aaKnown RBP23.88■■□□□ 1.41
MARK3-204ENST00000416682 CEP164Q9UPV0 1460 aa23.88■■□□□ 1.41
MARK3-204ENST00000416682 ZNF316A6NFI3 1004 aaPredicted RBP23.87■■□□□ 1.41
MARK3-204ENST00000416682 CLIP1P30622 1438 aa23.83■■□□□ 1.41
MARK3-204ENST00000416682 KIF21BO75037 1637 aa23.79■■□□□ 1.4
MARK3-204ENST00000416682 RAPGEF2Q9Y4G8 1499 aa23.75■■□□□ 1.39
MARK3-204ENST00000416682 VPS8Q8N3P4 1428 aa23.73■■□□□ 1.39
MARK3-204ENST00000416682 ANP32EQ9BTT0 268 aa23.72■■□□□ 1.39
MARK3-204ENST00000416682 SUPT16HQ9Y5B9 1047 aaKnown RBP23.61■■□□□ 1.37
MARK3-204ENST00000416682 TSHZ2Q9NRE2 1034 aa23.6■■□□□ 1.37
MARK3-204ENST00000416682 TOP2BQ02880 1626 aa23.58■■□□□ 1.37
MARK3-204ENST00000416682 NCAPD3P42695 1498 aa23.51■■□□□ 1.35
MARK3-204ENST00000416682 CUX1P39880 1505 aa23.47■■□□□ 1.35
MARK3-204ENST00000416682 BIVM-ERCC5R4GMW8 1640 aa23.45■■□□□ 1.34
MARK3-204ENST00000416682 HMGXB3Q12766 1538 aa23.42■■□□□ 1.34
MARK3-204ENST00000416682 PRXQ9BXM0 1461 aa23.41■■□□□ 1.34
MARK3-204ENST00000416682 KANK4Q5T7N3 995 aaPredicted RBP23.39■■□□□ 1.34
MARK3-204ENST00000416682 ARAP1Q96P48 1450 aa23.39■■□□□ 1.34
MARK3-204ENST00000416682 ERICH3Q5RHP9 1530 aa23.36■■□□□ 1.33
MARK3-204ENST00000416682 DHX57Q6P158 1386 aaKnown RBP23.35■■□□□ 1.33
MARK3-204ENST00000416682 CFTRP13569 1480 aa23.35■■□□□ 1.33
MARK3-204ENST00000416682 BCANQ96GW7 911 aa23.34■■□□□ 1.33
MARK3-204ENST00000416682 SLC24A1O60721 1099 aa23.33■■□□□ 1.32
MARK3-204ENST00000416682 KIF27Q86VH2 1401 aa23.3■■□□□ 1.32
MARK3-204ENST00000416682 CLSPNQ9HAW4 1339 aa23.28■■□□□ 1.32
MARK3-204ENST00000416682 RRBP1Q9P2E9 1410 aaKnown RBP23.2■■□□□ 1.3
MARK3-204ENST00000416682 ITGAEP38570 1179 aa23.19■■□□□ 1.3
MARK3-204ENST00000416682 CUX2O14529 1486 aa23.17■■□□□ 1.3
MARK3-204ENST00000416682 ARHGAP35Q9NRY4 1499 aa23.15■■□□□ 1.3
MARK3-204ENST00000416682 IGF1RP08069 1367 aa23.14■■□□□ 1.3
MARK3-204ENST00000416682 CCNB3Q8WWL7 1395 aa23.14■■□□□ 1.29
MARK3-204ENST00000416682 CADPSQ9ULU8 1353 aa23.13■■□□□ 1.29
MARK3-204ENST00000416682 ANO8Q9HCE9 1232 aaPredicted RBP23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms