RNA–Protein interactions for RNA: ENST00000528208.2

AP003171.2-201, humanhuman

BASIC

Gene AP003171.2, Length 925 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003171.2-201ENST00000528208 NISCHQ9Y2I1 1504 aa36.47■■■■□ 3.43
AP003171.2-201ENST00000528208 CCDC180Q9P1Z9 1646 aa32.39■■■□□ 2.78
AP003171.2-201ENST00000528208 ABCC9O60706 1549 aa31.36■■■□□ 2.61
AP003171.2-201ENST00000528208 ZCCHC6Q5VYS8 1495 aaKnown RBP30.48■■■□□ 2.47
AP003171.2-201ENST00000528208 NACADO15069 1562 aa30.28■■■□□ 2.44
AP003171.2-201ENST00000528208 RB1CC1Q8TDY2 1594 aa30.24■■■□□ 2.43
AP003171.2-201ENST00000528208 MYO15BQ96JP2 1530 aa30.18■■■□□ 2.42
AP003171.2-201ENST00000528208 DCAF1Q9Y4B6 1507 aa30.17■■■□□ 2.42
AP003171.2-201ENST00000528208 DCAF8L2P0C7V8 631 aa30.09■■■□□ 2.41
AP003171.2-201ENST00000528208 UNC13AQ9UPW8 1703 aa29.89■■■□□ 2.38
AP003171.2-201ENST00000528208 SCRIBQ14160 1630 aa29.57■■■□□ 2.32
AP003171.2-201ENST00000528208 BICRAQ9NZM4 1560 aa29.52■■■□□ 2.32
AP003171.2-201ENST00000528208 PABPN1Q86U42 306 aaKnown RBP eCLIP29.26■■■□□ 2.27
AP003171.2-201ENST00000528208 SHROOM4Q9ULL8 1493 aa29■■■□□ 2.23
AP003171.2-201ENST00000528208 DNAJC5BQ9UF47 199 aa28.73■■■□□ 2.19
AP003171.2-201ENST00000528208 EIF4G1Q04637 1599 aaKnown RBP28.61■■■□□ 2.17
AP003171.2-201ENST00000528208 CC2D2AQ9P2K1 1620 aa28.45■■■□□ 2.14
AP003171.2-201ENST00000528208 CECR2Q9BXF3 1484 aa28.44■■■□□ 2.14
AP003171.2-201ENST00000528208 SMARCA4P51532 1647 aa28.31■■■□□ 2.12
AP003171.2-201ENST00000528208 BAZ1AQ9NRL2 1556 aaPredicted RBP28.2■■■□□ 2.11
AP003171.2-201ENST00000528208 MROH2BQ7Z745 1585 aa28.17■■■□□ 2.1
AP003171.2-201ENST00000528208 PEG3Q9GZU2 1588 aa28.03■■■□□ 2.08
AP003171.2-201ENST00000528208 ATAD2BQ9ULI0 1458 aa28.02■■■□□ 2.08
AP003171.2-201ENST00000528208 SMARCA2P51531 1590 aa27.94■■■□□ 2.06
AP003171.2-201ENST00000528208 WIZO95785 1651 aa27.93■■■□□ 2.06
AP003171.2-201ENST00000528208 NCAPD3P42695 1498 aa27.92■■■□□ 2.06
AP003171.2-201ENST00000528208 HMGXB3Q12766 1538 aa27.87■■■□□ 2.05
AP003171.2-201ENST00000528208 RSF1Q96T23 1441 aaPredicted RBP27.85■■■□□ 2.05
AP003171.2-201ENST00000528208 BAZ1BQ9UIG0 1483 aaKnown RBP27.75■■■□□ 2.03
AP003171.2-201ENST00000528208 TOP2AP11388 1531 aaKnown RBP27.57■■■□□ 2
AP003171.2-201ENST00000528208 NESP48681 1621 aa27.29■■□□□ 1.96
AP003171.2-201ENST00000528208 CCDC88BA6NC98 1476 aa27.2■■□□□ 1.95
AP003171.2-201ENST00000528208 LAMC3Q9Y6N6 1575 aa27.18■■□□□ 1.94
AP003171.2-201ENST00000528208 SUPT5HO00267 1087 aaKnown RBP27.17■■□□□ 1.94
AP003171.2-201ENST00000528208 KIF21AQ7Z4S6 1674 aa27.07■■□□□ 1.92
AP003171.2-201ENST00000528208 CADPSQ9ULU8 1353 aa27.07■■□□□ 1.92
AP003171.2-201ENST00000528208 PRDM2Q13029 1718 aa27.06■■□□□ 1.92
AP003171.2-201ENST00000528208 CFTRP13569 1480 aa27.03■■□□□ 1.92
AP003171.2-201ENST00000528208 THOC2Q8NI27 1593 aaKnown RBP26.89■■□□□ 1.9
AP003171.2-201ENST00000528208 ERCC6Q03468 1493 aa26.88■■□□□ 1.89
AP003171.2-201ENST00000528208 PDS5BQ9NTI5 1447 aa26.83■■□□□ 1.89
AP003171.2-201ENST00000528208 FANCD2Q9BXW9 1451 aa26.81■■□□□ 1.88
AP003171.2-201ENST00000528208 CEP164Q9UPV0 1460 aa26.74■■□□□ 1.87
AP003171.2-201ENST00000528208 MRC2Q9UBG0 1479 aa26.67■■□□□ 1.86
AP003171.2-201ENST00000528208 WDR62O43379 1518 aa26.65■■□□□ 1.86
AP003171.2-201ENST00000528208 URB2Q14146 1524 aaKnown RBP26.62■■□□□ 1.85
AP003171.2-201ENST00000528208 CUX2O14529 1486 aa26.57■■□□□ 1.84
AP003171.2-201ENST00000528208 DNMBPQ6XZF7 1577 aa26.46■■□□□ 1.83
AP003171.2-201ENST00000528208 TOPBP1Q92547 1522 aa26.46■■□□□ 1.83
AP003171.2-201ENST00000528208 CUX1P39880 1505 aa26.4■■□□□ 1.82
AP003171.2-201ENST00000528208 ABCC8Q09428 1581 aa26.38■■□□□ 1.81
AP003171.2-201ENST00000528208 SYNJ1O43426 1573 aa26.3■■□□□ 1.8
AP003171.2-201ENST00000528208 BIVM-ERCC5R4GMW8 1640 aa26.28■■□□□ 1.8
AP003171.2-201ENST00000528208 POLA1P09884 1462 aaPredicted RBP26.25■■□□□ 1.79
AP003171.2-201ENST00000528208 TARBP1Q13395 1621 aaKnown RBP26.25■■□□□ 1.79
AP003171.2-201ENST00000528208 DNAJC5Q9H3Z4 198 aa26.23■■□□□ 1.79
AP003171.2-201ENST00000528208 FGD5Q6ZNL6 1462 aa26.23■■□□□ 1.79
AP003171.2-201ENST00000528208 TOP2BQ02880 1626 aa26.22■■□□□ 1.79
AP003171.2-201ENST00000528208 WRNQ14191 1432 aaPredicted RBP eCLIP26.2■■□□□ 1.78
AP003171.2-201ENST00000528208 WDR97A6NE52 1622 aa26.18■■□□□ 1.78
AP003171.2-201ENST00000528208 IFT140Q96RY7 1462 aa26.15■■□□□ 1.78
AP003171.2-201ENST00000528208 RAD54L2Q9Y4B4 1467 aa26.15■■□□□ 1.78
AP003171.2-201ENST00000528208 ZNF608Q9ULD9 1512 aaPredicted RBP26.13■■□□□ 1.77
AP003171.2-201ENST00000528208 EIF4G3O43432 1585 aaKnown RBP26.08■■□□□ 1.77
AP003171.2-201ENST00000528208 SOGA1O94964 1423 aa26.03■■□□□ 1.76
AP003171.2-201ENST00000528208 ABCA10Q8WWZ4 1543 aa25.97■■□□□ 1.75
AP003171.2-201ENST00000528208 ABCA5Q8WWZ7 1642 aa25.96■■□□□ 1.75
AP003171.2-201ENST00000528208 AQRO60306 1485 aaKnown RBP eCLIP25.94■■□□□ 1.74
AP003171.2-201ENST00000528208 PBRM1Q86U86 1689 aa25.91■■□□□ 1.74
AP003171.2-201ENST00000528208 TDRD9Q8NDG6 1382 aaKnown RBP25.89■■□□□ 1.74
AP003171.2-201ENST00000528208 GAPVD1Q14C86 1478 aa25.78■■□□□ 1.72
AP003171.2-201ENST00000528208 CHD1O14646 1710 aa25.77■■□□□ 1.72
AP003171.2-201ENST00000528208 SNAPC4Q5SXM2 1469 aa25.73■■□□□ 1.71
AP003171.2-201ENST00000528208 GRIN2BQ13224 1484 aa25.72■■□□□ 1.71
AP003171.2-201ENST00000528208 ADAMTS12P58397 1594 aa25.66■■□□□ 1.7
AP003171.2-201ENST00000528208 MAGI1Q96QZ7 1491 aaPredicted RBP25.65■■□□□ 1.7
AP003171.2-201ENST00000528208 ERICH3Q5RHP9 1530 aa25.63■■□□□ 1.69
AP003171.2-201ENST00000528208 RUSC2Q8N2Y8 1516 aa25.63■■□□□ 1.69
AP003171.2-201ENST00000528208 TRIM41Q8WV44 630 aa25.59■■□□□ 1.69
AP003171.2-201ENST00000528208 CHIC1Q5VXU3 224 aa25.58■■□□□ 1.69
AP003171.2-201ENST00000528208 KIF27Q86VH2 1401 aa25.57■■□□□ 1.68
AP003171.2-201ENST00000528208 SYNJ2O15056 1496 aa25.55■■□□□ 1.68
AP003171.2-201ENST00000528208 CUL7Q14999 1698 aa25.5■■□□□ 1.67
AP003171.2-201ENST00000528208 IGF1RP08069 1367 aa25.49■■□□□ 1.67
AP003171.2-201ENST00000528208 FHAD1B1AJZ9 1412 aa25.46■■□□□ 1.67
AP003171.2-201ENST00000528208 GRIN2AQ12879 1464 aa25.46■■□□□ 1.67
AP003171.2-201ENST00000528208 CEP170Q5SW79 1584 aa25.43■■□□□ 1.66
AP003171.2-201ENST00000528208 CLASP1Q7Z460 1538 aa25.42■■□□□ 1.66
AP003171.2-201ENST00000528208 FBLN2P98095 1184 aa25.38■■□□□ 1.65
AP003171.2-201ENST00000528208 OSCARQ8IYS5 282 aa25.36■■□□□ 1.65
AP003171.2-201ENST00000528208 CHMP7Q8WUX9 453 aaPredicted RBP25.35■■□□□ 1.65
AP003171.2-201ENST00000528208 NUP160Q12769 1436 aa25.35■■□□□ 1.65
AP003171.2-201ENST00000528208 CARMIL1Q5VZK9 1371 aa25.31■■□□□ 1.64
AP003171.2-201ENST00000528208 PRXQ9BXM0 1461 aa25.26■■□□□ 1.63
AP003171.2-201ENST00000528208 SHROOM2Q13796 1616 aa25.23■■□□□ 1.63
AP003171.2-201ENST00000528208 RIMBP3CA6NJZ7 1639 aa25.22■■□□□ 1.63
AP003171.2-201ENST00000528208 RIMBP3BA6NNM3 1639 aa25.22■■□□□ 1.63
AP003171.2-201ENST00000528208 RIMBP3Q9UFD9 1639 aa25.22■■□□□ 1.63
AP003171.2-201ENST00000528208 RAPGEF2Q9Y4G8 1499 aa25.21■■□□□ 1.63
AP003171.2-201ENST00000528208 EEA1Q15075 1411 aa25.21■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms