RNA–Protein interactions for RNA: ENST00000390627.3

IGHV3-53-201, Transcript of immunoglobulin heavy variable 3-53, humanhuman

APPRIS P1 BASIC

Gene IGHV3-53, Length 571 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-53-201ENST00000390627 NISCHQ9Y2I1 1504 aa36.28■■■■□ 3.4
IGHV3-53-201ENST00000390627 CCDC180Q9P1Z9 1646 aa32.22■■■□□ 2.75
IGHV3-53-201ENST00000390627 ABCC9O60706 1549 aa31.37■■■□□ 2.61
IGHV3-53-201ENST00000390627 NACADO15069 1562 aa30.28■■■□□ 2.44
IGHV3-53-201ENST00000390627 RB1CC1Q8TDY2 1594 aa30.28■■■□□ 2.44
IGHV3-53-201ENST00000390627 ZCCHC6Q5VYS8 1495 aaKnown RBP30.26■■■□□ 2.44
IGHV3-53-201ENST00000390627 DCAF8L2P0C7V8 631 aa30.23■■■□□ 2.43
IGHV3-53-201ENST00000390627 MYO15BQ96JP2 1530 aa30.14■■■□□ 2.42
IGHV3-53-201ENST00000390627 DCAF1Q9Y4B6 1507 aa30.05■■■□□ 2.4
IGHV3-53-201ENST00000390627 UNC13AQ9UPW8 1703 aa29.53■■■□□ 2.32
IGHV3-53-201ENST00000390627 SCRIBQ14160 1630 aa29.39■■■□□ 2.3
IGHV3-53-201ENST00000390627 PABPN1Q86U42 306 aaKnown RBP eCLIP29.31■■■□□ 2.28
IGHV3-53-201ENST00000390627 BICRAQ9NZM4 1560 aa29.3■■■□□ 2.28
IGHV3-53-201ENST00000390627 SHROOM4Q9ULL8 1493 aa29.1■■■□□ 2.25
IGHV3-53-201ENST00000390627 DNAJC5BQ9UF47 199 aa28.61■■■□□ 2.17
IGHV3-53-201ENST00000390627 EIF4G1Q04637 1599 aaKnown RBP28.55■■■□□ 2.16
IGHV3-53-201ENST00000390627 CC2D2AQ9P2K1 1620 aa28.4■■■□□ 2.14
IGHV3-53-201ENST00000390627 CECR2Q9BXF3 1484 aa28.21■■■□□ 2.11
IGHV3-53-201ENST00000390627 BAZ1AQ9NRL2 1556 aaPredicted RBP28.13■■■□□ 2.09
IGHV3-53-201ENST00000390627 SMARCA4P51532 1647 aa28.13■■■□□ 2.09
IGHV3-53-201ENST00000390627 SMARCA2P51531 1590 aa27.94■■■□□ 2.06
IGHV3-53-201ENST00000390627 ATAD2BQ9ULI0 1458 aa27.94■■■□□ 2.06
IGHV3-53-201ENST00000390627 MROH2BQ7Z745 1585 aa27.94■■■□□ 2.06
IGHV3-53-201ENST00000390627 NCAPD3P42695 1498 aa27.91■■■□□ 2.06
IGHV3-53-201ENST00000390627 PEG3Q9GZU2 1588 aa27.86■■■□□ 2.05
IGHV3-53-201ENST00000390627 HMGXB3Q12766 1538 aa27.81■■■□□ 2.04
IGHV3-53-201ENST00000390627 BAZ1BQ9UIG0 1483 aaKnown RBP27.74■■■□□ 2.03
IGHV3-53-201ENST00000390627 RSF1Q96T23 1441 aaPredicted RBP27.67■■■□□ 2.02
IGHV3-53-201ENST00000390627 WIZO95785 1651 aa27.64■■■□□ 2.02
IGHV3-53-201ENST00000390627 TOP2AP11388 1531 aaKnown RBP27.4■■□□□ 1.98
IGHV3-53-201ENST00000390627 LAMC3Q9Y6N6 1575 aa27.18■■□□□ 1.94
IGHV3-53-201ENST00000390627 NESP48681 1621 aa27.16■■□□□ 1.94
IGHV3-53-201ENST00000390627 CADPSQ9ULU8 1353 aa27.1■■□□□ 1.93
IGHV3-53-201ENST00000390627 ERCC6Q03468 1493 aa27.07■■□□□ 1.92
IGHV3-53-201ENST00000390627 SUPT5HO00267 1087 aaKnown RBP27.05■■□□□ 1.92
IGHV3-53-201ENST00000390627 CCDC88BA6NC98 1476 aa27.04■■□□□ 1.92
IGHV3-53-201ENST00000390627 PDS5BQ9NTI5 1447 aa26.99■■□□□ 1.91
IGHV3-53-201ENST00000390627 CFTRP13569 1480 aa26.97■■□□□ 1.91
IGHV3-53-201ENST00000390627 KIF21AQ7Z4S6 1674 aa26.86■■□□□ 1.89
IGHV3-53-201ENST00000390627 FANCD2Q9BXW9 1451 aa26.8■■□□□ 1.88
IGHV3-53-201ENST00000390627 PRDM2Q13029 1718 aa26.79■■□□□ 1.88
IGHV3-53-201ENST00000390627 CEP164Q9UPV0 1460 aa26.77■■□□□ 1.88
IGHV3-53-201ENST00000390627 THOC2Q8NI27 1593 aaKnown RBP26.76■■□□□ 1.87
IGHV3-53-201ENST00000390627 CUX2O14529 1486 aa26.75■■□□□ 1.87
IGHV3-53-201ENST00000390627 MRC2Q9UBG0 1479 aa26.7■■□□□ 1.87
IGHV3-53-201ENST00000390627 WDR62O43379 1518 aa26.6■■□□□ 1.85
IGHV3-53-201ENST00000390627 URB2Q14146 1524 aaKnown RBP26.5■■□□□ 1.83
IGHV3-53-201ENST00000390627 ABCC8Q09428 1581 aa26.42■■□□□ 1.82
IGHV3-53-201ENST00000390627 TOPBP1Q92547 1522 aa26.38■■□□□ 1.81
IGHV3-53-201ENST00000390627 DNMBPQ6XZF7 1577 aa26.37■■□□□ 1.81
IGHV3-53-201ENST00000390627 CUX1P39880 1505 aa26.22■■□□□ 1.79
IGHV3-53-201ENST00000390627 IFT140Q96RY7 1462 aa26.21■■□□□ 1.79
IGHV3-53-201ENST00000390627 POLA1P09884 1462 aaPredicted RBP26.17■■□□□ 1.78
IGHV3-53-201ENST00000390627 FGD5Q6ZNL6 1462 aa26.12■■□□□ 1.77
IGHV3-53-201ENST00000390627 WRNQ14191 1432 aaPredicted RBP eCLIP26.12■■□□□ 1.77
IGHV3-53-201ENST00000390627 TARBP1Q13395 1621 aaKnown RBP26.06■■□□□ 1.76
IGHV3-53-201ENST00000390627 SOGA1O94964 1423 aa26.05■■□□□ 1.76
IGHV3-53-201ENST00000390627 TOP2BQ02880 1626 aa26.04■■□□□ 1.76
IGHV3-53-201ENST00000390627 BIVM-ERCC5R4GMW8 1640 aa26.03■■□□□ 1.76
IGHV3-53-201ENST00000390627 RAD54L2Q9Y4B4 1467 aa26.03■■□□□ 1.76
IGHV3-53-201ENST00000390627 ZNF608Q9ULD9 1512 aaPredicted RBP26.03■■□□□ 1.76
IGHV3-53-201ENST00000390627 SYNJ1O43426 1573 aa26.02■■□□□ 1.76
IGHV3-53-201ENST00000390627 EIF4G3O43432 1585 aaKnown RBP25.96■■□□□ 1.75
IGHV3-53-201ENST00000390627 WDR97A6NE52 1622 aa25.93■■□□□ 1.74
IGHV3-53-201ENST00000390627 AQRO60306 1485 aaKnown RBP eCLIP25.9■■□□□ 1.74
IGHV3-53-201ENST00000390627 ABCA10Q8WWZ4 1543 aa25.88■■□□□ 1.73
IGHV3-53-201ENST00000390627 TDRD9Q8NDG6 1382 aaKnown RBP25.87■■□□□ 1.73
IGHV3-53-201ENST00000390627 GAPVD1Q14C86 1478 aa25.77■■□□□ 1.72
IGHV3-53-201ENST00000390627 ABCA5Q8WWZ7 1642 aa25.77■■□□□ 1.72
IGHV3-53-201ENST00000390627 GRIN2BQ13224 1484 aa25.76■■□□□ 1.71
IGHV3-53-201ENST00000390627 DNAJC5Q9H3Z4 198 aa25.72■■□□□ 1.71
IGHV3-53-201ENST00000390627 SNAPC4Q5SXM2 1469 aa25.7■■□□□ 1.7
IGHV3-53-201ENST00000390627 PBRM1Q86U86 1689 aa25.7■■□□□ 1.7
IGHV3-53-201ENST00000390627 MAGI1Q96QZ7 1491 aaPredicted RBP25.69■■□□□ 1.7
IGHV3-53-201ENST00000390627 OSCARQ8IYS5 282 aa25.63■■□□□ 1.69
IGHV3-53-201ENST00000390627 CHD1O14646 1710 aa25.6■■□□□ 1.69
IGHV3-53-201ENST00000390627 ERICH3Q5RHP9 1530 aa25.58■■□□□ 1.69
IGHV3-53-201ENST00000390627 FBLN2P98095 1184 aa25.58■■□□□ 1.69
IGHV3-53-201ENST00000390627 SYNJ2O15056 1496 aa25.58■■□□□ 1.69
IGHV3-53-201ENST00000390627 KIF27Q86VH2 1401 aa25.57■■□□□ 1.68
IGHV3-53-201ENST00000390627 TRIM41Q8WV44 630 aa25.57■■□□□ 1.68
IGHV3-53-201ENST00000390627 CHMP7Q8WUX9 453 aaPredicted RBP25.54■■□□□ 1.68
IGHV3-53-201ENST00000390627 ADAMTS12P58397 1594 aa25.52■■□□□ 1.68
IGHV3-53-201ENST00000390627 FHAD1B1AJZ9 1412 aa25.49■■□□□ 1.67
IGHV3-53-201ENST00000390627 GRIN2AQ12879 1464 aa25.42■■□□□ 1.66
IGHV3-53-201ENST00000390627 IGF1RP08069 1367 aa25.41■■□□□ 1.66
IGHV3-53-201ENST00000390627 CUL7Q14999 1698 aa25.39■■□□□ 1.65
IGHV3-53-201ENST00000390627 CLASP1Q7Z460 1538 aa25.33■■□□□ 1.65
IGHV3-53-201ENST00000390627 CHIC1Q5VXU3 224 aa25.31■■□□□ 1.64
IGHV3-53-201ENST00000390627 RUSC2Q8N2Y8 1516 aa25.31■■□□□ 1.64
IGHV3-53-201ENST00000390627 NUP160Q12769 1436 aa25.3■■□□□ 1.64
IGHV3-53-201ENST00000390627 CARMIL1Q5VZK9 1371 aa25.29■■□□□ 1.64
IGHV3-53-201ENST00000390627 CEP170Q5SW79 1584 aa25.27■■□□□ 1.64
IGHV3-53-201ENST00000390627 ARHGEF11O15085 1522 aa25.22■■□□□ 1.63
IGHV3-53-201ENST00000390627 RIMBP3CA6NJZ7 1639 aa25.2■■□□□ 1.62
IGHV3-53-201ENST00000390627 RIMBP3BA6NNM3 1639 aa25.2■■□□□ 1.62
IGHV3-53-201ENST00000390627 RIMBP3Q9UFD9 1639 aa25.2■■□□□ 1.62
IGHV3-53-201ENST00000390627 EEA1Q15075 1411 aa25.19■■□□□ 1.62
IGHV3-53-201ENST00000390627 RAPGEF2Q9Y4G8 1499 aa25.16■■□□□ 1.62
IGHV3-53-201ENST00000390627 PRXQ9BXM0 1461 aa25.09■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms