Protein–RNA interactions for Protein: Q8N112

LSMEM2, Leucine-rich single-pass membrane protein 2, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM2Q8N112 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LSMEM2Q8N112 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LSMEM2Q8N112 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
LSMEM2Q8N112 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LSMEM2Q8N112 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LSMEM2Q8N112 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
LSMEM2Q8N112 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LSMEM2Q8N112 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC15.32■□□□□ 0.04
LSMEM2Q8N112 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LSMEM2Q8N112 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC15.32■□□□□ 0.04
LSMEM2Q8N112 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC15.32■□□□□ 0.04
LSMEM2Q8N112 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
LSMEM2Q8N112 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LSMEM2Q8N112 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
LSMEM2Q8N112 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LSMEM2Q8N112 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LSMEM2Q8N112 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
LSMEM2Q8N112 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
LSMEM2Q8N112 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LSMEM2Q8N112 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
LSMEM2Q8N112 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
LSMEM2Q8N112 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.31■□□□□ 0.04
LSMEM2Q8N112 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
LSMEM2Q8N112 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC15.31■□□□□ 0.04
LSMEM2Q8N112 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
LSMEM2Q8N112 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC15.31■□□□□ 0.04
LSMEM2Q8N112 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC15.31■□□□□ 0.04
LSMEM2Q8N112 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LSMEM2Q8N112 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LSMEM2Q8N112 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
LSMEM2Q8N112 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LSMEM2Q8N112 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC15.31■□□□□ 0.04
LSMEM2Q8N112 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
LSMEM2Q8N112 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC15.31■□□□□ 0.04
LSMEM2Q8N112 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LSMEM2Q8N112 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LSMEM2Q8N112 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
LSMEM2Q8N112 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LSMEM2Q8N112 KLF2P4-201ENST00000451959 1225 ntBASIC15.31■□□□□ 0.04
LSMEM2Q8N112 BNIP3P42-201ENST00000454982 569 ntBASIC15.31■□□□□ 0.04
LSMEM2Q8N112 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC15.31■□□□□ 0.04
LSMEM2Q8N112 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LSMEM2Q8N112 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC15.31■□□□□ 0.04
LSMEM2Q8N112 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC15.31■□□□□ 0.04
LSMEM2Q8N112 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC15.31■□□□□ 0.04
LSMEM2Q8N112 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
LSMEM2Q8N112 BNIP3P29-201ENST00000598302 571 ntBASIC15.31■□□□□ 0.04
LSMEM2Q8N112 AC011447.5-201ENST00000616168 564 ntBASIC15.31■□□□□ 0.04
LSMEM2Q8N112 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LSMEM2Q8N112 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LSMEM2Q8N112 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LSMEM2Q8N112 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
LSMEM2Q8N112 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LSMEM2Q8N112 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LSMEM2Q8N112 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LSMEM2Q8N112 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC15.31■□□□□ 0.04
LSMEM2Q8N112 AC084364.1-201ENST00000551967 1556 ntBASIC15.31■□□□□ 0.04
LSMEM2Q8N112 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
LSMEM2Q8N112 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LSMEM2Q8N112 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LSMEM2Q8N112 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
LSMEM2Q8N112 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
LSMEM2Q8N112 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC15.31■□□□□ 0.04
LSMEM2Q8N112 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
LSMEM2Q8N112 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LSMEM2Q8N112 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
LSMEM2Q8N112 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LSMEM2Q8N112 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
LSMEM2Q8N112 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LSMEM2Q8N112 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
LSMEM2Q8N112 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LSMEM2Q8N112 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC15.31■□□□□ 0.04
LSMEM2Q8N112 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC15.31■□□□□ 0.04
LSMEM2Q8N112 CICP14-201ENST00000629111 2732 ntBASIC15.3■□□□□ 0.04
LSMEM2Q8N112 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
LSMEM2Q8N112 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC15.3■□□□□ 0.04
LSMEM2Q8N112 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LSMEM2Q8N112 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
LSMEM2Q8N112 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LSMEM2Q8N112 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LSMEM2Q8N112 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LSMEM2Q8N112 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LSMEM2Q8N112 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LSMEM2Q8N112 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LSMEM2Q8N112 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LSMEM2Q8N112 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.3■□□□□ 0.04
LSMEM2Q8N112 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LSMEM2Q8N112 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
LSMEM2Q8N112 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
LSMEM2Q8N112 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LSMEM2Q8N112 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LSMEM2Q8N112 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LSMEM2Q8N112 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC15.3■□□□□ 0.04
LSMEM2Q8N112 TUBB1P2-201ENST00000422712 1306 ntBASIC15.3■□□□□ 0.04
LSMEM2Q8N112 ACE3P-201ENST00000423435 1973 ntBASIC15.3■□□□□ 0.04
LSMEM2Q8N112 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC15.3■□□□□ 0.04
LSMEM2Q8N112 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC15.3■□□□□ 0.04
LSMEM2Q8N112 HIST3H2BA-201ENST00000436555 524 ntBASIC15.3■□□□□ 0.04
LSMEM2Q8N112 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
LSMEM2Q8N112 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms