RNA–Protein interactions for RNA: ENST00000584527.1

SPECC1-223, Transcript of sperm antigen with calponin homology and coiled-coil domains 1, humanhuman

TSL 3 BASIC

Gene SPECC1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPECC1-223ENST00000584527 NISCHQ9Y2I1 1504 aa37.92■■■■□ 3.66
SPECC1-223ENST00000584527 CCDC180Q9P1Z9 1646 aa34.12■■■■□ 3.05
SPECC1-223ENST00000584527 ABCC9O60706 1549 aa33.96■■■■□ 3.03
SPECC1-223ENST00000584527 RB1CC1Q8TDY2 1594 aa32.43■■■□□ 2.78
SPECC1-223ENST00000584527 NACADO15069 1562 aa32.23■■■□□ 2.75
SPECC1-223ENST00000584527 MYO15BQ96JP2 1530 aa31.88■■■□□ 2.69
SPECC1-223ENST00000584527 DNAJC5BQ9UF47 199 aa31.83■■■□□ 2.69
SPECC1-223ENST00000584527 DCAF8L2P0C7V8 631 aa31.75■■■□□ 2.67
SPECC1-223ENST00000584527 UNC13AQ9UPW8 1703 aa31.66■■■□□ 2.66
SPECC1-223ENST00000584527 PABPN1Q86U42 306 aaKnown RBP eCLIP31.53■■■□□ 2.64
SPECC1-223ENST00000584527 BICRAQ9NZM4 1560 aa31.47■■■□□ 2.63
SPECC1-223ENST00000584527 ZCCHC6Q5VYS8 1495 aaKnown RBP31.46■■■□□ 2.63
SPECC1-223ENST00000584527 DCAF1Q9Y4B6 1507 aa31.43■■■□□ 2.62
SPECC1-223ENST00000584527 SHROOM4Q9ULL8 1493 aa31.21■■■□□ 2.59
SPECC1-223ENST00000584527 SCRIBQ14160 1630 aa30.94■■■□□ 2.54
SPECC1-223ENST00000584527 CC2D2AQ9P2K1 1620 aa30.74■■■□□ 2.51
SPECC1-223ENST00000584527 EIF4G1Q04637 1599 aaKnown RBP30.71■■■□□ 2.51
SPECC1-223ENST00000584527 CECR2Q9BXF3 1484 aa30.65■■■□□ 2.5
SPECC1-223ENST00000584527 NCAPD3P42695 1498 aa29.74■■■□□ 2.35
SPECC1-223ENST00000584527 ATAD2BQ9ULI0 1458 aa29.61■■■□□ 2.33
SPECC1-223ENST00000584527 SMARCA4P51532 1647 aa29.59■■■□□ 2.33
SPECC1-223ENST00000584527 SMARCA2P51531 1590 aa29.57■■■□□ 2.32
SPECC1-223ENST00000584527 HMGXB3Q12766 1538 aa29.56■■■□□ 2.32
SPECC1-223ENST00000584527 BAZ1AQ9NRL2 1556 aaPredicted RBP29.47■■■□□ 2.31
SPECC1-223ENST00000584527 CUX2O14529 1486 aa29.42■■■□□ 2.3
SPECC1-223ENST00000584527 PEG3Q9GZU2 1588 aa29.39■■■□□ 2.3
SPECC1-223ENST00000584527 ERCC6Q03468 1493 aa29.35■■■□□ 2.29
SPECC1-223ENST00000584527 DNAJC5Q9H3Z4 198 aa29.32■■■□□ 2.28
SPECC1-223ENST00000584527 BAZ1BQ9UIG0 1483 aaKnown RBP29.31■■■□□ 2.28
SPECC1-223ENST00000584527 NESP48681 1621 aa29.17■■■□□ 2.26
SPECC1-223ENST00000584527 MROH2BQ7Z745 1585 aa29.17■■■□□ 2.26
SPECC1-223ENST00000584527 LAMC3Q9Y6N6 1575 aa29.09■■■□□ 2.25
SPECC1-223ENST00000584527 THOC2Q8NI27 1593 aaKnown RBP28.99■■■□□ 2.23
SPECC1-223ENST00000584527 PDS5BQ9NTI5 1447 aa28.87■■■□□ 2.21
SPECC1-223ENST00000584527 KIF21AQ7Z4S6 1674 aa28.84■■■□□ 2.21
SPECC1-223ENST00000584527 WIZO95785 1651 aa28.8■■■□□ 2.2
SPECC1-223ENST00000584527 CADPSQ9ULU8 1353 aa28.79■■■□□ 2.2
SPECC1-223ENST00000584527 MRC2Q9UBG0 1479 aa28.64■■■□□ 2.17
SPECC1-223ENST00000584527 WDR62O43379 1518 aa28.6■■■□□ 2.17
SPECC1-223ENST00000584527 RSF1Q96T23 1441 aaPredicted RBP28.57■■■□□ 2.16
SPECC1-223ENST00000584527 TOP2AP11388 1531 aaKnown RBP28.52■■■□□ 2.16
SPECC1-223ENST00000584527 CEP164Q9UPV0 1460 aa28.51■■■□□ 2.15
SPECC1-223ENST00000584527 CFTRP13569 1480 aa28.5■■■□□ 2.15
SPECC1-223ENST00000584527 FANCD2Q9BXW9 1451 aa28.46■■■□□ 2.15
SPECC1-223ENST00000584527 PRDM2Q13029 1718 aa28.23■■■□□ 2.11
SPECC1-223ENST00000584527 URB2Q14146 1524 aaKnown RBP28.23■■■□□ 2.11
SPECC1-223ENST00000584527 CCDC88BA6NC98 1476 aa28.13■■■□□ 2.09
SPECC1-223ENST00000584527 IFT140Q96RY7 1462 aa27.95■■■□□ 2.07
SPECC1-223ENST00000584527 OSCARQ8IYS5 282 aa27.94■■■□□ 2.06
SPECC1-223ENST00000584527 TOPBP1Q92547 1522 aa27.92■■■□□ 2.06
SPECC1-223ENST00000584527 ABCC8Q09428 1581 aa27.91■■■□□ 2.06
SPECC1-223ENST00000584527 TRIM41Q8WV44 630 aa27.89■■■□□ 2.06
SPECC1-223ENST00000584527 DNMBPQ6XZF7 1577 aa27.85■■■□□ 2.05
SPECC1-223ENST00000584527 ZNF608Q9ULD9 1512 aaPredicted RBP27.84■■■□□ 2.05
SPECC1-223ENST00000584527 EIF4G3O43432 1585 aaKnown RBP27.75■■■□□ 2.03
SPECC1-223ENST00000584527 TARBP1Q13395 1621 aaKnown RBP27.7■■■□□ 2.03
SPECC1-223ENST00000584527 POLA1P09884 1462 aaPredicted RBP27.64■■■□□ 2.02
SPECC1-223ENST00000584527 RIMBP3CA6NJZ7 1639 aa27.63■■■□□ 2.01
SPECC1-223ENST00000584527 RIMBP3BA6NNM3 1639 aa27.63■■■□□ 2.01
SPECC1-223ENST00000584527 RIMBP3Q9UFD9 1639 aa27.63■■■□□ 2.01
SPECC1-223ENST00000584527 AQRO60306 1485 aaKnown RBP eCLIP27.57■■■□□ 2
SPECC1-223ENST00000584527 ARHGEF11O15085 1522 aa27.57■■■□□ 2
SPECC1-223ENST00000584527 WDR97A6NE52 1622 aa27.52■■■□□ 2
SPECC1-223ENST00000584527 CHD1O14646 1710 aa27.51■■□□□ 1.99
SPECC1-223ENST00000584527 SOGA1O94964 1423 aa27.47■■□□□ 1.99
SPECC1-223ENST00000584527 RAD54L2Q9Y4B4 1467 aa27.46■■□□□ 1.99
SPECC1-223ENST00000584527 FGD5Q6ZNL6 1462 aa27.44■■□□□ 1.98
SPECC1-223ENST00000584527 CUX1P39880 1505 aa27.41■■□□□ 1.98
SPECC1-223ENST00000584527 TDRD9Q8NDG6 1382 aaKnown RBP27.38■■□□□ 1.97
SPECC1-223ENST00000584527 SNAPC4Q5SXM2 1469 aa27.33■■□□□ 1.97
SPECC1-223ENST00000584527 MAGI1Q96QZ7 1491 aaPredicted RBP27.32■■□□□ 1.96
SPECC1-223ENST00000584527 FBLN2P98095 1184 aa27.29■■□□□ 1.96
SPECC1-223ENST00000584527 GRIN2BQ13224 1484 aa27.29■■□□□ 1.96
SPECC1-223ENST00000584527 ARAP1Q96P48 1450 aa27.28■■□□□ 1.96
SPECC1-223ENST00000584527 CLASP1Q7Z460 1538 aa27.26■■□□□ 1.95
SPECC1-223ENST00000584527 CYB5RLQ6IPT4 315 aa27.23■■□□□ 1.95
SPECC1-223ENST00000584527 SYNJ1O43426 1573 aa27.22■■□□□ 1.95
SPECC1-223ENST00000584527 SYNJ2O15056 1496 aa27.21■■□□□ 1.95
SPECC1-223ENST00000584527 ABCA10Q8WWZ4 1543 aa27.18■■□□□ 1.94
SPECC1-223ENST00000584527 PBRM1Q86U86 1689 aa27.17■■□□□ 1.94
SPECC1-223ENST00000584527 CHMP7Q8WUX9 453 aaPredicted RBP27.16■■□□□ 1.94
SPECC1-223ENST00000584527 GAPVD1Q14C86 1478 aa27.16■■□□□ 1.94
SPECC1-223ENST00000584527 ABCA5Q8WWZ7 1642 aa27.16■■□□□ 1.94
SPECC1-223ENST00000584527 SUPT5HO00267 1087 aaKnown RBP27.09■■□□□ 1.93
SPECC1-223ENST00000584527 WRNQ14191 1432 aaPredicted RBP eCLIP27.03■■□□□ 1.92
SPECC1-223ENST00000584527 BIVM-ERCC5R4GMW8 1640 aa27.03■■□□□ 1.92
SPECC1-223ENST00000584527 TOP2BQ02880 1626 aa27.01■■□□□ 1.92
SPECC1-223ENST00000584527 GRIN2AQ12879 1464 aa26.93■■□□□ 1.9
SPECC1-223ENST00000584527 ADAMTS12P58397 1594 aa26.93■■□□□ 1.9
SPECC1-223ENST00000584527 TRHP20396 242 aaPredicted RBP26.91■■□□□ 1.9
SPECC1-223ENST00000584527 NUP160Q12769 1436 aa26.88■■□□□ 1.89
SPECC1-223ENST00000584527 ERICH3Q5RHP9 1530 aa26.85■■□□□ 1.89
SPECC1-223ENST00000584527 FHAD1B1AJZ9 1412 aa26.84■■□□□ 1.89
SPECC1-223ENST00000584527 CEP170Q5SW79 1584 aa26.83■■□□□ 1.89
SPECC1-223ENST00000584527 SHROOM2Q13796 1616 aa26.78■■□□□ 1.88
SPECC1-223ENST00000584527 ERCC6L2Q5T890 1561 aa26.74■■□□□ 1.87
SPECC1-223ENST00000584527 RUSC2Q8N2Y8 1516 aa26.57■■□□□ 1.84
SPECC1-223ENST00000584527 PRG4Q92954 1404 aaPredicted RBP26.54■■□□□ 1.84
SPECC1-223ENST00000584527 JPH4Q96JJ6 628 aa26.49■■□□□ 1.83
SPECC1-223ENST00000584527 CUL7Q14999 1698 aa26.46■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms