RNA–Protein interactions for RNA: ENST00000356613.3

ARC-201, Transcript of activity regulated cytoskeleton associated protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARC, Length 2,948 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARC-201ENST00000356613 NISCHQ9Y2I1 1504 aa30.61■■■□□ 2.49
ARC-201ENST00000356613 SHROOM4Q9ULL8 1493 aa26.25■■□□□ 1.79
ARC-201ENST00000356613 ZCCHC6Q5VYS8 1495 aaKnown RBP25.96■■□□□ 1.75
ARC-201ENST00000356613 CCDC180Q9P1Z9 1646 aa25.92■■□□□ 1.74
ARC-201ENST00000356613 SUPT5HO00267 1087 aaKnown RBP25.85■■□□□ 1.73
ARC-201ENST00000356613 DCAF8L2P0C7V8 631 aa25.4■■□□□ 1.66
ARC-201ENST00000356613 MYO15BQ96JP2 1530 aa25.38■■□□□ 1.65
ARC-201ENST00000356613 CHIC1Q5VXU3 224 aa25.34■■□□□ 1.65
ARC-201ENST00000356613 DCAF1Q9Y4B6 1507 aa25.12■■□□□ 1.61
ARC-201ENST00000356613 HRCP23327 699 aa25.04■■□□□ 1.6
ARC-201ENST00000356613 PELP1Q8IZL8 1130 aaKnown RBP24.94■■□□□ 1.58
ARC-201ENST00000356613 PCGF6Q9BYE7 350 aa24.8■■□□□ 1.56
ARC-201ENST00000356613 LOC105371045A0A1W2PR82 267 aa24.6■■□□□ 1.53
ARC-201ENST00000356613 ABCC9O60706 1549 aa24.55■■□□□ 1.52
ARC-201ENST00000356613 PPARGC1BQ86YN6 1023 aaKnown RBP24.48■■□□□ 1.51
ARC-201ENST00000356613 RSF1Q96T23 1441 aaPredicted RBP24.34■■□□□ 1.49
ARC-201ENST00000356613 SCRIBQ14160 1630 aa24.33■■□□□ 1.49
ARC-201ENST00000356613 TRIM26Q12899 539 aaPredicted RBP24.27■■□□□ 1.48
ARC-201ENST00000356613 MYT1Q01538 1121 aa24.14■■□□□ 1.46
ARC-201ENST00000356613 RB1CC1Q8TDY2 1594 aa24.14■■□□□ 1.45
ARC-201ENST00000356613 TRIM41Q8WV44 630 aa24.05■■□□□ 1.44
ARC-201ENST00000356613 NACADO15069 1562 aa24■■□□□ 1.43
ARC-201ENST00000356613 SCAF1Q9H7N4 1312 aaKnown RBP23.99■■□□□ 1.43
ARC-201ENST00000356613 CECR2Q9BXF3 1484 aa23.87■■□□□ 1.41
ARC-201ENST00000356613 FAM9AQ8IZU1 332 aaPredicted RBP23.87■■□□□ 1.41
ARC-201ENST00000356613 ZEB1P37275 1124 aaPredicted RBP23.83■■□□□ 1.41
ARC-201ENST00000356613 MROH2BQ7Z745 1585 aa23.83■■□□□ 1.4
ARC-201ENST00000356613 WIZO95785 1651 aa23.73■■□□□ 1.39
ARC-201ENST00000356613 EHMT2Q96KQ7 1210 aa23.64■■□□□ 1.38
ARC-201ENST00000356613 BAZ1AQ9NRL2 1556 aaPredicted RBP23.59■■□□□ 1.37
ARC-201ENST00000356613 EIF4G1Q04637 1599 aaKnown RBP23.58■■□□□ 1.37
ARC-201ENST00000356613 TOP2AP11388 1531 aaKnown RBP23.32■■□□□ 1.32
ARC-201ENST00000356613 ABCC8Q09428 1581 aa23.28■■□□□ 1.32
ARC-201ENST00000356613 SMARCA4P51532 1647 aa23.26■■□□□ 1.31
ARC-201ENST00000356613 UNC13AQ9UPW8 1703 aa23.25■■□□□ 1.31
ARC-201ENST00000356613 CCDC88BA6NC98 1476 aa23.25■■□□□ 1.31
ARC-201ENST00000356613 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.25■■□□□ 1.31
ARC-201ENST00000356613 SMARCA2P51531 1590 aa23.23■■□□□ 1.31
ARC-201ENST00000356613 WRNQ14191 1432 aaPredicted RBP eCLIP23.2■■□□□ 1.3
ARC-201ENST00000356613 CCER1Q8TC90 406 aaPredicted RBP23.15■■□□□ 1.3
ARC-201ENST00000356613 CEP162Q5TB80 1403 aa23.12■■□□□ 1.29
ARC-201ENST00000356613 SOGA1O94964 1423 aa23.11■■□□□ 1.29
ARC-201ENST00000356613 PABPN1Q86U42 306 aaKnown RBP eCLIP23.09■■□□□ 1.29
ARC-201ENST00000356613 TNIKQ9UKE5 1360 aa23.07■■□□□ 1.28
ARC-201ENST00000356613 NEUROD1Q13562 356 aa23.05■■□□□ 1.28
ARC-201ENST00000356613 ACIN1Q9UKV3 1341 aaKnown RBP23.04■■□□□ 1.28
ARC-201ENST00000356613 GTF3C3Q9Y5Q9 886 aa23.02■■□□□ 1.28
ARC-201ENST00000356613 RUSC2Q8N2Y8 1516 aa23.01■■□□□ 1.27
ARC-201ENST00000356613 EEA1Q15075 1411 aa23■■□□□ 1.27
ARC-201ENST00000356613 BICRAQ9NZM4 1560 aa22.98■■□□□ 1.27
ARC-201ENST00000356613 CSRNP3Q8WYN3 585 aa22.96■■□□□ 1.27
ARC-201ENST00000356613 TTBK1Q5TCY1 1321 aaPredicted RBP22.96■■□□□ 1.27
ARC-201ENST00000356613 DIEXFQ68CQ4 756 aaKnown RBP22.89■■□□□ 1.26
ARC-201ENST00000356613 GOLGA3Q08378 1498 aa22.87■■□□□ 1.25
ARC-201ENST00000356613 UBTFP17480 764 aaKnown RBP22.85■■□□□ 1.25
ARC-201ENST00000356613 BCL11AQ9H165 835 aa22.82■■□□□ 1.24
ARC-201ENST00000356613 PEG3Q9GZU2 1588 aa22.81■■□□□ 1.24
ARC-201ENST00000356613 SYNJ1O43426 1573 aa22.75■■□□□ 1.23
ARC-201ENST00000356613 KIF21BO75037 1637 aa22.73■■□□□ 1.23
ARC-201ENST00000356613 CEP164Q9UPV0 1460 aa22.7■■□□□ 1.22
ARC-201ENST00000356613 ATAD2BQ9ULI0 1458 aa22.67■■□□□ 1.22
ARC-201ENST00000356613 CENPBP07199 599 aaPredicted RBP22.67■■□□□ 1.22
ARC-201ENST00000356613 ZNF316A6NFI3 1004 aaPredicted RBP22.67■■□□□ 1.22
ARC-201ENST00000356613 CLIP1P30622 1438 aa22.61■■□□□ 1.21
ARC-201ENST00000356613 BAZ1BQ9UIG0 1483 aaKnown RBP22.61■■□□□ 1.21
ARC-201ENST00000356613 VPS8Q8N3P4 1428 aa22.57■■□□□ 1.2
ARC-201ENST00000356613 PRKCSHP14314 528 aaPredicted RBP22.56■■□□□ 1.2
ARC-201ENST00000356613 HNRNPUL2Q1KMD3 747 aaKnown RBP22.54■■□□□ 1.2
ARC-201ENST00000356613 RAPGEF2Q9Y4G8 1499 aa22.53■■□□□ 1.2
ARC-201ENST00000356613 TOP2BQ02880 1626 aa22.43■■□□□ 1.18
ARC-201ENST00000356613 MIER1Q8N108 512 aa22.4■■□□□ 1.18
ARC-201ENST00000356613 BIVM-ERCC5R4GMW8 1640 aa22.36■■□□□ 1.17
ARC-201ENST00000356613 APLP2Q06481 763 aa22.36■■□□□ 1.17
ARC-201ENST00000356613 YTHDC1Q96MU7 727 aaKnown RBP22.34■■□□□ 1.17
ARC-201ENST00000356613 RANGAP1P46060 587 aaPredicted RBP22.31■■□□□ 1.16
ARC-201ENST00000356613 ERICH3Q5RHP9 1530 aa22.3■■□□□ 1.16
ARC-201ENST00000356613 PRXQ9BXM0 1461 aa22.29■■□□□ 1.16
ARC-201ENST00000356613 ARAP1Q96P48 1450 aa22.27■■□□□ 1.16
ARC-201ENST00000356613 NCAPD3P42695 1498 aa22.23■■□□□ 1.15
ARC-201ENST00000356613 DHX57Q6P158 1386 aaKnown RBP22.21■■□□□ 1.15
ARC-201ENST00000356613 HMGXB3Q12766 1538 aa22.2■■□□□ 1.14
ARC-201ENST00000356613 CLSPNQ9HAW4 1339 aa22.2■■□□□ 1.14
ARC-201ENST00000356613 ANP32EQ9BTT0 268 aa22.19■■□□□ 1.14
ARC-201ENST00000356613 KANK4Q5T7N3 995 aaPredicted RBP22.17■■□□□ 1.14
ARC-201ENST00000356613 CUX1P39880 1505 aa22.16■■□□□ 1.14
ARC-201ENST00000356613 RRBP1Q9P2E9 1410 aaKnown RBP22.11■■□□□ 1.13
ARC-201ENST00000356613 KIF27Q86VH2 1401 aa22.06■■□□□ 1.12
ARC-201ENST00000356613 CUX2O14529 1486 aa22.05■■□□□ 1.12
ARC-201ENST00000356613 CFTRP13569 1480 aa22.05■■□□□ 1.12
ARC-201ENST00000356613 ARHGAP35Q9NRY4 1499 aa22.02■■□□□ 1.12
ARC-201ENST00000356613 CCNB3Q8WWL7 1395 aa21.96■■□□□ 1.11
ARC-201ENST00000356613 PRDM2Q13029 1718 aa21.87■■□□□ 1.09
ARC-201ENST00000356613 IGF1RP08069 1367 aa21.84■■□□□ 1.09
ARC-201ENST00000356613 MAPKBP1O60336 1514 aa21.83■■□□□ 1.09
ARC-201ENST00000356613 TIAM1Q13009 1591 aa21.83■■□□□ 1.08
ARC-201ENST00000356613 MAP3K1Q13233 1512 aa21.83■■□□□ 1.08
ARC-201ENST00000356613 CADPSQ9ULU8 1353 aa21.82■■□□□ 1.08
ARC-201ENST00000356613 RAB3GAP2Q9H2M9 1393 aa21.81■■□□□ 1.08
ARC-201ENST00000356613 ERICH6Q7L0X2 663 aa21.81■■□□□ 1.08
ARC-201ENST00000356613 ITGAEP38570 1179 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms