RNA–Protein interactions for RNA: ENST00000167588.3

KRT20-201, Transcript of keratin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT20, Length 1,737 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20-201ENST00000167588 NISCHQ9Y2I1 1504 aa31.58■■■□□ 2.65
KRT20-201ENST00000167588 CCDC180Q9P1Z9 1646 aa27.12■■□□□ 1.93
KRT20-201ENST00000167588 ZCCHC6Q5VYS8 1495 aaKnown RBP26.79■■□□□ 1.88
KRT20-201ENST00000167588 SHROOM4Q9ULL8 1493 aa26.46■■□□□ 1.83
KRT20-201ENST00000167588 DCAF1Q9Y4B6 1507 aa26.15■■□□□ 1.78
KRT20-201ENST00000167588 SUPT5HO00267 1087 aaKnown RBP25.94■■□□□ 1.74
KRT20-201ENST00000167588 DCAF8L2P0C7V8 631 aa25.54■■□□□ 1.68
KRT20-201ENST00000167588 CHIC1Q5VXU3 224 aa25.46■■□□□ 1.67
KRT20-201ENST00000167588 MYO15BQ96JP2 1530 aa25.42■■□□□ 1.66
KRT20-201ENST00000167588 ABCC9O60706 1549 aa25.34■■□□□ 1.65
KRT20-201ENST00000167588 SCRIBQ14160 1630 aa25.05■■□□□ 1.6
KRT20-201ENST00000167588 NACADO15069 1562 aa24.92■■□□□ 1.58
KRT20-201ENST00000167588 RSF1Q96T23 1441 aaPredicted RBP24.9■■□□□ 1.58
KRT20-201ENST00000167588 RB1CC1Q8TDY2 1594 aa24.8■■□□□ 1.56
KRT20-201ENST00000167588 HRCP23327 699 aa24.78■■□□□ 1.56
KRT20-201ENST00000167588 PCGF6Q9BYE7 350 aa24.52■■□□□ 1.52
KRT20-201ENST00000167588 LOC105371045A0A1W2PR82 267 aa24.49■■□□□ 1.51
KRT20-201ENST00000167588 MROH2BQ7Z745 1585 aa24.45■■□□□ 1.51
KRT20-201ENST00000167588 CECR2Q9BXF3 1484 aa24.44■■□□□ 1.5
KRT20-201ENST00000167588 BAZ1AQ9NRL2 1556 aaPredicted RBP24.39■■□□□ 1.49
KRT20-201ENST00000167588 WIZO95785 1651 aa24.36■■□□□ 1.49
KRT20-201ENST00000167588 TRIM41Q8WV44 630 aa24.31■■□□□ 1.48
KRT20-201ENST00000167588 TRIM26Q12899 539 aaPredicted RBP24.27■■□□□ 1.48
KRT20-201ENST00000167588 EIF4G1Q04637 1599 aaKnown RBP24.27■■□□□ 1.48
KRT20-201ENST00000167588 UNC13AQ9UPW8 1703 aa24.15■■□□□ 1.46
KRT20-201ENST00000167588 TOP2AP11388 1531 aaKnown RBP24.11■■□□□ 1.45
KRT20-201ENST00000167588 SMARCA4P51532 1647 aa24.1■■□□□ 1.45
KRT20-201ENST00000167588 PPARGC1BQ86YN6 1023 aaKnown RBP23.97■■□□□ 1.43
KRT20-201ENST00000167588 SMARCA2P51531 1590 aa23.93■■□□□ 1.42
KRT20-201ENST00000167588 FAM9AQ8IZU1 332 aaPredicted RBP23.9■■□□□ 1.42
KRT20-201ENST00000167588 ZEB1P37275 1124 aaPredicted RBP23.88■■□□□ 1.41
KRT20-201ENST00000167588 CCDC88BA6NC98 1476 aa23.84■■□□□ 1.41
KRT20-201ENST00000167588 PEG3Q9GZU2 1588 aa23.76■■□□□ 1.39
KRT20-201ENST00000167588 BICRAQ9NZM4 1560 aa23.75■■□□□ 1.39
KRT20-201ENST00000167588 ABCC8Q09428 1581 aa23.72■■□□□ 1.39
KRT20-201ENST00000167588 EEA1Q15075 1411 aa23.65■■□□□ 1.38
KRT20-201ENST00000167588 WRNQ14191 1432 aaPredicted RBP eCLIP23.62■■□□□ 1.37
KRT20-201ENST00000167588 EHMT2Q96KQ7 1210 aa23.5■■□□□ 1.35
KRT20-201ENST00000167588 TNIKQ9UKE5 1360 aa23.49■■□□□ 1.35
KRT20-201ENST00000167588 CEP162Q5TB80 1403 aa23.46■■□□□ 1.35
KRT20-201ENST00000167588 SOGA1O94964 1423 aa23.45■■□□□ 1.34
KRT20-201ENST00000167588 GOLGA3Q08378 1498 aa23.38■■□□□ 1.33
KRT20-201ENST00000167588 ATAD2BQ9ULI0 1458 aa23.36■■□□□ 1.33
KRT20-201ENST00000167588 KIF21BO75037 1637 aa23.36■■□□□ 1.33
KRT20-201ENST00000167588 SYNJ1O43426 1573 aa23.34■■□□□ 1.33
KRT20-201ENST00000167588 CSRNP3Q8WYN3 585 aa23.33■■□□□ 1.32
KRT20-201ENST00000167588 RUSC2Q8N2Y8 1516 aa23.32■■□□□ 1.32
KRT20-201ENST00000167588 PABPN1Q86U42 306 aaKnown RBP eCLIP23.3■■□□□ 1.32
KRT20-201ENST00000167588 BAZ1BQ9UIG0 1483 aaKnown RBP23.29■■□□□ 1.32
KRT20-201ENST00000167588 CEP164Q9UPV0 1460 aa23.26■■□□□ 1.31
KRT20-201ENST00000167588 TOP2BQ02880 1626 aa23.15■■□□□ 1.3
KRT20-201ENST00000167588 BIVM-ERCC5R4GMW8 1640 aa23.15■■□□□ 1.3
KRT20-201ENST00000167588 CCER1Q8TC90 406 aaPredicted RBP23.1■■□□□ 1.29
KRT20-201ENST00000167588 HMGXB3Q12766 1538 aa23.09■■□□□ 1.29
KRT20-201ENST00000167588 UBTFP17480 764 aaKnown RBP23.09■■□□□ 1.29
KRT20-201ENST00000167588 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.08■■□□□ 1.29
KRT20-201ENST00000167588 CLIP1P30622 1438 aa23.01■■□□□ 1.27
KRT20-201ENST00000167588 VPS8Q8N3P4 1428 aa22.99■■□□□ 1.27
KRT20-201ENST00000167588 ERICH3Q5RHP9 1530 aa22.98■■□□□ 1.27
KRT20-201ENST00000167588 NCAPD3P42695 1498 aa22.96■■□□□ 1.27
KRT20-201ENST00000167588 RAPGEF2Q9Y4G8 1499 aa22.95■■□□□ 1.26
KRT20-201ENST00000167588 PRDM2Q13029 1718 aa22.9■■□□□ 1.26
KRT20-201ENST00000167588 PRXQ9BXM0 1461 aa22.85■■□□□ 1.25
KRT20-201ENST00000167588 TTBK1Q5TCY1 1321 aaPredicted RBP22.82■■□□□ 1.24
KRT20-201ENST00000167588 CUX1P39880 1505 aa22.81■■□□□ 1.24
KRT20-201ENST00000167588 CFTRP13569 1480 aa22.77■■□□□ 1.24
KRT20-201ENST00000167588 SCAF1Q9H7N4 1312 aaKnown RBP22.72■■□□□ 1.23
KRT20-201ENST00000167588 DIEXFQ68CQ4 756 aaKnown RBP22.71■■□□□ 1.23
KRT20-201ENST00000167588 ARAP1Q96P48 1450 aa22.71■■□□□ 1.23
KRT20-201ENST00000167588 KIF27Q86VH2 1401 aa22.69■■□□□ 1.22
KRT20-201ENST00000167588 APLP2Q06481 763 aa22.66■■□□□ 1.22
KRT20-201ENST00000167588 ZNF316A6NFI3 1004 aaPredicted RBP22.61■■□□□ 1.21
KRT20-201ENST00000167588 ACIN1Q9UKV3 1341 aaKnown RBP22.6■■□□□ 1.21
KRT20-201ENST00000167588 PELP1Q8IZL8 1130 aaKnown RBP22.57■■□□□ 1.2
KRT20-201ENST00000167588 HNRNPUL2Q1KMD3 747 aaKnown RBP22.54■■□□□ 1.2
KRT20-201ENST00000167588 CLSPNQ9HAW4 1339 aa22.52■■□□□ 1.2
KRT20-201ENST00000167588 CENPBP07199 599 aaPredicted RBP22.51■■□□□ 1.19
KRT20-201ENST00000167588 RRBP1Q9P2E9 1410 aaKnown RBP22.51■■□□□ 1.19
KRT20-201ENST00000167588 ARHGAP35Q9NRY4 1499 aa22.48■■□□□ 1.19
KRT20-201ENST00000167588 CUX2O14529 1486 aa22.46■■□□□ 1.19
KRT20-201ENST00000167588 NEUROD1Q13562 356 aa22.46■■□□□ 1.19
KRT20-201ENST00000167588 MAP3K1Q13233 1512 aa22.44■■□□□ 1.18
KRT20-201ENST00000167588 CADPSQ9ULU8 1353 aa22.43■■□□□ 1.18
KRT20-201ENST00000167588 DHX57Q6P158 1386 aaKnown RBP22.38■■□□□ 1.17
KRT20-201ENST00000167588 RANGAP1P46060 587 aaPredicted RBP22.37■■□□□ 1.17
KRT20-201ENST00000167588 FGD5Q6ZNL6 1462 aa22.36■■□□□ 1.17
KRT20-201ENST00000167588 IGF1RP08069 1367 aa22.36■■□□□ 1.17
KRT20-201ENST00000167588 TIAM1Q13009 1591 aa22.35■■□□□ 1.17
KRT20-201ENST00000167588 KANK4Q5T7N3 995 aaPredicted RBP22.34■■□□□ 1.17
KRT20-201ENST00000167588 CFAP43Q8NDM7 1665 aa22.31■■□□□ 1.16
KRT20-201ENST00000167588 CC2D2AQ9P2K1 1620 aa22.3■■□□□ 1.16
KRT20-201ENST00000167588 CCNB3Q8WWL7 1395 aa22.3■■□□□ 1.16
KRT20-201ENST00000167588 DNMBPQ6XZF7 1577 aa22.28■■□□□ 1.16
KRT20-201ENST00000167588 CARMIL1Q5VZK9 1371 aa22.27■■□□□ 1.16
KRT20-201ENST00000167588 FANCD2Q9BXW9 1451 aa22.22■■□□□ 1.15
KRT20-201ENST00000167588 GTF3C3Q9Y5Q9 886 aa22.22■■□□□ 1.15
KRT20-201ENST00000167588 CUL7Q14999 1698 aa22.21■■□□□ 1.15
KRT20-201ENST00000167588 FHAD1B1AJZ9 1412 aa22.2■■□□□ 1.14
KRT20-201ENST00000167588 ABCA10Q8WWZ4 1543 aa22.2■■□□□ 1.14
KRT20-201ENST00000167588 EFCAB5A4FU69 1503 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms