Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 SF3B2-202ENST00000524475 432 ntTSL 314.82□□□□□ -0.045e-17■□□□□ 9.5
RPS3P23396 SF3B2-212ENST00000531589 616 ntTSL 212.66□□□□□ -0.385e-17■□□□□ 9.5
RPS3P23396 SF3B2-213ENST00000533421 407 ntTSL 311.85□□□□□ -0.515e-17■□□□□ 9.5
RPS3P23396 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.178e-7■□□□□ 9.4
RPS3P23396 TNFRSF10B-207ENST00000523504 1464 ntTSL 221.3■■□□□ 18e-7■□□□□ 9.4
RPS3P23396 TNFRSF10B-201ENST00000276431 4146 ntAPPRIS P4 TSL 1 (best) BASIC11.1□□□□□ -0.638e-7■□□□□ 9.4
RPS3P23396 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.34■□□□□ 0.695e-8■□□□□ 9.4
RPS3P23396 ILF3-223ENST00000593061 475 ntTSL 318.55■□□□□ 0.562e-7■□□□□ 9.4
RPS3P23396 ILF3-201ENST00000250241 3035 ntTSL 1 (best) BASIC12.49□□□□□ -0.415e-8■□□□□ 9.4
RPS3P23396 ILF3-202ENST00000407004 3671 ntTSL 1 (best) BASIC11.6□□□□□ -0.555e-8■□□□□ 9.4
RPS3P23396 ILF3-222ENST00000592763 3866 ntTSL 5 BASIC10.56□□□□□ -0.725e-8■□□□□ 9.4
RPS3P23396 TM9SF4-204ENST00000442842 563 ntTSL 413.35□□□□□ -0.277e-8■□□□□ 9.4
RPS3P23396 TM9SF4-205ENST00000450829 550 ntTSL 45.73□□□□□ -1.497e-8■□□□□ 9.4
RPS3P23396 FASN-207ENST00000635197 627 ntTSL 315.31■□□□□ 0.041e-21■□□□□ 9.4
RPS3P23396 UBE2D3-214ENST00000503282 584 ntTSL 221.44■■□□□ 1.025e-12■□□□□ 9.4
RPS3P23396 UBE2D3-216ENST00000503742 1977 ntTSL 1 (best)21.19■□□□□ 0.985e-12■□□□□ 9.4
RPS3P23396 UBE2D3-229ENST00000510129 582 ntTSL 320.76■□□□□ 0.915e-12■□□□□ 9.4
RPS3P23396 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.95e-12■□□□□ 9.4
RPS3P23396 UBE2D3-220ENST00000505307 743 ntTSL 519.2■□□□□ 0.665e-12■□□□□ 9.4
RPS3P23396 UBE2D3-215ENST00000503418 662 ntTSL 418.72■□□□□ 0.595e-12■□□□□ 9.4
RPS3P23396 UBE2D3-213ENST00000502690 599 ntTSL 416.28■□□□□ 0.25e-12■□□□□ 9.4
RPS3P23396 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.025e-12■□□□□ 9.4
RPS3P23396 UBE2D3-228ENST00000508974 568 ntTSL 414.28□□□□□ -0.125e-12■□□□□ 9.4
RPS3P23396 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.275e-12■□□□□ 9.4
RPS3P23396 UBE2D3-209ENST00000394804 4166 ntAPPRIS ALT1 TSL 5 BASIC11.34□□□□□ -0.595e-12■□□□□ 9.4
RPS3P23396 UBE2D3-232ENST00000514755 593 ntTSL 410.71□□□□□ -0.695e-12■□□□□ 9.4
RPS3P23396 UBE2D3-208ENST00000394803 2227 ntAPPRIS ALT1 TSL 1 (best) BASIC9.87□□□□□ -0.835e-12■□□□□ 9.4
RPS3P23396 UBE2D3-227ENST00000508818 584 ntTSL 29.7□□□□□ -0.865e-12■□□□□ 9.4
RPS3P23396 UBE2D3-206ENST00000357194 660 ntTSL 2 BASIC9.67□□□□□ -0.865e-12■□□□□ 9.4
RPS3P23396 UBE2D3-223ENST00000508249 604 ntTSL 48.94□□□□□ -0.985e-12■□□□□ 9.4
RPS3P23396 UBE2D3-202ENST00000338145 896 ntAPPRIS ALT1 TSL 5 BASIC8.59□□□□□ -1.035e-12■□□□□ 9.4
RPS3P23396 UBE2D3-222ENST00000508238 547 ntTSL 47.68□□□□□ -1.185e-12■□□□□ 9.4
RPS3P23396 UBE2D3-204ENST00000349311 838 ntAPPRIS ALT1 TSL 2 BASIC7.31□□□□□ -1.245e-12■□□□□ 9.4
RPS3P23396 CPNE1-223ENST00000475146 627 ntTSL 323.34■■□□□ 1.339e-21■□□□□ 9.4
RPS3P23396 HNF4A-203ENST00000372920 3340 ntTSL 1 (best)17.58■□□□□ 0.43e-7■□□□□ 9.4
RPS3P23396 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC15.22■□□□□ 0.033e-7■□□□□ 9.4
RPS3P23396 HNF4A-204ENST00000415691 2302 ntTSL 1 (best) BASIC12.52□□□□□ -0.413e-7■□□□□ 9.4
RPS3P23396 HNF4A-206ENST00000457232 1339 ntTSL 1 (best) BASIC12.21□□□□□ -0.453e-7■□□□□ 9.4
RPS3P23396 HNF4A-209ENST00000619550 4763 ntTSL 5 BASIC10.76□□□□□ -0.693e-7■□□□□ 9.4
RPS3P23396 HNF4A-201ENST00000316099 6445 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.743e-7■□□□□ 9.4
RPS3P23396 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC22.53■■□□□ 1.28e-7■□□□□ 9.4
RPS3P23396 QKI-204ENST00000361758 6085 ntTSL 521.9■■□□□ 1.18e-7■□□□□ 9.4
RPS3P23396 MICALL2-204ENST00000467394 2080 ntTSL 219.84■□□□□ 0.772e-6■□□□□ 9.4
RPS3P23396 MICALL2-209ENST00000479007 1855 ntTSL 219.47■□□□□ 0.712e-6■□□□□ 9.4
RPS3P23396 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.79■□□□□ 0.68e-7■□□□□ 9.4
RPS3P23396 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.58e-7■□□□□ 9.4
RPS3P23396 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.02■□□□□ 0.488e-7■□□□□ 9.4
RPS3P23396 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.422e-6■□□□□ 9.4
RPS3P23396 MICALL2-205ENST00000467783 639 ntTSL 317.35■□□□□ 0.372e-6■□□□□ 9.4
RPS3P23396 MICALL2-208ENST00000472100 5248 ntTSL 217.29■□□□□ 0.362e-6■□□□□ 9.4
RPS3P23396 MICALL2-215ENST00000496184 2722 ntTSL 216.94■□□□□ 0.32e-6■□□□□ 9.4
RPS3P23396 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.292e-6■□□□□ 9.4
RPS3P23396 MICALL2-206ENST00000470807 668 ntTSL 316.61■□□□□ 0.252e-6■□□□□ 9.4
RPS3P23396 KMT5A-209ENST00000537270 352 ntTSL 516.53■□□□□ 0.242e-6■□□□□ 9.4
RPS3P23396 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.122e-6■□□□□ 9.4
RPS3P23396 MICALL2-207ENST00000471899 899 ntTSL 215.16■□□□□ 0.022e-6■□□□□ 9.4
RPS3P23396 MICALL2-202ENST00000413446 3046 ntTSL 213.21□□□□□ -0.292e-6■□□□□ 9.4
RPS3P23396 KMT5A-204ENST00000437519 1774 ntTSL 212.76□□□□□ -0.372e-6■□□□□ 9.4
RPS3P23396 CPSF1-204ENST00000529288 588 ntTSL 212.44□□□□□ -0.422e-6■□□□□ 9.4
RPS3P23396 MICALL2-214ENST00000493998 404 ntTSL 212.39□□□□□ -0.432e-6■□□□□ 9.4
RPS3P23396 QKI-210ENST00000537883 1106 ntTSL 38.44□□□□□ -1.062e-6■□□□□ 9.4
RPS3P23396 PRKAB1-204ENST00000538271 567 ntTSL 48.2□□□□□ -1.12e-6■□□□□ 9.4
RPS3P23396 QKI-212ENST00000541696 1097 ntTSL 26.79□□□□□ -1.322e-6■□□□□ 9.4
RPS3P23396 QKI-217ENST00000545607 846 ntTSL 54.39□□□□□ -1.712e-6■□□□□ 9.4
RPS3P23396 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.15□□□□□ -1.912e-6■□□□□ 9.4
RPS3P23396 QKI-213ENST00000544361 613 ntTSL 53.15□□□□□ -1.912e-6■□□□□ 9.4
RPS3P23396 DLGAP5-205ENST00000557645 808 ntTSL 31.27□□□□□ -2.212e-6■□□□□ 9.4
RPS3P23396 SND1-205ENST00000467238 716 ntTSL 36.75□□□□□ -1.331e-13■□□□□ 9.4
RPS3P23396 PSME2-214ENST00000560592 760 ntTSL 211.06□□□□□ -0.648e-7■□□□□ 9.4
RPS3P23396 PSME2-215ENST00000560788 785 ntTSL 211.06□□□□□ -0.648e-7■□□□□ 9.4
RPS3P23396 PSME2-210ENST00000559493 702 ntTSL 25.25□□□□□ -1.578e-7■□□□□ 9.4
RPS3P23396 DAG1-206ENST00000430636 397 ntTSL 420.41■□□□□ 0.862e-8■□□□□ 9.4
RPS3P23396 DAG1-203ENST00000419218 562 ntTSL 218.77■□□□□ 0.62e-8■□□□□ 9.4
RPS3P23396 DAG1-214ENST00000469139 561 ntTSL 410.52□□□□□ -0.732e-8■□□□□ 9.4
RPS3P23396 A2M-210ENST00000542567 563 ntTSL 46.75□□□□□ -1.333e-38■□□□□ 9.4
RPS3P23396 MTX2-204ENST00000443241 799 ntTSL 3 BASIC23.19■■□□□ 1.32e-6■□□□□ 9.4
RPS3P23396 MTX2-205ENST00000452865 817 ntTSL 323.19■■□□□ 1.32e-6■□□□□ 9.4
RPS3P23396 MTX2-203ENST00000423461 618 ntTSL 322.62■■□□□ 1.212e-6■□□□□ 9.4
RPS3P23396 MTX2-202ENST00000420864 1592 ntTSL 1 (best)21.98■■□□□ 1.112e-6■□□□□ 9.4
RPS3P23396 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.972e-6■□□□□ 9.4
RPS3P23396 SFXN1-209ENST00000508290 592 ntTSL 419.36■□□□□ 0.692e-6■□□□□ 9.4
RPS3P23396 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC18.99■□□□□ 0.632e-6■□□□□ 9.4
RPS3P23396 SFXN1-207ENST00000507395 527 ntTSL 217.06■□□□□ 0.322e-6■□□□□ 9.4
RPS3P23396 SFXN1-212ENST00000515791 569 ntTSL 417.06■□□□□ 0.322e-6■□□□□ 9.4
RPS3P23396 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17■□□□□ 0.313e-6■□□□□ 9.4
RPS3P23396 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15.81■□□□□ 0.125e-12■□□□□ 9.4
RPS3P23396 DEK-201ENST00000244776 1441 ntTSL 2 BASIC15.52■□□□□ 0.083e-23■□□□□ 9.4
RPS3P23396 LTBP4-226ENST00000599724 910 ntTSL 515.28■□□□□ 0.042e-6■□□□□ 9.4
RPS3P23396 LTBP4-217ENST00000597151 285 ntTSL 214.67□□□□□ -0.062e-6■□□□□ 9.4
RPS3P23396 DEK-204ENST00000505224 1372 ntTSL 213.85□□□□□ -0.193e-23■□□□□ 9.4
RPS3P23396 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.253e-23■□□□□ 9.4
RPS3P23396 DEK-203ENST00000503715 580 ntTSL 512.91□□□□□ -0.343e-23■□□□□ 9.4
RPS3P23396 CHEK1-203ENST00000428830 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.363e-6■□□□□ 9.4
RPS3P23396 CHEK1-201ENST00000278916 1712 ntTSL 5 BASIC11.53□□□□□ -0.563e-6■□□□□ 9.4
RPS3P23396 CHEK1-204ENST00000438015 4153 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.73e-6■□□□□ 9.4
RPS3P23396 SPAG5-203ENST00000536674 870 ntTSL 310.57□□□□□ -0.722e-6■□□□□ 9.4
RPS3P23396 SFXN1-210ENST00000513725 597 ntTSL 210.55□□□□□ -0.722e-6■□□□□ 9.4
RPS3P23396 CHEK1-213ENST00000532449 4051 ntTSL 2 BASIC10.46□□□□□ -0.733e-6■□□□□ 9.4
RPS3P23396 CHEK1-218ENST00000544373 1653 ntTSL 1 (best) BASIC10.33□□□□□ -0.763e-6■□□□□ 9.4
RPS3P23396 CHEK1-206ENST00000524737 1799 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.793e-6■□□□□ 9.4
Retrieved 100 of 24,271 protein–RNA pairs in 412.9 ms