RNA–Protein interactions for RNA: ENST00000428830.6

CHEK1-203, Transcript of checkpoint kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHEK1, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-203ENST00000428830 NISCHQ9Y2I1 1504 aa29.85■■■□□ 2.37
CHEK1-203ENST00000428830 CCDC180Q9P1Z9 1646 aa26.2■■□□□ 1.78
CHEK1-203ENST00000428830 ZCCHC6Q5VYS8 1495 aaKnown RBP25.04■■□□□ 1.6
CHEK1-203ENST00000428830 ABCC9O60706 1549 aa24.92■■□□□ 1.58
CHEK1-203ENST00000428830 DCAF1Q9Y4B6 1507 aa24.72■■□□□ 1.55
CHEK1-203ENST00000428830 DCAF8L2P0C7V8 631 aa24.68■■□□□ 1.54
CHEK1-203ENST00000428830 MYO15BQ96JP2 1530 aa24.53■■□□□ 1.52
CHEK1-203ENST00000428830 NACADO15069 1562 aa24.44■■□□□ 1.5
CHEK1-203ENST00000428830 RB1CC1Q8TDY2 1594 aa24.29■■□□□ 1.48
CHEK1-203ENST00000428830 SHROOM4Q9ULL8 1493 aa24.11■■□□□ 1.45
CHEK1-203ENST00000428830 SCRIBQ14160 1630 aa24■■□□□ 1.43
CHEK1-203ENST00000428830 UNC13AQ9UPW8 1703 aa23.79■■□□□ 1.4
CHEK1-203ENST00000428830 BICRAQ9NZM4 1560 aa23.53■■□□□ 1.36
CHEK1-203ENST00000428830 PABPN1Q86U42 306 aaKnown RBP eCLIP23.42■■□□□ 1.34
CHEK1-203ENST00000428830 CECR2Q9BXF3 1484 aa23.18■■□□□ 1.3
CHEK1-203ENST00000428830 BAZ1AQ9NRL2 1556 aaPredicted RBP23.09■■□□□ 1.29
CHEK1-203ENST00000428830 SUPT5HO00267 1087 aaKnown RBP23.08■■□□□ 1.29
CHEK1-203ENST00000428830 RSF1Q96T23 1441 aaPredicted RBP23.05■■□□□ 1.28
CHEK1-203ENST00000428830 MROH2BQ7Z745 1585 aa23.04■■□□□ 1.28
CHEK1-203ENST00000428830 SMARCA4P51532 1647 aa23.01■■□□□ 1.27
CHEK1-203ENST00000428830 EIF4G1Q04637 1599 aaKnown RBP22.86■■□□□ 1.25
CHEK1-203ENST00000428830 WIZO95785 1651 aa22.84■■□□□ 1.25
CHEK1-203ENST00000428830 PEG3Q9GZU2 1588 aa22.76■■□□□ 1.23
CHEK1-203ENST00000428830 SMARCA2P51531 1590 aa22.7■■□□□ 1.22
CHEK1-203ENST00000428830 ATAD2BQ9ULI0 1458 aa22.68■■□□□ 1.22
CHEK1-203ENST00000428830 TOP2AP11388 1531 aaKnown RBP22.62■■□□□ 1.21
CHEK1-203ENST00000428830 CC2D2AQ9P2K1 1620 aa22.57■■□□□ 1.2
CHEK1-203ENST00000428830 BAZ1BQ9UIG0 1483 aaKnown RBP22.55■■□□□ 1.2
CHEK1-203ENST00000428830 NCAPD3P42695 1498 aa22.54■■□□□ 1.2
CHEK1-203ENST00000428830 HMGXB3Q12766 1538 aa22.51■■□□□ 1.19
CHEK1-203ENST00000428830 CCDC88BA6NC98 1476 aa22.35■■□□□ 1.17
CHEK1-203ENST00000428830 DNAJC5BQ9UF47 199 aa22.16■■□□□ 1.14
CHEK1-203ENST00000428830 CHIC1Q5VXU3 224 aa21.97■■□□□ 1.11
CHEK1-203ENST00000428830 CFTRP13569 1480 aa21.97■■□□□ 1.11
CHEK1-203ENST00000428830 CADPSQ9ULU8 1353 aa21.94■■□□□ 1.1
CHEK1-203ENST00000428830 PRDM2Q13029 1718 aa21.89■■□□□ 1.09
CHEK1-203ENST00000428830 LAMC3Q9Y6N6 1575 aa21.83■■□□□ 1.09
CHEK1-203ENST00000428830 ABCC8Q09428 1581 aa21.8■■□□□ 1.08
CHEK1-203ENST00000428830 NESP48681 1621 aa21.79■■□□□ 1.08
CHEK1-203ENST00000428830 TRIM41Q8WV44 630 aa21.76■■□□□ 1.07
CHEK1-203ENST00000428830 WRNQ14191 1432 aaPredicted RBP eCLIP21.72■■□□□ 1.07
CHEK1-203ENST00000428830 FANCD2Q9BXW9 1451 aa21.69■■□□□ 1.06
CHEK1-203ENST00000428830 PDS5BQ9NTI5 1447 aa21.66■■□□□ 1.06
CHEK1-203ENST00000428830 SYNJ1O43426 1573 aa21.63■■□□□ 1.05
CHEK1-203ENST00000428830 CEP164Q9UPV0 1460 aa21.6■■□□□ 1.05
CHEK1-203ENST00000428830 TOP2BQ02880 1626 aa21.59■■□□□ 1.05
CHEK1-203ENST00000428830 BIVM-ERCC5R4GMW8 1640 aa21.57■■□□□ 1.04
CHEK1-203ENST00000428830 KIF21AQ7Z4S6 1674 aa21.57■■□□□ 1.04
CHEK1-203ENST00000428830 CUX1P39880 1505 aa21.57■■□□□ 1.04
CHEK1-203ENST00000428830 DNMBPQ6XZF7 1577 aa21.47■■□□□ 1.03
CHEK1-203ENST00000428830 URB2Q14146 1524 aaKnown RBP21.43■■□□□ 1.02
CHEK1-203ENST00000428830 TOPBP1Q92547 1522 aa21.43■■□□□ 1.02
CHEK1-203ENST00000428830 ERCC6Q03468 1493 aa21.42■■□□□ 1.02
CHEK1-203ENST00000428830 MRC2Q9UBG0 1479 aa21.38■■□□□ 1.01
CHEK1-203ENST00000428830 FGD5Q6ZNL6 1462 aa21.37■■□□□ 1.01
CHEK1-203ENST00000428830 SOGA1O94964 1423 aa21.33■■□□□ 1
CHEK1-203ENST00000428830 POLA1P09884 1462 aaPredicted RBP21.31■■□□□ 1
CHEK1-203ENST00000428830 FAM9AQ8IZU1 332 aaPredicted RBP21.3■■□□□ 1
CHEK1-203ENST00000428830 WDR62O43379 1518 aa21.3■■□□□ 1
CHEK1-203ENST00000428830 EEA1Q15075 1411 aa21.29■■□□□ 1
CHEK1-203ENST00000428830 THOC2Q8NI27 1593 aaKnown RBP21.28■■□□□ 1
CHEK1-203ENST00000428830 RUSC2Q8N2Y8 1516 aa21.26■□□□□ 0.99
CHEK1-203ENST00000428830 RAD54L2Q9Y4B4 1467 aa21.21■□□□□ 0.99
CHEK1-203ENST00000428830 KIF27Q86VH2 1401 aa21.2■□□□□ 0.98
CHEK1-203ENST00000428830 ABCA10Q8WWZ4 1543 aa21.19■□□□□ 0.98
CHEK1-203ENST00000428830 CUX2O14529 1486 aa21.18■□□□□ 0.98
CHEK1-203ENST00000428830 CSRNP3Q8WYN3 585 aa21.15■□□□□ 0.98
CHEK1-203ENST00000428830 WDR97A6NE52 1622 aa21.15■□□□□ 0.98
CHEK1-203ENST00000428830 TARBP1Q13395 1621 aaKnown RBP21.14■□□□□ 0.98
CHEK1-203ENST00000428830 IFT140Q96RY7 1462 aa21.09■□□□□ 0.97
CHEK1-203ENST00000428830 LOC105371045A0A1W2PR82 267 aa21.09■□□□□ 0.97
CHEK1-203ENST00000428830 ABCA5Q8WWZ7 1642 aa21.05■□□□□ 0.96
CHEK1-203ENST00000428830 TDRD9Q8NDG6 1382 aaKnown RBP21.03■□□□□ 0.96
CHEK1-203ENST00000428830 KIF21BO75037 1637 aa21.03■□□□□ 0.96
CHEK1-203ENST00000428830 IGF1RP08069 1367 aa21.01■□□□□ 0.95
CHEK1-203ENST00000428830 GAPVD1Q14C86 1478 aa21■□□□□ 0.95
CHEK1-203ENST00000428830 EHMT2Q96KQ7 1210 aa20.99■□□□□ 0.95
CHEK1-203ENST00000428830 PRXQ9BXM0 1461 aa20.99■□□□□ 0.95
CHEK1-203ENST00000428830 GOLGA3Q08378 1498 aa20.97■□□□□ 0.95
CHEK1-203ENST00000428830 ZNF608Q9ULD9 1512 aaPredicted RBP20.96■□□□□ 0.95
CHEK1-203ENST00000428830 ERICH3Q5RHP9 1530 aa20.95■□□□□ 0.94
CHEK1-203ENST00000428830 AQRO60306 1485 aaKnown RBP eCLIP20.94■□□□□ 0.945e-8■■■■■ 34.4
CHEK1-203ENST00000428830 RAPGEF2Q9Y4G8 1499 aa20.93■□□□□ 0.94
CHEK1-203ENST00000428830 CUL7Q14999 1698 aa20.92■□□□□ 0.94
CHEK1-203ENST00000428830 PBRM1Q86U86 1689 aa20.92■□□□□ 0.94
CHEK1-203ENST00000428830 EIF4G3O43432 1585 aaKnown RBP20.91■□□□□ 0.94
CHEK1-203ENST00000428830 CARMIL1Q5VZK9 1371 aa20.91■□□□□ 0.94
CHEK1-203ENST00000428830 GRIN2BQ13224 1484 aa20.88■□□□□ 0.93
CHEK1-203ENST00000428830 UBTFP17480 764 aaKnown RBP20.86■□□□□ 0.93
CHEK1-203ENST00000428830 TNIKQ9UKE5 1360 aa20.84■□□□□ 0.93
CHEK1-203ENST00000428830 ADAMTS12P58397 1594 aa20.79■□□□□ 0.92
CHEK1-203ENST00000428830 FHAD1B1AJZ9 1412 aa20.77■□□□□ 0.92
CHEK1-203ENST00000428830 SNAPC4Q5SXM2 1469 aa20.76■□□□□ 0.91
CHEK1-203ENST00000428830 MAGI1Q96QZ7 1491 aaPredicted RBP20.75■□□□□ 0.91
CHEK1-203ENST00000428830 CEP162Q5TB80 1403 aa20.72■□□□□ 0.91
CHEK1-203ENST00000428830 SYNJ2O15056 1496 aa20.66■□□□□ 0.9
CHEK1-203ENST00000428830 CTTNBP2Q8WZ74 1663 aa20.65■□□□□ 0.9
CHEK1-203ENST00000428830 GRIN2AQ12879 1464 aa20.62■□□□□ 0.89
CHEK1-203ENST00000428830 CLIP1P30622 1438 aa20.62■□□□□ 0.89
CHEK1-203ENST00000428830 CHMP7Q8WUX9 453 aaPredicted RBP20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms