RNA–Protein interactions for RNA: ENST00000544373.5

CHEK1-218, Transcript of checkpoint kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CHEK1, Length 1,653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-218ENST00000544373 NISCHQ9Y2I1 1504 aa26.45■■□□□ 1.82
CHEK1-218ENST00000544373 CCDC180Q9P1Z9 1646 aa23.51■■□□□ 1.35
CHEK1-218ENST00000544373 ABCC9O60706 1549 aa23.45■■□□□ 1.34
CHEK1-218ENST00000544373 AEBP2Q6ZN18 517 aaPredicted RBP22.84■■□□□ 1.25
CHEK1-218ENST00000544373 DCAF8L2P0C7V8 631 aa22.33■■□□□ 1.17
CHEK1-218ENST00000544373 RB1CC1Q8TDY2 1594 aa22.31■■□□□ 1.16
CHEK1-218ENST00000544373 NACADO15069 1562 aa22.23■■□□□ 1.15
CHEK1-218ENST00000544373 MYO15BQ96JP2 1530 aa21.99■■□□□ 1.11
CHEK1-218ENST00000544373 ZCCHC6Q5VYS8 1495 aaKnown RBP21.96■■□□□ 1.11
CHEK1-218ENST00000544373 PABPN1Q86U42 306 aaKnown RBP eCLIP21.95■■□□□ 1.1
CHEK1-218ENST00000544373 DNAJC5BQ9UF47 199 aa21.88■■□□□ 1.09
CHEK1-218ENST00000544373 DCAF1Q9Y4B6 1507 aa21.81■■□□□ 1.08
CHEK1-218ENST00000544373 UNC13AQ9UPW8 1703 aa21.77■■□□□ 1.08
CHEK1-218ENST00000544373 BICRAQ9NZM4 1560 aa21.72■■□□□ 1.07
CHEK1-218ENST00000544373 CHIC1Q5VXU3 224 aa21.67■■□□□ 1.06
CHEK1-218ENST00000544373 SCRIBQ14160 1630 aa21.54■■□□□ 1.04
CHEK1-218ENST00000544373 SHROOM4Q9ULL8 1493 aa21.36■■□□□ 1.01
CHEK1-218ENST00000544373 EIF4G1Q04637 1599 aaKnown RBP21.15■□□□□ 0.98
CHEK1-218ENST00000544373 CC2D2AQ9P2K1 1620 aa21.13■□□□□ 0.97
CHEK1-218ENST00000544373 CECR2Q9BXF3 1484 aa21.08■□□□□ 0.96
CHEK1-218ENST00000544373 NCAPD3P42695 1498 aa20.58■□□□□ 0.88
CHEK1-218ENST00000544373 ATAD2BQ9ULI0 1458 aa20.56■□□□□ 0.88
CHEK1-218ENST00000544373 SMARCA4P51532 1647 aa20.55■□□□□ 0.88
CHEK1-218ENST00000544373 BAZ1AQ9NRL2 1556 aaPredicted RBP20.48■□□□□ 0.87
CHEK1-218ENST00000544373 SMARCA2P51531 1590 aa20.45■□□□□ 0.86
CHEK1-218ENST00000544373 MROH2BQ7Z745 1585 aa20.41■□□□□ 0.86
CHEK1-218ENST00000544373 HMGXB3Q12766 1538 aa20.39■□□□□ 0.85
CHEK1-218ENST00000544373 BAZ1BQ9UIG0 1483 aaKnown RBP20.34■□□□□ 0.85
CHEK1-218ENST00000544373 PEG3Q9GZU2 1588 aa20.33■□□□□ 0.85
CHEK1-218ENST00000544373 NESP48681 1621 aa20.22■□□□□ 0.83
CHEK1-218ENST00000544373 ERCC6Q03468 1493 aa20.18■□□□□ 0.82
CHEK1-218ENST00000544373 WIZO95785 1651 aa20.14■□□□□ 0.81
CHEK1-218ENST00000544373 RSF1Q96T23 1441 aaPredicted RBP20.1■□□□□ 0.81
CHEK1-218ENST00000544373 CUX2O14529 1486 aa20.03■□□□□ 0.8
CHEK1-218ENST00000544373 LAMC3Q9Y6N6 1575 aa20■□□□□ 0.79
CHEK1-218ENST00000544373 CADPSQ9ULU8 1353 aa19.99■□□□□ 0.79
CHEK1-218ENST00000544373 PDS5BQ9NTI5 1447 aa19.93■□□□□ 0.78
CHEK1-218ENST00000544373 TOP2AP11388 1531 aaKnown RBP19.89■□□□□ 0.77
CHEK1-218ENST00000544373 THOC2Q8NI27 1593 aaKnown RBP19.87■□□□□ 0.77
CHEK1-218ENST00000544373 KIF21AQ7Z4S6 1674 aa19.86■□□□□ 0.77
CHEK1-218ENST00000544373 DNAJC5Q9H3Z4 198 aa19.85■□□□□ 0.77
CHEK1-218ENST00000544373 CFTRP13569 1480 aa19.79■□□□□ 0.76
CHEK1-218ENST00000544373 MRC2Q9UBG0 1479 aa19.75■□□□□ 0.75
CHEK1-218ENST00000544373 FANCD2Q9BXW9 1451 aa19.74■□□□□ 0.75
CHEK1-218ENST00000544373 CCDC88BA6NC98 1476 aa19.73■□□□□ 0.75
CHEK1-218ENST00000544373 CEP164Q9UPV0 1460 aa19.71■□□□□ 0.75
CHEK1-218ENST00000544373 WDR62O43379 1518 aa19.68■□□□□ 0.74
CHEK1-218ENST00000544373 URB2Q14146 1524 aaKnown RBP19.58■□□□□ 0.72
CHEK1-218ENST00000544373 SENP3Q9H4L4 574 aaPredicted RBP19.52■□□□□ 0.72
CHEK1-218ENST00000544373 SUPT5HO00267 1087 aaKnown RBP19.45■□□□□ 0.7
CHEK1-218ENST00000544373 PRDM2Q13029 1718 aa19.43■□□□□ 0.7
CHEK1-218ENST00000544373 TOPBP1Q92547 1522 aa19.39■□□□□ 0.69
CHEK1-218ENST00000544373 ZNF608Q9ULD9 1512 aaPredicted RBP19.32■□□□□ 0.68
CHEK1-218ENST00000544373 IFT140Q96RY7 1462 aa19.31■□□□□ 0.68
CHEK1-218ENST00000544373 ABCC8Q09428 1581 aa19.3■□□□□ 0.68
CHEK1-218ENST00000544373 DNMBPQ6XZF7 1577 aa19.29■□□□□ 0.68
CHEK1-218ENST00000544373 PHF23Q9BUL5 403 aaPredicted RBP19.25■□□□□ 0.67
CHEK1-218ENST00000544373 OSCARQ8IYS5 282 aa19.24■□□□□ 0.67
CHEK1-218ENST00000544373 POLA1P09884 1462 aaPredicted RBP19.22■□□□□ 0.67
CHEK1-218ENST00000544373 AQRO60306 1485 aaKnown RBP eCLIP19.19■□□□□ 0.665e-8■■■■■ 34.4
CHEK1-218ENST00000544373 RAD54L2Q9Y4B4 1467 aa19.19■□□□□ 0.66
CHEK1-218ENST00000544373 TARBP1Q13395 1621 aaKnown RBP19.17■□□□□ 0.66
CHEK1-218ENST00000544373 SOGA1O94964 1423 aa19.15■□□□□ 0.66
CHEK1-218ENST00000544373 CUX1P39880 1505 aa19.15■□□□□ 0.66
CHEK1-218ENST00000544373 EIF4G3O43432 1585 aaKnown RBP19.14■□□□□ 0.65
CHEK1-218ENST00000544373 TDRD9Q8NDG6 1382 aaKnown RBP19.13■□□□□ 0.65
CHEK1-218ENST00000544373 FGD5Q6ZNL6 1462 aa19.13■□□□□ 0.65
CHEK1-218ENST00000544373 TRIM41Q8WV44 630 aa19.1■□□□□ 0.65
CHEK1-218ENST00000544373 FBLN2P98095 1184 aa19.03■□□□□ 0.64
CHEK1-218ENST00000544373 SNAPC4Q5SXM2 1469 aa18.95■□□□□ 0.62
CHEK1-218ENST00000544373 WRNQ14191 1432 aaPredicted RBP eCLIP18.93■□□□□ 0.62
CHEK1-218ENST00000544373 GRIN2BQ13224 1484 aa18.92■□□□□ 0.62
CHEK1-218ENST00000544373 CHD1O14646 1710 aa18.92■□□□□ 0.62
CHEK1-218ENST00000544373 ABCA10Q8WWZ4 1543 aa18.91■□□□□ 0.62
CHEK1-218ENST00000544373 WDR97A6NE52 1622 aa18.9■□□□□ 0.62
CHEK1-218ENST00000544373 CHMP7Q8WUX9 453 aaPredicted RBP18.9■□□□□ 0.62
CHEK1-218ENST00000544373 GAPVD1Q14C86 1478 aa18.9■□□□□ 0.62
CHEK1-218ENST00000544373 RIMBP3CA6NJZ7 1639 aa18.89■□□□□ 0.61
CHEK1-218ENST00000544373 RIMBP3BA6NNM3 1639 aa18.89■□□□□ 0.61
CHEK1-218ENST00000544373 RIMBP3Q9UFD9 1639 aa18.89■□□□□ 0.61
CHEK1-218ENST00000544373 ARHGEF11O15085 1522 aa18.89■□□□□ 0.61
CHEK1-218ENST00000544373 SYNJ1O43426 1573 aa18.89■□□□□ 0.61
CHEK1-218ENST00000544373 MAGI1Q96QZ7 1491 aaPredicted RBP18.87■□□□□ 0.61
CHEK1-218ENST00000544373 TOP2BQ02880 1626 aa18.86■□□□□ 0.61
CHEK1-218ENST00000544373 BIVM-ERCC5R4GMW8 1640 aa18.83■□□□□ 0.6
CHEK1-218ENST00000544373 SYNJ2O15056 1496 aa18.82■□□□□ 0.6
CHEK1-218ENST00000544373 ABCA5Q8WWZ7 1642 aa18.82■□□□□ 0.6
CHEK1-218ENST00000544373 CYB5RLQ6IPT4 315 aa18.81■□□□□ 0.6
CHEK1-218ENST00000544373 PBRM1Q86U86 1689 aa18.77■□□□□ 0.6
CHEK1-218ENST00000544373 CLASP1Q7Z460 1538 aa18.75■□□□□ 0.59
CHEK1-218ENST00000544373 ARAP1Q96P48 1450 aa18.73■□□□□ 0.59
CHEK1-218ENST00000544373 GRIN2AQ12879 1464 aa18.68■□□□□ 0.58
CHEK1-218ENST00000544373 FHAD1B1AJZ9 1412 aa18.67■□□□□ 0.58
CHEK1-218ENST00000544373 ADAMTS12P58397 1594 aa18.66■□□□□ 0.58
CHEK1-218ENST00000544373 ERICH3Q5RHP9 1530 aa18.65■□□□□ 0.58
CHEK1-218ENST00000544373 NUP160Q12769 1436 aa18.61■□□□□ 0.57
CHEK1-218ENST00000544373 CEP170Q5SW79 1584 aa18.6■□□□□ 0.57
CHEK1-218ENST00000544373 IGF1RP08069 1367 aa18.57■□□□□ 0.56
CHEK1-218ENST00000544373 ERCC6L2Q5T890 1561 aa18.55■□□□□ 0.56
CHEK1-218ENST00000544373 KIF27Q86VH2 1401 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 115.1 ms