RNA–Protein interactions for RNA: ENST00000278916.7

CHEK1-201, Transcript of checkpoint kinase 1, humanhuman

TSL 5 BASIC

Gene CHEK1, Length 1,712 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-201ENST00000278916 NISCHQ9Y2I1 1504 aa28.31■■■□□ 2.12
CHEK1-201ENST00000278916 CCDC180Q9P1Z9 1646 aa25.02■■□□□ 1.6
CHEK1-201ENST00000278916 ABCC9O60706 1549 aa24.49■■□□□ 1.51
CHEK1-201ENST00000278916 DCAF8L2P0C7V8 631 aa23.76■■□□□ 1.39
CHEK1-201ENST00000278916 ZCCHC6Q5VYS8 1495 aaKnown RBP23.61■■□□□ 1.37
CHEK1-201ENST00000278916 RB1CC1Q8TDY2 1594 aa23.5■■□□□ 1.35
CHEK1-201ENST00000278916 NACADO15069 1562 aa23.48■■□□□ 1.35
CHEK1-201ENST00000278916 MYO15BQ96JP2 1530 aa23.32■■□□□ 1.32
CHEK1-201ENST00000278916 DCAF1Q9Y4B6 1507 aa23.32■■□□□ 1.32
CHEK1-201ENST00000278916 UNC13AQ9UPW8 1703 aa23.05■■□□□ 1.28
CHEK1-201ENST00000278916 SCRIBQ14160 1630 aa23.01■■□□□ 1.27
CHEK1-201ENST00000278916 PABPN1Q86U42 306 aaKnown RBP eCLIP22.96■■□□□ 1.27
CHEK1-201ENST00000278916 BICRAQ9NZM4 1560 aa22.84■■□□□ 1.25
CHEK1-201ENST00000278916 SHROOM4Q9ULL8 1493 aa22.68■■□□□ 1.22
CHEK1-201ENST00000278916 DNAJC5BQ9UF47 199 aa22.34■■□□□ 1.17
CHEK1-201ENST00000278916 EIF4G1Q04637 1599 aaKnown RBP22.22■■□□□ 1.15
CHEK1-201ENST00000278916 CECR2Q9BXF3 1484 aa22.13■■□□□ 1.13
CHEK1-201ENST00000278916 CC2D2AQ9P2K1 1620 aa22.11■■□□□ 1.13
CHEK1-201ENST00000278916 SMARCA4P51532 1647 aa21.94■■□□□ 1.1
CHEK1-201ENST00000278916 BAZ1AQ9NRL2 1556 aaPredicted RBP21.9■■□□□ 1.1
CHEK1-201ENST00000278916 MROH2BQ7Z745 1585 aa21.89■■□□□ 1.09
CHEK1-201ENST00000278916 ATAD2BQ9ULI0 1458 aa21.77■■□□□ 1.08
CHEK1-201ENST00000278916 SMARCA2P51531 1590 aa21.7■■□□□ 1.06
CHEK1-201ENST00000278916 WIZO95785 1651 aa21.68■■□□□ 1.06
CHEK1-201ENST00000278916 NCAPD3P42695 1498 aa21.68■■□□□ 1.06
CHEK1-201ENST00000278916 RSF1Q96T23 1441 aaPredicted RBP21.67■■□□□ 1.06
CHEK1-201ENST00000278916 PEG3Q9GZU2 1588 aa21.64■■□□□ 1.06
CHEK1-201ENST00000278916 BAZ1BQ9UIG0 1483 aaKnown RBP21.61■■□□□ 1.05
CHEK1-201ENST00000278916 HMGXB3Q12766 1538 aa21.59■■□□□ 1.05
CHEK1-201ENST00000278916 SUPT5HO00267 1087 aaKnown RBP21.38■■□□□ 1.01
CHEK1-201ENST00000278916 TOP2AP11388 1531 aaKnown RBP21.38■■□□□ 1.01
CHEK1-201ENST00000278916 NESP48681 1621 aa21.26■□□□□ 0.99
CHEK1-201ENST00000278916 CCDC88BA6NC98 1476 aa21.17■□□□□ 0.98
CHEK1-201ENST00000278916 CADPSQ9ULU8 1353 aa21.1■□□□□ 0.97
CHEK1-201ENST00000278916 LAMC3Q9Y6N6 1575 aa21.09■□□□□ 0.97
CHEK1-201ENST00000278916 ERCC6Q03468 1493 aa21.05■□□□□ 0.96
CHEK1-201ENST00000278916 CFTRP13569 1480 aa20.99■□□□□ 0.95
CHEK1-201ENST00000278916 KIF21AQ7Z4S6 1674 aa20.97■□□□□ 0.95
CHEK1-201ENST00000278916 PDS5BQ9NTI5 1447 aa20.94■□□□□ 0.94
CHEK1-201ENST00000278916 FANCD2Q9BXW9 1451 aa20.89■□□□□ 0.93
CHEK1-201ENST00000278916 PRDM2Q13029 1718 aa20.84■□□□□ 0.93
CHEK1-201ENST00000278916 CEP164Q9UPV0 1460 aa20.83■□□□□ 0.92
CHEK1-201ENST00000278916 THOC2Q8NI27 1593 aaKnown RBP20.82■□□□□ 0.92
CHEK1-201ENST00000278916 MRC2Q9UBG0 1479 aa20.75■□□□□ 0.91
CHEK1-201ENST00000278916 URB2Q14146 1524 aaKnown RBP20.69■□□□□ 0.9
CHEK1-201ENST00000278916 WDR62O43379 1518 aa20.66■□□□□ 0.9
CHEK1-201ENST00000278916 CUX2O14529 1486 aa20.66■□□□□ 0.9
CHEK1-201ENST00000278916 TOPBP1Q92547 1522 aa20.57■□□□□ 0.88
CHEK1-201ENST00000278916 ABCC8Q09428 1581 aa20.54■□□□□ 0.88
CHEK1-201ENST00000278916 DNMBPQ6XZF7 1577 aa20.54■□□□□ 0.88
CHEK1-201ENST00000278916 CUX1P39880 1505 aa20.52■□□□□ 0.87
CHEK1-201ENST00000278916 POLA1P09884 1462 aaPredicted RBP20.42■□□□□ 0.86
CHEK1-201ENST00000278916 WRNQ14191 1432 aaPredicted RBP eCLIP20.42■□□□□ 0.86
CHEK1-201ENST00000278916 SYNJ1O43426 1573 aa20.41■□□□□ 0.86
CHEK1-201ENST00000278916 FGD5Q6ZNL6 1462 aa20.41■□□□□ 0.86
CHEK1-201ENST00000278916 RAD54L2Q9Y4B4 1467 aa20.39■□□□□ 0.85
CHEK1-201ENST00000278916 ZNF608Q9ULD9 1512 aaPredicted RBP20.36■□□□□ 0.85
CHEK1-201ENST00000278916 IFT140Q96RY7 1462 aa20.35■□□□□ 0.85
CHEK1-201ENST00000278916 TOP2BQ02880 1626 aa20.33■□□□□ 0.85
CHEK1-201ENST00000278916 SOGA1O94964 1423 aa20.33■□□□□ 0.84
CHEK1-201ENST00000278916 TARBP1Q13395 1621 aaKnown RBP20.32■□□□□ 0.84
CHEK1-201ENST00000278916 BIVM-ERCC5R4GMW8 1640 aa20.32■□□□□ 0.84
CHEK1-201ENST00000278916 AQRO60306 1485 aaKnown RBP eCLIP20.26■□□□□ 0.831e-7■■■■■ 30.9
CHEK1-201ENST00000278916 TDRD9Q8NDG6 1382 aaKnown RBP20.25■□□□□ 0.83
CHEK1-201ENST00000278916 EIF4G3O43432 1585 aaKnown RBP20.24■□□□□ 0.83
CHEK1-201ENST00000278916 WDR97A6NE52 1622 aa20.2■□□□□ 0.82
CHEK1-201ENST00000278916 ABCA10Q8WWZ4 1543 aa20.16■□□□□ 0.82
CHEK1-201ENST00000278916 TRIM41Q8WV44 630 aa20.1■□□□□ 0.81
CHEK1-201ENST00000278916 GAPVD1Q14C86 1478 aa20.09■□□□□ 0.81
CHEK1-201ENST00000278916 ABCA5Q8WWZ7 1642 aa20.09■□□□□ 0.81
CHEK1-201ENST00000278916 PBRM1Q86U86 1689 aa20.06■□□□□ 0.8
CHEK1-201ENST00000278916 SNAPC4Q5SXM2 1469 aa20.06■□□□□ 0.8
CHEK1-201ENST00000278916 GRIN2BQ13224 1484 aa20.04■□□□□ 0.8
CHEK1-201ENST00000278916 FBLN2P98095 1184 aa20.02■□□□□ 0.8
CHEK1-201ENST00000278916 CHIC1Q5VXU3 224 aa19.99■□□□□ 0.79
CHEK1-201ENST00000278916 CHD1O14646 1710 aa19.97■□□□□ 0.79
CHEK1-201ENST00000278916 RUSC2Q8N2Y8 1516 aa19.95■□□□□ 0.78
CHEK1-201ENST00000278916 KIF27Q86VH2 1401 aa19.95■□□□□ 0.78
CHEK1-201ENST00000278916 MAGI1Q96QZ7 1491 aaPredicted RBP19.94■□□□□ 0.78
CHEK1-201ENST00000278916 CHMP7Q8WUX9 453 aaPredicted RBP19.91■□□□□ 0.78
CHEK1-201ENST00000278916 ERICH3Q5RHP9 1530 aa19.9■□□□□ 0.78
CHEK1-201ENST00000278916 ADAMTS12P58397 1594 aa19.89■□□□□ 0.78
CHEK1-201ENST00000278916 OSCARQ8IYS5 282 aa19.89■□□□□ 0.77
CHEK1-201ENST00000278916 SYNJ2O15056 1496 aa19.89■□□□□ 0.77
CHEK1-201ENST00000278916 IGF1RP08069 1367 aa19.87■□□□□ 0.77
CHEK1-201ENST00000278916 DNAJC5Q9H3Z4 198 aa19.87■□□□□ 0.77
CHEK1-201ENST00000278916 FHAD1B1AJZ9 1412 aa19.83■□□□□ 0.77
CHEK1-201ENST00000278916 FAM9AQ8IZU1 332 aaPredicted RBP19.81■□□□□ 0.76
CHEK1-201ENST00000278916 GRIN2AQ12879 1464 aa19.81■□□□□ 0.76
CHEK1-201ENST00000278916 CUL7Q14999 1698 aa19.76■□□□□ 0.75
CHEK1-201ENST00000278916 CARMIL1Q5VZK9 1371 aa19.76■□□□□ 0.75
CHEK1-201ENST00000278916 CEP170Q5SW79 1584 aa19.73■□□□□ 0.75
CHEK1-201ENST00000278916 CLASP1Q7Z460 1538 aa19.69■□□□□ 0.74
CHEK1-201ENST00000278916 NUP160Q12769 1436 aa19.68■□□□□ 0.74
CHEK1-201ENST00000278916 CSRNP3Q8WYN3 585 aa19.66■□□□□ 0.74
CHEK1-201ENST00000278916 RAPGEF2Q9Y4G8 1499 aa19.65■□□□□ 0.74
CHEK1-201ENST00000278916 EHMT2Q96KQ7 1210 aa19.65■□□□□ 0.74
CHEK1-201ENST00000278916 EEA1Q15075 1411 aa19.62■□□□□ 0.73
CHEK1-201ENST00000278916 PRXQ9BXM0 1461 aa19.61■□□□□ 0.73
CHEK1-201ENST00000278916 RIMBP3CA6NJZ7 1639 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms