RNA–Protein interactions for RNA: ENST00000538271.1

PRKAB1-204, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 4

Gene PRKAB1, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-204ENST00000538271 AEBP2Q6ZN18 517 aaPredicted RBP28.2■■■□□ 2.1
PRKAB1-204ENST00000538271 CHIC1Q5VXU3 224 aa26.61■■□□□ 1.85
PRKAB1-204ENST00000538271 NISCHQ9Y2I1 1504 aa25.4■■□□□ 1.66
PRKAB1-204ENST00000538271 ABCC9O60706 1549 aa24.71■■□□□ 1.55
PRKAB1-204ENST00000538271 DNAJC5BQ9UF47 199 aa24.42■■□□□ 1.5
PRKAB1-204ENST00000538271 SENP3Q9H4L4 574 aaPredicted RBP24.34■■□□□ 1.49
PRKAB1-204ENST00000538271 PHF23Q9BUL5 403 aaPredicted RBP23.84■■□□□ 1.41
PRKAB1-204ENST00000538271 DNAJC5Q9H3Z4 198 aa23.4■■□□□ 1.34
PRKAB1-204ENST00000538271 CCDC180Q9P1Z9 1646 aa23.37■■□□□ 1.33
PRKAB1-204ENST00000538271 RB1CC1Q8TDY2 1594 aa22.9■■□□□ 1.26
PRKAB1-204ENST00000538271 PABPN1Q86U42 306 aaKnown RBP eCLIP22.8■■□□□ 1.24
PRKAB1-204ENST00000538271 FOXD1Q16676 465 aa22.54■■□□□ 1.2
PRKAB1-204ENST00000538271 UNC13AQ9UPW8 1703 aa22.43■■□□□ 1.18
PRKAB1-204ENST00000538271 NACADO15069 1562 aa22.42■■□□□ 1.18
PRKAB1-204ENST00000538271 CECR2Q9BXF3 1484 aa22.4■■□□□ 1.18
PRKAB1-204ENST00000538271 BICRAQ9NZM4 1560 aa22.32■■□□□ 1.16
PRKAB1-204ENST00000538271 CC2D2AQ9P2K1 1620 aa22.26■■□□□ 1.15
PRKAB1-204ENST00000538271 DCAF8L2P0C7V8 631 aa22.02■■□□□ 1.12
PRKAB1-204ENST00000538271 EIF4G1Q04637 1599 aaKnown RBP21.87■■□□□ 1.09
PRKAB1-204ENST00000538271 CUX2O14529 1486 aa21.84■■□□□ 1.09
PRKAB1-204ENST00000538271 SHROOM4Q9ULL8 1493 aa21.83■■□□□ 1.09
PRKAB1-204ENST00000538271 TRIM41Q8WV44 630 aa21.79■■□□□ 1.08
PRKAB1-204ENST00000538271 MYO15BQ96JP2 1530 aa21.66■■□□□ 1.06
PRKAB1-204ENST00000538271 MSH5O43196 834 aa21.49■■□□□ 1.03
PRKAB1-204ENST00000538271 POTEDQ86YR6 584 aa21.46■■□□□ 1.03
PRKAB1-204ENST00000538271 ERCC6Q03468 1493 aa21.41■■□□□ 1.02
PRKAB1-204ENST00000538271 SCRIBQ14160 1630 aa21.23■□□□□ 0.99
PRKAB1-204ENST00000538271 PLPPR3Q6T4P5 718 aa21.15■□□□□ 0.98
PRKAB1-204ENST00000538271 PIAS4Q8N2W9 510 aaPredicted RBP21.07■□□□□ 0.96
PRKAB1-204ENST00000538271 PPP6R1Q9UPN7 881 aa20.95■□□□□ 0.94
PRKAB1-204ENST00000538271 THOC2Q8NI27 1593 aaKnown RBP20.9■□□□□ 0.94
PRKAB1-204ENST00000538271 DCAF1Q9Y4B6 1507 aa20.89■□□□□ 0.94
PRKAB1-204ENST00000538271 ADRA2BP18089 450 aa20.86■□□□□ 0.93
PRKAB1-204ENST00000538271 NESP48681 1621 aa20.85■□□□□ 0.93
PRKAB1-204ENST00000538271 ZCCHC6Q5VYS8 1495 aaKnown RBP20.75■□□□□ 0.91
PRKAB1-204ENST00000538271 NCAPD3P42695 1498 aa20.73■□□□□ 0.91
PRKAB1-204ENST00000538271 SMARCA2P51531 1590 aa20.63■□□□□ 0.89
PRKAB1-204ENST00000538271 OSCARQ8IYS5 282 aa20.63■□□□□ 0.89
PRKAB1-204ENST00000538271 BAZ1AQ9NRL2 1556 aaPredicted RBP20.61■□□□□ 0.89
PRKAB1-204ENST00000538271 KIF21AQ7Z4S6 1674 aa20.53■□□□□ 0.88
PRKAB1-204ENST00000538271 RIMBP3CA6NJZ7 1639 aa20.52■□□□□ 0.88
PRKAB1-204ENST00000538271 RIMBP3BA6NNM3 1639 aa20.52■□□□□ 0.88
PRKAB1-204ENST00000538271 RIMBP3Q9UFD9 1639 aa20.52■□□□□ 0.88
PRKAB1-204ENST00000538271 ATAD2BQ9ULI0 1458 aa20.48■□□□□ 0.87
PRKAB1-204ENST00000538271 LAMC3Q9Y6N6 1575 aa20.46■□□□□ 0.87
PRKAB1-204ENST00000538271 TRHP20396 242 aaPredicted RBP20.44■□□□□ 0.86
PRKAB1-204ENST00000538271 HMGXB3Q12766 1538 aa20.43■□□□□ 0.86
PRKAB1-204ENST00000538271 PDS5BQ9NTI5 1447 aa20.39■□□□□ 0.85
PRKAB1-204ENST00000538271 ARHGEF11O15085 1522 aa20.3■□□□□ 0.84
PRKAB1-204ENST00000538271 WDR62O43379 1518 aa20.3■□□□□ 0.84
PRKAB1-204ENST00000538271 MRC2Q9UBG0 1479 aa20.3■□□□□ 0.84
PRKAB1-204ENST00000538271 ILDR1Q86SU0 546 aaPredicted RBP20.25■□□□□ 0.83
PRKAB1-204ENST00000538271 CYB5RLQ6IPT4 315 aa20.24■□□□□ 0.83
PRKAB1-204ENST00000538271 BAZ1BQ9UIG0 1483 aaKnown RBP20.18■□□□□ 0.82
PRKAB1-204ENST00000538271 SMARCA4P51532 1647 aa20.11■□□□□ 0.81
PRKAB1-204ENST00000538271 CADPSQ9ULU8 1353 aa20.03■□□□□ 0.8
PRKAB1-204ENST00000538271 ARAP1Q96P48 1450 aa20.02■□□□□ 0.8
PRKAB1-204ENST00000538271 CEP164Q9UPV0 1460 aa19.94■□□□□ 0.78
PRKAB1-204ENST00000538271 PEG3Q9GZU2 1588 aa19.92■□□□□ 0.78
PRKAB1-204ENST00000538271 FANCD2Q9BXW9 1451 aa19.8■□□□□ 0.76
PRKAB1-204ENST00000538271 URB2Q14146 1524 aaKnown RBP19.74■□□□□ 0.75
PRKAB1-204ENST00000538271 RSF1Q96T23 1441 aaPredicted RBP19.74■□□□□ 0.75
PRKAB1-204ENST00000538271 ZNF608Q9ULD9 1512 aaPredicted RBP19.72■□□□□ 0.75
PRKAB1-204ENST00000538271 CHD1O14646 1710 aa19.65■□□□□ 0.74
PRKAB1-204ENST00000538271 IFT140Q96RY7 1462 aa19.6■□□□□ 0.73
PRKAB1-204ENST00000538271 MROH2BQ7Z745 1585 aa19.57■□□□□ 0.72
PRKAB1-204ENST00000538271 EIF4G3O43432 1585 aaKnown RBP19.53■□□□□ 0.72
PRKAB1-204ENST00000538271 CFTRP13569 1480 aa19.52■□□□□ 0.72
PRKAB1-204ENST00000538271 FBLN2P98095 1184 aa19.5■□□□□ 0.71
PRKAB1-204ENST00000538271 KDM4FA0A1W2PPD8 638 aa19.46■□□□□ 0.71
PRKAB1-204ENST00000538271 CLASP1Q7Z460 1538 aa19.39■□□□□ 0.69
PRKAB1-204ENST00000538271 AQRO60306 1485 aaKnown RBP eCLIP19.37■□□□□ 0.69
PRKAB1-204ENST00000538271 GAPVD1Q14C86 1478 aa19.29■□□□□ 0.68
PRKAB1-204ENST00000538271 TOPBP1Q92547 1522 aa19.28■□□□□ 0.68
PRKAB1-204ENST00000538271 WIZO95785 1651 aa19.27■□□□□ 0.68
PRKAB1-204ENST00000538271 KIF13AQ9H1H9 1805 aa19.25■□□□□ 0.67
PRKAB1-204ENST00000538271 SYNJ1O43426 1573 aa19.23■□□□□ 0.67
PRKAB1-204ENST00000538271 ERCC6L2Q5T890 1561 aa19.23■□□□□ 0.67
PRKAB1-204ENST00000538271 FBXO41Q8TF61 875 aa19.23■□□□□ 0.67
PRKAB1-204ENST00000538271 SCAF1Q9H7N4 1312 aaKnown RBP19.23■□□□□ 0.67
PRKAB1-204ENST00000538271 TARBP1Q13395 1621 aaKnown RBP19.22■□□□□ 0.67
PRKAB1-204ENST00000538271 MAPK8IP2Q13387 824 aaPredicted RBP19.22■□□□□ 0.67
PRKAB1-204ENST00000538271 PRDM2Q13029 1718 aa19.21■□□□□ 0.67
PRKAB1-204ENST00000538271 DMRT2Q9Y5R5 561 aa19.15■□□□□ 0.66
PRKAB1-204ENST00000538271 LMTK3Q96Q04 1460 aa19.15■□□□□ 0.66
PRKAB1-204ENST00000538271 HECW2Q9P2P5 1572 aa19.15■□□□□ 0.66
PRKAB1-204ENST00000538271 CHMP7Q8WUX9 453 aaPredicted RBP19.13■□□□□ 0.65
PRKAB1-204ENST00000538271 ABCC8Q09428 1581 aa19.13■□□□□ 0.65
PRKAB1-204ENST00000538271 SNAPC4Q5SXM2 1469 aa19.12■□□□□ 0.65
PRKAB1-204ENST00000538271 DNMBPQ6XZF7 1577 aa19.08■□□□□ 0.65
PRKAB1-204ENST00000538271 SOCS7O14512 581 aa19.04■□□□□ 0.64
PRKAB1-204ENST00000538271 TDRD9Q8NDG6 1382 aaKnown RBP19.03■□□□□ 0.64
PRKAB1-204ENST00000538271 KDM6BO15054 1643 aa19.03■□□□□ 0.64
PRKAB1-204ENST00000538271 POLA1P09884 1462 aaPredicted RBP19■□□□□ 0.63
PRKAB1-204ENST00000538271 MAGI1Q96QZ7 1491 aaPredicted RBP19■□□□□ 0.63
PRKAB1-204ENST00000538271 FAM69CQ0P6D2 419 aa18.97■□□□□ 0.63
PRKAB1-204ENST00000538271 SYNJ2O15056 1496 aa18.97■□□□□ 0.63
PRKAB1-204ENST00000538271 RAD54L2Q9Y4B4 1467 aa18.97■□□□□ 0.63
PRKAB1-204ENST00000538271 ADGRL1O94910 1474 aa18.96■□□□□ 0.63
PRKAB1-204ENST00000538271 ILDR2Q71H61 639 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 108.6 ms