Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 ZNF827-201ENST00000379448 4197 ntAPPRIS P3 TSL 2 BASIC10.84□□□□□ -0.674e-6■■■■■ 34.8
XRN2Q9H0D6 PTK2-223ENST00000520828 574 ntTSL 410.21□□□□□ -0.773e-7■■■■■ 34.8
XRN2Q9H0D6 PTK2-205ENST00000517453 571 ntTSL 49.26□□□□□ -0.933e-7■■■■■ 34.8
XRN2Q9H0D6 PTK2-242ENST00000523067 488 ntTSL 48.89□□□□□ -0.993e-7■■■■■ 34.8
XRN2Q9H0D6 PTK2-249ENST00000523679 504 ntTSL 38.48□□□□□ -1.053e-7■■■■■ 34.8
XRN2Q9H0D6 ZNF827-203ENST00000508784 7463 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.14e-6■■■■■ 34.8
XRN2Q9H0D6 PTK2-240ENST00000522684 4955 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.213e-7■■■■■ 34.8
XRN2Q9H0D6 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.33e-7■■■■■ 34.8
XRN2Q9H0D6 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC6.88□□□□□ -1.313e-7■■■■■ 34.8
XRN2Q9H0D6 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.81e-16■■■■■ 34.8
XRN2Q9H0D6 SRC-211ENST00000497734 446 ntTSL 1 (best)14.3□□□□□ -0.122e-6■■■■■ 34.8
XRN2Q9H0D6 LRRC8D-205ENST00000525774 588 ntTSL 428.57■■■□□ 2.163e-7■■■■■ 34.8
XRN2Q9H0D6 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.653e-7■■■■■ 34.8
XRN2Q9H0D6 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.223e-7■■■■■ 34.8
XRN2Q9H0D6 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.98■□□□□ 0.476e-8■■■■■ 34.7
XRN2Q9H0D6 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.28■□□□□ 0.366e-8■■■■■ 34.7
XRN2Q9H0D6 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.266e-8■■■■■ 34.7
XRN2Q9H0D6 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC18.06■□□□□ 0.482e-12■■■■■ 34.7
XRN2Q9H0D6 PLEKHA7-202ENST00000355661 4980 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.192e-12■■■■■ 34.7
XRN2Q9H0D6 PLEKHA7-211ENST00000531066 4561 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.482e-12■■■■■ 34.7
XRN2Q9H0D6 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.633e-9■■■■■ 34.7
XRN2Q9H0D6 SH3BP1-202ENST00000417536 2858 ntTSL 218.66■□□□□ 0.583e-9■■■■■ 34.7
XRN2Q9H0D6 TOP3B-206ENST00000436282 2890 ntTSL 214.49□□□□□ -0.093e-9■■■■■ 34.7
XRN2Q9H0D6 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.163e-9■■■■■ 34.7
XRN2Q9H0D6 TOP3B-202ENST00000398793 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.193e-9■■■■■ 34.7
XRN2Q9H0D6 TOP3B-213ENST00000457179 3061 ntTSL 513.55□□□□□ -0.243e-9■■■■■ 34.7
XRN2Q9H0D6 TOP3B-214ENST00000457270 2956 ntTSL 513.18□□□□□ -0.33e-9■■■■■ 34.7
XRN2Q9H0D6 SH3BP1-206ENST00000469947 2612 ntTSL 212.82□□□□□ -0.363e-9■■■■■ 34.7
XRN2Q9H0D6 SH3BP1-203ENST00000451997 3123 ntTSL 211.93□□□□□ -0.53e-9■■■■■ 34.7
XRN2Q9H0D6 TOP3B-210ENST00000444502 4163 ntTSL 210.86□□□□□ -0.673e-9■■■■■ 34.7
XRN2Q9H0D6 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.624e-33■■■■■ 34.6
XRN2Q9H0D6 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.134e-6■■■■■ 34.6
XRN2Q9H0D6 ATXN1-205ENST00000479680 568 ntTSL 47.38□□□□□ -1.233e-14■■■■■ 34.6
XRN2Q9H0D6 POLR2H-209ENST00000460083 439 ntTSL 318.98■□□□□ 0.631e-12■■■■■ 34.4
XRN2Q9H0D6 MPP5-203ENST00000554911 363 ntTSL 332.22■■■□□ 2.751e-8■■■■■ 34.4
XRN2Q9H0D6 SIRT1-205ENST00000473922 576 ntTSL 427.68■■■□□ 2.024e-16■■■■■ 34.4
XRN2Q9H0D6 GPCPD1-206ENST00000481690 819 ntTSL 326.69■■□□□ 1.861e-8■■■■■ 34.4
XRN2Q9H0D6 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC26.4■■□□□ 1.821e-8■■■■■ 34.4
XRN2Q9H0D6 UBE2E1-207ENST00000475680 1138 ntTSL 526.2■■□□□ 1.781e-8■■■■■ 34.4
XRN2Q9H0D6 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC24.62■■□□□ 1.531e-8■■■■■ 34.4
XRN2Q9H0D6 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC24.23■■□□□ 1.471e-8■■■■■ 34.4
XRN2Q9H0D6 MPP5-207ENST00000557783 567 ntTSL 423.94■■□□□ 1.421e-8■■■■■ 34.4
XRN2Q9H0D6 MPP5-206ENST00000557237 479 ntTSL 423.58■■□□□ 1.371e-8■■■■■ 34.4
XRN2Q9H0D6 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.51e-8■■■■■ 34.4
XRN2Q9H0D6 TRIM11-203ENST00000475775 693 ntTSL 218.04■□□□□ 0.481e-8■■■■■ 34.4
XRN2Q9H0D6 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC17.9■□□□□ 0.465e-9■■■■■ 34.4
XRN2Q9H0D6 MPP5-202ENST00000554208 2458 ntTSL 217.77■□□□□ 0.441e-8■■■■■ 34.4
XRN2Q9H0D6 UBE2E1-204ENST00000442670 622 ntTSL 217.48■□□□□ 0.391e-8■■■■■ 34.4
XRN2Q9H0D6 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.31e-8■■■■■ 34.4
XRN2Q9H0D6 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.294e-16■■■■■ 34.4
XRN2Q9H0D6 Z84485.1-201ENST00000526611 587 ntTSL 316.46■□□□□ 0.235e-9■■■■■ 34.4
XRN2Q9H0D6 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC13.72□□□□□ -0.211e-8■■■■■ 34.4
XRN2Q9H0D6 UBE2W-201ENST00000419880 2315 ntTSL 1 (best) BASIC13.59□□□□□ -0.231e-8■■■■■ 34.4
XRN2Q9H0D6 MIR6742-201ENST00000622338 62 ntBASIC12.23□□□□□ -0.451e-8■■■■■ 34.4
XRN2Q9H0D6 UBE2W-204ENST00000519255 575 ntTSL 411.49□□□□□ -0.571e-8■■■■■ 34.4
XRN2Q9H0D6 SIRT1-204ENST00000432464 3587 ntTSL 5 BASIC11.39□□□□□ -0.594e-16■■■■■ 34.4
XRN2Q9H0D6 SIRT1-206ENST00000497639 673 ntTSL 510.98□□□□□ -0.654e-16■■■■■ 34.4
XRN2Q9H0D6 UBE2E1-203ENST00000424381 1224 ntTSL 2 BASIC10.49□□□□□ -0.731e-8■■■■■ 34.4
XRN2Q9H0D6 UBE2E1-206ENST00000467766 585 ntTSL 2 BASIC10.49□□□□□ -0.731e-8■■■■■ 34.4
XRN2Q9H0D6 GS1-600G8.3-201ENST00000431486 2249 ntTSL 1 (best) BASIC10.34□□□□□ -0.751e-8■■■■■ 34.4
XRN2Q9H0D6 GPCPD1-201ENST00000379019 5489 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.151e-8■■■■■ 34.4
XRN2Q9H0D6 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC6.56□□□□□ -1.361e-8■■■■■ 34.4
XRN2Q9H0D6 TNPO1-205ENST00000506528 422 ntTSL 54.9□□□□□ -1.631e-8■■■■■ 34.4
XRN2Q9H0D6 TNPO1-207ENST00000509030 490 ntTSL 54.9□□□□□ -1.631e-8■■■■■ 34.4
XRN2Q9H0D6 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.671e-8■■■■■ 34.4
XRN2Q9H0D6 UBE2W-205ENST00000519277 747 ntTSL 34.46□□□□□ -1.71e-8■■■■■ 34.4
XRN2Q9H0D6 TNPO1-208ENST00000511754 433 ntTSL 53.53□□□□□ -1.841e-8■■■■■ 34.4
XRN2Q9H0D6 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.44□□□□□ -1.861e-8■■■■■ 34.4
XRN2Q9H0D6 UBE2W-202ENST00000422906 3903 ntTSL 1 (best)2.64□□□□□ -1.991e-8■■■■■ 34.4
XRN2Q9H0D6 NAMPT-209ENST00000484527 833 ntTSL 315.79■□□□□ 0.124e-7■■■■■ 34.4
XRN2Q9H0D6 ARHGDIA-216ENST00000584397 622 ntTSL 228.86■■■□□ 2.211e-13■■■■■ 34.3
XRN2Q9H0D6 ARHGDIA-213ENST00000583499 560 ntTSL 228.04■■■□□ 2.081e-13■■■■■ 34.3
XRN2Q9H0D6 MVD-203ENST00000562651 908 ntTSL 223.94■■□□□ 1.422e-8■■■■■ 34.3
XRN2Q9H0D6 HSPBP1-204ENST00000585927 666 ntTSL 530.51■■■□□ 2.475e-6■■■■■ 34.2
XRN2Q9H0D6 NT5C3B-212ENST00000495317 836 ntTSL 526.85■■□□□ 1.893e-11■■■■■ 34.2
XRN2Q9H0D6 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC26.32■■□□□ 1.82e-7■■■■■ 34.2
XRN2Q9H0D6 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.85e-6■■■■■ 34.2
XRN2Q9H0D6 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.755e-6■■■■■ 34.2
XRN2Q9H0D6 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.715e-6■■■■■ 34.2
XRN2Q9H0D6 SQSTM1-210ENST00000506042 921 ntTSL 225.71■■□□□ 1.713e-6■■■■■ 34.2
XRN2Q9H0D6 NT5C3B-216ENST00000523903 1534 ntTSL 1 (best)25.65■■□□□ 1.73e-11■■■■■ 34.2
XRN2Q9H0D6 NT5C3B-204ENST00000445655 922 ntTSL 225.5■■□□□ 1.673e-11■■■■■ 34.2
XRN2Q9H0D6 NT5C3B-208ENST00000475053 675 ntTSL 325.5■■□□□ 1.673e-11■■■■■ 34.2
XRN2Q9H0D6 NT5C3B-209ENST00000476921 1081 ntTSL 325.25■■□□□ 1.633e-11■■■■■ 34.2
XRN2Q9H0D6 NT5C3B-201ENST00000393910 1253 ntTSL 225.25■■□□□ 1.633e-11■■■■■ 34.2
XRN2Q9H0D6 NT5C3B-207ENST00000470690 1729 ntTSL 524.92■■□□□ 1.583e-11■■■■■ 34.2
XRN2Q9H0D6 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.545e-6■■■■■ 34.2
XRN2Q9H0D6 GTPBP1-202ENST00000418601 810 ntTSL 224.47■■□□□ 1.512e-7■■■■■ 34.2
XRN2Q9H0D6 NT5C3B-205ENST00000460893 964 ntTSL 324.29■■□□□ 1.483e-11■■■■■ 34.2
XRN2Q9H0D6 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.433e-11■■■■■ 34.2
XRN2Q9H0D6 PKP3-204ENST00000526971 532 ntTSL 223.02■■□□□ 1.285e-6■■■■■ 34.2
XRN2Q9H0D6 NT5C3B-206ENST00000469698 1573 ntTSL 322.16■■□□□ 1.143e-11■■■■■ 34.2
XRN2Q9H0D6 NT5C3B-202ENST00000415460 730 ntTSL 521.72■■□□□ 1.073e-11■■■■■ 34.2
XRN2Q9H0D6 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC20.8■□□□□ 0.923e-11■■■■■ 34.2
XRN2Q9H0D6 AHCTF1-205ENST00000478568 611 ntTSL 419.97■□□□□ 0.793e-11■■■■■ 34.2
XRN2Q9H0D6 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.384e-9■■■■■ 34.2
XRN2Q9H0D6 AC107871.1-203ENST00000637054 3238 ntTSL 516.93■□□□□ 0.38e-8■■■■■ 34.2
XRN2Q9H0D6 AC107871.1-201ENST00000637888 2941 ntTSL 516.69■□□□□ 0.268e-8■■■■■ 34.2
XRN2Q9H0D6 SPPL3-204ENST00000536996 763 ntTSL 516.56■□□□□ 0.245e-6■■■■■ 34.2
XRN2Q9H0D6 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.228e-8■■■■■ 34.2
Retrieved 100 of 21,068 protein–RNA pairs in 494.7 ms