RNA–Protein interactions for RNA: ENST00000509030.5

TNPO1-207, Transcript of transportin 1, humanhuman

TSL 5

Gene TNPO1, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-207ENST00000509030 AEBP2Q6ZN18 517 aaPredicted RBP22.26■■□□□ 1.15
TNPO1-207ENST00000509030 CHIC1Q5VXU3 224 aa22.07■■□□□ 1.12
TNPO1-207ENST00000509030 PHF23Q9BUL5 403 aaPredicted RBP19.23■□□□□ 0.67
TNPO1-207ENST00000509030 SENP3Q9H4L4 574 aaPredicted RBP19.2■□□□□ 0.66
TNPO1-207ENST00000509030 PLPPR3Q6T4P5 718 aa18.11■□□□□ 0.49
TNPO1-207ENST00000509030 FOXD1Q16676 465 aa17.59■□□□□ 0.41
TNPO1-207ENST00000509030 POTEDQ86YR6 584 aa17.15■□□□□ 0.34
TNPO1-207ENST00000509030 ADRA2BP18089 450 aa16.99■□□□□ 0.31
TNPO1-207ENST00000509030 PPP6R1Q9UPN7 881 aa16.91■□□□□ 0.3
TNPO1-207ENST00000509030 PIAS4Q8N2W9 510 aaPredicted RBP16.76■□□□□ 0.27
TNPO1-207ENST00000509030 MSH5O43196 834 aa16.43■□□□□ 0.22
TNPO1-207ENST00000509030 SCAF1Q9H7N4 1312 aaKnown RBP15.91■□□□□ 0.14
TNPO1-207ENST00000509030 PPP4R3CPQ6ZMV5 832 aa15.87■□□□□ 0.13
TNPO1-207ENST00000509030 NCBP3Q53F19 620 aaKnown RBP15.72■□□□□ 0.11
TNPO1-207ENST00000509030 KCNA4P22459 653 aa15.54■□□□□ 0.08
TNPO1-207ENST00000509030 CNKSR2Q8WXI2 1034 aa15.49■□□□□ 0.07
TNPO1-207ENST00000509030 MAPK8IP2Q13387 824 aaPredicted RBP15.31■□□□□ 0.04
TNPO1-207ENST00000509030 DMRT2Q9Y5R5 561 aa15.26■□□□□ 0.03
TNPO1-207ENST00000509030 NPM3O75607 178 aaKnown RBP15.21■□□□□ 0.03
TNPO1-207ENST00000509030 RNF216Q9NWF9 866 aaPredicted RBP15.13■□□□□ 0.01
TNPO1-207ENST00000509030 SLC4A1APQ9BWU0 796 aaKnown RBP14.98□□□□□ -0.01
TNPO1-207ENST00000509030 HOXD11P31277 338 aaPredicted RBP14.97□□□□□ -0.01
TNPO1-207ENST00000509030 DNAJC5BQ9UF47 199 aa14.84□□□□□ -0.03
TNPO1-207ENST00000509030 DCAF8L1A6NGE4 600 aa14.69□□□□□ -0.06
TNPO1-207ENST00000509030 EHMT2Q96KQ7 1210 aa14.62□□□□□ -0.07
TNPO1-207ENST00000509030 CACNB1Q02641 598 aaPredicted RBP14.47□□□□□ -0.09
TNPO1-207ENST00000509030 FOXD4L1Q9NU39 408 aa14.43□□□□□ -0.1
TNPO1-207ENST00000509030 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.4□□□□□ -0.12e-11■■□□□ 12.8
TNPO1-207ENST00000509030 CSRNP3Q8WYN3 585 aa14.3□□□□□ -0.12
TNPO1-207ENST00000509030 SLC4A2P04920 1241 aa14.24□□□□□ -0.13
TNPO1-207ENST00000509030 MYCNP04198 464 aaPredicted RBP14.21□□□□□ -0.13
TNPO1-207ENST00000509030 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.2□□□□□ -0.14
TNPO1-207ENST00000509030 HNRNPUL2Q1KMD3 747 aaKnown RBP14.2□□□□□ -0.14
TNPO1-207ENST00000509030 ZBTB22O15209 634 aa14.17□□□□□ -0.14
TNPO1-207ENST00000509030 APLP2Q06481 763 aa14.12□□□□□ -0.15
TNPO1-207ENST00000509030 SAMD1Q6SPF0 538 aaPredicted RBP14.08□□□□□ -0.16
TNPO1-207ENST00000509030 U3KPZ7 1027 aaPredicted RBP14□□□□□ -0.17
TNPO1-207ENST00000509030 ATXN8OSP0DMR3 200 aa13.99□□□□□ -0.17
TNPO1-207ENST00000509030 RNF39Q9H2S5 420 aa13.93□□□□□ -0.18
TNPO1-207ENST00000509030 C1QBPQ07021 282 aaKnown RBP13.91□□□□□ -0.18
TNPO1-207ENST00000509030 ZNF219Q9P2Y4 722 aaPredicted RBP13.71□□□□□ -0.21
TNPO1-207ENST00000509030 CAPN15O75808 1086 aa13.67□□□□□ -0.22
TNPO1-207ENST00000509030 TRHP20396 242 aaPredicted RBP13.59□□□□□ -0.23
TNPO1-207ENST00000509030 SPINK5Q9NQ38 1064 aaPredicted RBP13.53□□□□□ -0.24
TNPO1-207ENST00000509030 ATF5Q9Y2D1 282 aaPredicted RBP13.52□□□□□ -0.25
TNPO1-207ENST00000509030 ZBTB12Q9Y330 459 aaPredicted RBP13.4□□□□□ -0.26
TNPO1-207ENST00000509030 POLA2Q14181 598 aa13.36□□□□□ -0.27
TNPO1-207ENST00000509030 FBLN2P98095 1184 aa13.35□□□□□ -0.27
TNPO1-207ENST00000509030 POTEHQ6S545 545 aa13.33□□□□□ -0.28
TNPO1-207ENST00000509030 ABCB7O75027 752 aa13.29□□□□□ -0.28
TNPO1-207ENST00000509030 DSG3P32926 999 aa13.28□□□□□ -0.28
TNPO1-207ENST00000509030 FKBP8Q14318 412 aa13.05□□□□□ -0.32
TNPO1-207ENST00000509030 MKRN4PQ13434 485 aaPredicted RBP12.98□□□□□ -0.33
TNPO1-207ENST00000509030 SPDYE4A6NLX3 237 aa12.96□□□□□ -0.33
TNPO1-207ENST00000509030 SPDYE2BA6NHP3 402 aa12.92□□□□□ -0.34
TNPO1-207ENST00000509030 SPDYE6P0CI01 402 aa12.92□□□□□ -0.34
TNPO1-207ENST00000509030 SPDYE2Q495Y8 402 aa12.92□□□□□ -0.34
TNPO1-207ENST00000509030 RBM42Q9BTD8 480 aaKnown RBP12.91□□□□□ -0.34
TNPO1-207ENST00000509030 OSCARQ8IYS5 282 aa12.87□□□□□ -0.35
TNPO1-207ENST00000509030 ZNF692Q9BU19 519 aaPredicted RBP12.86□□□□□ -0.35
TNPO1-207ENST00000509030 FBXO3Q9UK99 471 aa12.77□□□□□ -0.37
TNPO1-207ENST00000509030 SSUH2Q9Y2M2 353 aa12.71□□□□□ -0.37
TNPO1-207ENST00000509030 AKT1S1Q96B36 256 aa12.67□□□□□ -0.38
TNPO1-207ENST00000509030 STAG3Q9UJ98 1225 aa12.65□□□□□ -0.38
TNPO1-207ENST00000509030 PABPN1Q86U42 306 aaKnown RBP eCLIP12.64□□□□□ -0.39
TNPO1-207ENST00000509030 PROM2Q8N271 834 aa12.64□□□□□ -0.39
TNPO1-207ENST00000509030 SPDYE1Q8NFV5 336 aaPredicted RBP12.54□□□□□ -0.4
TNPO1-207ENST00000509030 PLEKHG5O94827 1062 aa12.5□□□□□ -0.41
TNPO1-207ENST00000509030 REM2Q8IYK8 340 aaPredicted RBP12.45□□□□□ -0.42
TNPO1-207ENST00000509030 CLEC11AQ9Y240 323 aa12.41□□□□□ -0.42
TNPO1-207ENST00000509030 VASPP50552 380 aaPredicted RBP12.4□□□□□ -0.42
TNPO1-207ENST00000509030 PLCD3Q8N3E9 789 aa12.37□□□□□ -0.43
TNPO1-207ENST00000509030 PRR29P0C7W0 189 aa12.36□□□□□ -0.43
TNPO1-207ENST00000509030 ZBTB47Q9UFB7 747 aaPredicted RBP12.36□□□□□ -0.43
TNPO1-207ENST00000509030 MIER1Q8N108 512 aa12.33□□□□□ -0.44
TNPO1-207ENST00000509030 KLHL34Q8N239 644 aa12.28□□□□□ -0.44
TNPO1-207ENST00000509030 PITPNM1O00562 1244 aa12.27□□□□□ -0.45
TNPO1-207ENST00000509030 AMER1Q5JTC6 1135 aaPredicted RBP12.25□□□□□ -0.45
TNPO1-207ENST00000509030 CHRDL2Q6WN34 429 aa12.18□□□□□ -0.46
TNPO1-207ENST00000509030 SP7Q8TDD2 431 aaPredicted RBP12.15□□□□□ -0.46
TNPO1-207ENST00000509030 SPOCK2Q92563 424 aa12.15□□□□□ -0.46
TNPO1-207ENST00000509030 NPM1P06748 294 aaKnown RBP eCLIP12.13□□□□□ -0.47
TNPO1-207ENST00000509030 IFNLR1Q8IU57 520 aaPredicted RBP12.12□□□□□ -0.47
TNPO1-207ENST00000509030 CREBZFQ9NS37 354 aa12.06□□□□□ -0.48
TNPO1-207ENST00000509030 PRKAR2AP13861 404 aaKnown RBP12.03□□□□□ -0.48
TNPO1-207ENST00000509030 FXR2P51116 673 aaKnown RBP eCLIP12.03□□□□□ -0.484e-7■■■□□ 15.7
TNPO1-207ENST00000509030 GSE1Q14687 1217 aa11.98□□□□□ -0.49
TNPO1-207ENST00000509030 FAM212AQ96EL1 285 aa11.97□□□□□ -0.49
TNPO1-207ENST00000509030 PIP4P2Q8N4L2 257 aa11.96□□□□□ -0.49
TNPO1-207ENST00000509030 TRIM41Q8WV44 630 aa11.96□□□□□ -0.49
TNPO1-207ENST00000509030 RTN4Q9NQC3 1192 aaKnown RBP11.96□□□□□ -0.49
TNPO1-207ENST00000509030 PAK3O75914 559 aaPredicted RBP11.95□□□□□ -0.5
TNPO1-207ENST00000509030 FARP1Q9Y4F1 1045 aaPredicted RBP11.95□□□□□ -0.5
TNPO1-207ENST00000509030 CHADLQ6NUI6 762 aa11.94□□□□□ -0.5
TNPO1-207ENST00000509030 CIZ1Q9ULV3 898 aaPredicted RBP11.93□□□□□ -0.5
TNPO1-207ENST00000509030 DCAF8Q5TAQ9 597 aa11.89□□□□□ -0.51
TNPO1-207ENST00000509030 MNX1P50219 401 aaPredicted RBP11.87□□□□□ -0.51
TNPO1-207ENST00000509030 NUBP1P53384 320 aa11.85□□□□□ -0.51
TNPO1-207ENST00000509030 ECM2O94769 699 aaPredicted RBP11.83□□□□□ -0.52
TNPO1-207ENST00000509030 TAOK2Q9UL54 1235 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 368.2 ms