RNA–Protein interactions for RNA: ENST00000519255.2

UBE2W-204, Transcript of ubiquitin conjugating enzyme E2 W, humanhuman

TSL 4

Gene UBE2W, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2W-204ENST00000519255 NISCHQ9Y2I1 1504 aa23.81■■□□□ 1.4
UBE2W-204ENST00000519255 ABCC9O60706 1549 aa22.01■■□□□ 1.11
UBE2W-204ENST00000519255 CCDC180Q9P1Z9 1646 aa21.57■■□□□ 1.04
UBE2W-204ENST00000519255 DNAJC5BQ9UF47 199 aa21.12■□□□□ 0.97
UBE2W-204ENST00000519255 RB1CC1Q8TDY2 1594 aa20.66■□□□□ 0.9
UBE2W-204ENST00000519255 UNC13AQ9UPW8 1703 aa20.45■□□□□ 0.86
UBE2W-204ENST00000519255 NACADO15069 1562 aa20.41■□□□□ 0.86
UBE2W-204ENST00000519255 PABPN1Q86U42 306 aaKnown RBP eCLIP20.35■□□□□ 0.85
UBE2W-204ENST00000519255 BICRAQ9NZM4 1560 aa20.3■□□□□ 0.84
UBE2W-204ENST00000519255 DCAF8L2P0C7V8 631 aa20.01■□□□□ 0.79
UBE2W-204ENST00000519255 MYO15BQ96JP2 1530 aa19.99■□□□□ 0.79
UBE2W-204ENST00000519255 CC2D2AQ9P2K1 1620 aa19.89■□□□□ 0.77
UBE2W-204ENST00000519255 CECR2Q9BXF3 1484 aa19.81■□□□□ 0.76
UBE2W-204ENST00000519255 SHROOM4Q9ULL8 1493 aa19.73■□□□□ 0.75
UBE2W-204ENST00000519255 EIF4G1Q04637 1599 aaKnown RBP19.73■□□□□ 0.75
UBE2W-204ENST00000519255 ZCCHC6Q5VYS8 1495 aaKnown RBP19.69■□□□□ 0.74
UBE2W-204ENST00000519255 SCRIBQ14160 1630 aa19.69■□□□□ 0.74
UBE2W-204ENST00000519255 DCAF1Q9Y4B6 1507 aa19.6■□□□□ 0.73
UBE2W-204ENST00000519255 DNAJC5Q9H3Z4 198 aa19.51■□□□□ 0.71
UBE2W-204ENST00000519255 CUX2O14529 1486 aa19.06■□□□□ 0.64
UBE2W-204ENST00000519255 ERCC6Q03468 1493 aa18.88■□□□□ 0.61
UBE2W-204ENST00000519255 NCAPD3P42695 1498 aa18.87■□□□□ 0.61
UBE2W-204ENST00000519255 NESP48681 1621 aa18.86■□□□□ 0.61
UBE2W-204ENST00000519255 ATAD2BQ9ULI0 1458 aa18.8■□□□□ 0.6
UBE2W-204ENST00000519255 THOC2Q8NI27 1593 aaKnown RBP18.8■□□□□ 0.6
UBE2W-204ENST00000519255 HMGXB3Q12766 1538 aa18.74■□□□□ 0.59
UBE2W-204ENST00000519255 SMARCA4P51532 1647 aa18.72■□□□□ 0.59
UBE2W-204ENST00000519255 SMARCA2P51531 1590 aa18.64■□□□□ 0.57
UBE2W-204ENST00000519255 KIF21AQ7Z4S6 1674 aa18.61■□□□□ 0.57
UBE2W-204ENST00000519255 BAZ1BQ9UIG0 1483 aaKnown RBP18.52■□□□□ 0.56
UBE2W-204ENST00000519255 PEG3Q9GZU2 1588 aa18.52■□□□□ 0.56
UBE2W-204ENST00000519255 LAMC3Q9Y6N6 1575 aa18.51■□□□□ 0.55
UBE2W-204ENST00000519255 BAZ1AQ9NRL2 1556 aaPredicted RBP18.45■□□□□ 0.54
UBE2W-204ENST00000519255 TRIM41Q8WV44 630 aa18.43■□□□□ 0.54
UBE2W-204ENST00000519255 MROH2BQ7Z745 1585 aa18.42■□□□□ 0.54
UBE2W-204ENST00000519255 WDR62O43379 1518 aa18.34■□□□□ 0.53
UBE2W-204ENST00000519255 MRC2Q9UBG0 1479 aa18.3■□□□□ 0.52
UBE2W-204ENST00000519255 PDS5BQ9NTI5 1447 aa18.3■□□□□ 0.52
UBE2W-204ENST00000519255 CADPSQ9ULU8 1353 aa18.22■□□□□ 0.51
UBE2W-204ENST00000519255 WIZO95785 1651 aa18.18■□□□□ 0.5
UBE2W-204ENST00000519255 CEP164Q9UPV0 1460 aa18.11■□□□□ 0.49
UBE2W-204ENST00000519255 FANCD2Q9BXW9 1451 aa18.07■□□□□ 0.48
UBE2W-204ENST00000519255 URB2Q14146 1524 aaKnown RBP18.07■□□□□ 0.48
UBE2W-204ENST00000519255 RIMBP3CA6NJZ7 1639 aa18.06■□□□□ 0.48
UBE2W-204ENST00000519255 RIMBP3BA6NNM3 1639 aa18.06■□□□□ 0.48
UBE2W-204ENST00000519255 RIMBP3Q9UFD9 1639 aa18.06■□□□□ 0.48
UBE2W-204ENST00000519255 CFTRP13569 1480 aa18■□□□□ 0.47
UBE2W-204ENST00000519255 OSCARQ8IYS5 282 aa17.95■□□□□ 0.46
UBE2W-204ENST00000519255 ZNF608Q9ULD9 1512 aaPredicted RBP17.93■□□□□ 0.46
UBE2W-204ENST00000519255 ARHGEF11O15085 1522 aa17.92■□□□□ 0.46
UBE2W-204ENST00000519255 PRDM2Q13029 1718 aa17.86■□□□□ 0.45
UBE2W-204ENST00000519255 TOP2AP11388 1531 aaKnown RBP17.85■□□□□ 0.45
UBE2W-204ENST00000519255 AEBP2Q6ZN18 517 aaPredicted RBP17.85■□□□□ 0.45
UBE2W-204ENST00000519255 EIF4G3O43432 1585 aaKnown RBP17.8■□□□□ 0.44
UBE2W-204ENST00000519255 RSF1Q96T23 1441 aaPredicted RBP17.8■□□□□ 0.44
UBE2W-204ENST00000519255 CHD1O14646 1710 aa17.77■□□□□ 0.44
UBE2W-204ENST00000519255 ARAP1Q96P48 1450 aa17.76■□□□□ 0.43
UBE2W-204ENST00000519255 IFT140Q96RY7 1462 aa17.75■□□□□ 0.43
UBE2W-204ENST00000519255 TOPBP1Q92547 1522 aa17.73■□□□□ 0.43
UBE2W-204ENST00000519255 TARBP1Q13395 1621 aaKnown RBP17.69■□□□□ 0.42
UBE2W-204ENST00000519255 CCDC88BA6NC98 1476 aa17.64■□□□□ 0.41
UBE2W-204ENST00000519255 CYB5RLQ6IPT4 315 aa17.63■□□□□ 0.41
UBE2W-204ENST00000519255 AQRO60306 1485 aaKnown RBP eCLIP17.62■□□□□ 0.41
UBE2W-204ENST00000519255 DNMBPQ6XZF7 1577 aa17.62■□□□□ 0.41
UBE2W-204ENST00000519255 CLASP1Q7Z460 1538 aa17.55■□□□□ 0.4
UBE2W-204ENST00000519255 POLA1P09884 1462 aaPredicted RBP17.53■□□□□ 0.4
UBE2W-204ENST00000519255 RAD54L2Q9Y4B4 1467 aa17.5■□□□□ 0.39
UBE2W-204ENST00000519255 TRHP20396 242 aaPredicted RBP17.48■□□□□ 0.39
UBE2W-204ENST00000519255 ABCC8Q09428 1581 aa17.45■□□□□ 0.38
UBE2W-204ENST00000519255 SNAPC4Q5SXM2 1469 aa17.44■□□□□ 0.38
UBE2W-204ENST00000519255 TDRD9Q8NDG6 1382 aaKnown RBP17.4■□□□□ 0.38
UBE2W-204ENST00000519255 FBLN2P98095 1184 aa17.38■□□□□ 0.37
UBE2W-204ENST00000519255 WDR97A6NE52 1622 aa17.38■□□□□ 0.37
UBE2W-204ENST00000519255 FGD5Q6ZNL6 1462 aa17.35■□□□□ 0.37
UBE2W-204ENST00000519255 SYNJ1O43426 1573 aa17.33■□□□□ 0.37
UBE2W-204ENST00000519255 CUX1P39880 1505 aa17.33■□□□□ 0.37
UBE2W-204ENST00000519255 ERCC6L2Q5T890 1561 aa17.32■□□□□ 0.36
UBE2W-204ENST00000519255 SOGA1O94964 1423 aa17.31■□□□□ 0.36
UBE2W-204ENST00000519255 MAGI1Q96QZ7 1491 aaPredicted RBP17.3■□□□□ 0.36
UBE2W-204ENST00000519255 PBRM1Q86U86 1689 aa17.29■□□□□ 0.36
UBE2W-204ENST00000519255 GAPVD1Q14C86 1478 aa17.26■□□□□ 0.35
UBE2W-204ENST00000519255 SYNJ2O15056 1496 aa17.25■□□□□ 0.35
UBE2W-204ENST00000519255 GRIN2BQ13224 1484 aa17.24■□□□□ 0.35
UBE2W-204ENST00000519255 ABCA5Q8WWZ7 1642 aa17.22■□□□□ 0.35
UBE2W-204ENST00000519255 KIF13AQ9H1H9 1805 aa17.17■□□□□ 0.34
UBE2W-204ENST00000519255 CHMP7Q8WUX9 453 aaPredicted RBP17.16■□□□□ 0.34
UBE2W-204ENST00000519255 CEP170Q5SW79 1584 aa17.15■□□□□ 0.34
UBE2W-204ENST00000519255 ADAMTS12P58397 1594 aa17.11■□□□□ 0.33
UBE2W-204ENST00000519255 SHROOM2Q13796 1616 aa17.1■□□□□ 0.33
UBE2W-204ENST00000519255 ABCA10Q8WWZ4 1543 aa17.1■□□□□ 0.33
UBE2W-204ENST00000519255 GRIN2AQ12879 1464 aa17.08■□□□□ 0.32
UBE2W-204ENST00000519255 NUP160Q12769 1436 aa17.07■□□□□ 0.32
UBE2W-204ENST00000519255 BIVM-ERCC5R4GMW8 1640 aa16.92■□□□□ 0.3
UBE2W-204ENST00000519255 DIP2BQ9P265 1576 aa16.91■□□□□ 0.3
UBE2W-204ENST00000519255 RUSC2Q8N2Y8 1516 aa16.9■□□□□ 0.3
UBE2W-204ENST00000519255 ADCY10Q96PN6 1610 aa16.88■□□□□ 0.29
UBE2W-204ENST00000519255 FHAD1B1AJZ9 1412 aa16.87■□□□□ 0.29
UBE2W-204ENST00000519255 TOP2BQ02880 1626 aa16.87■□□□□ 0.29
UBE2W-204ENST00000519255 ABCC10Q5T3U5 1492 aa16.86■□□□□ 0.29
UBE2W-204ENST00000519255 PRG4Q92954 1404 aaPredicted RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms