RNA–Protein interactions for RNA: ENST00000475775.1

TRIM11-203, Transcript of tripartite motif containing 11, humanhuman

TSL 2

Gene TRIM11, Length 693 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-203ENST00000475775 NISCHQ9Y2I1 1504 aa36.82■■■■□ 3.48
TRIM11-203ENST00000475775 ABCC9O60706 1549 aa33.88■■■■□ 3.01
TRIM11-203ENST00000475775 CCDC180Q9P1Z9 1646 aa33.22■■■□□ 2.91
TRIM11-203ENST00000475775 DNAJC5BQ9UF47 199 aa32.4■■■□□ 2.78
TRIM11-203ENST00000475775 RB1CC1Q8TDY2 1594 aa31.94■■■□□ 2.7
TRIM11-203ENST00000475775 NACADO15069 1562 aa31.54■■■□□ 2.64
TRIM11-203ENST00000475775 PABPN1Q86U42 306 aaKnown RBP eCLIP31.44■■■□□ 2.62
TRIM11-203ENST00000475775 UNC13AQ9UPW8 1703 aa31.36■■■□□ 2.61
TRIM11-203ENST00000475775 DCAF8L2P0C7V8 631 aa31.33■■■□□ 2.61
TRIM11-203ENST00000475775 BICRAQ9NZM4 1560 aa31.05■■■□□ 2.56
TRIM11-203ENST00000475775 MYO15BQ96JP2 1530 aa30.88■■■□□ 2.53
TRIM11-203ENST00000475775 CC2D2AQ9P2K1 1620 aa30.58■■■□□ 2.49
TRIM11-203ENST00000475775 ZCCHC6Q5VYS8 1495 aaKnown RBP30.56■■■□□ 2.48
TRIM11-203ENST00000475775 CECR2Q9BXF3 1484 aa30.56■■■□□ 2.48
TRIM11-203ENST00000475775 DCAF1Q9Y4B6 1507 aa30.48■■■□□ 2.47
TRIM11-203ENST00000475775 SHROOM4Q9ULL8 1493 aa30.45■■■□□ 2.47
TRIM11-203ENST00000475775 EIF4G1Q04637 1599 aaKnown RBP30.33■■■□□ 2.45
TRIM11-203ENST00000475775 SCRIBQ14160 1630 aa30.23■■■□□ 2.43
TRIM11-203ENST00000475775 DNAJC5Q9H3Z4 198 aa30.22■■■□□ 2.43
TRIM11-203ENST00000475775 CUX2O14529 1486 aa29.42■■■□□ 2.3
TRIM11-203ENST00000475775 ERCC6Q03468 1493 aa29.28■■■□□ 2.28
TRIM11-203ENST00000475775 NCAPD3P42695 1498 aa29.11■■■□□ 2.25
TRIM11-203ENST00000475775 ATAD2BQ9ULI0 1458 aa28.93■■■□□ 2.22
TRIM11-203ENST00000475775 NESP48681 1621 aa28.91■■■□□ 2.22
TRIM11-203ENST00000475775 HMGXB3Q12766 1538 aa28.83■■■□□ 2.21
TRIM11-203ENST00000475775 SMARCA2P51531 1590 aa28.83■■■□□ 2.21
TRIM11-203ENST00000475775 SMARCA4P51532 1647 aa28.76■■■□□ 2.2
TRIM11-203ENST00000475775 THOC2Q8NI27 1593 aaKnown RBP28.74■■■□□ 2.19
TRIM11-203ENST00000475775 TRIM41Q8WV44 630 aa28.65■■■□□ 2.18
TRIM11-203ENST00000475775 BAZ1AQ9NRL2 1556 aaPredicted RBP28.64■■■□□ 2.18
TRIM11-203ENST00000475775 BAZ1BQ9UIG0 1483 aaKnown RBP28.62■■■□□ 2.17
TRIM11-203ENST00000475775 LAMC3Q9Y6N6 1575 aa28.59■■■□□ 2.17
TRIM11-203ENST00000475775 KIF21AQ7Z4S6 1674 aa28.58■■■□□ 2.17
TRIM11-203ENST00000475775 PEG3Q9GZU2 1588 aa28.47■■■□□ 2.15
TRIM11-203ENST00000475775 PDS5BQ9NTI5 1447 aa28.43■■■□□ 2.14
TRIM11-203ENST00000475775 MROH2BQ7Z745 1585 aa28.33■■■□□ 2.12
TRIM11-203ENST00000475775 MRC2Q9UBG0 1479 aa28.21■■■□□ 2.11
TRIM11-203ENST00000475775 CADPSQ9ULU8 1353 aa28.2■■■□□ 2.1
TRIM11-203ENST00000475775 WDR62O43379 1518 aa28.18■■■□□ 2.1
TRIM11-203ENST00000475775 OSCARQ8IYS5 282 aa28.02■■■□□ 2.08
TRIM11-203ENST00000475775 CEP164Q9UPV0 1460 aa27.98■■■□□ 2.07
TRIM11-203ENST00000475775 WIZO95785 1651 aa27.97■■■□□ 2.07
TRIM11-203ENST00000475775 FANCD2Q9BXW9 1451 aa27.89■■■□□ 2.05
TRIM11-203ENST00000475775 RSF1Q96T23 1441 aaPredicted RBP27.77■■■□□ 2.04
TRIM11-203ENST00000475775 RIMBP3CA6NJZ7 1639 aa27.75■■■□□ 2.03
TRIM11-203ENST00000475775 RIMBP3BA6NNM3 1639 aa27.75■■■□□ 2.03
TRIM11-203ENST00000475775 RIMBP3Q9UFD9 1639 aa27.75■■■□□ 2.03
TRIM11-203ENST00000475775 CFTRP13569 1480 aa27.73■■■□□ 2.03
TRIM11-203ENST00000475775 TOP2AP11388 1531 aaKnown RBP27.72■■■□□ 2.03
TRIM11-203ENST00000475775 URB2Q14146 1524 aaKnown RBP27.71■■■□□ 2.03
TRIM11-203ENST00000475775 ARHGEF11O15085 1522 aa27.55■■■□□ 2
TRIM11-203ENST00000475775 PRDM2Q13029 1718 aa27.53■■■□□ 2
TRIM11-203ENST00000475775 ZNF608Q9ULD9 1512 aaPredicted RBP27.48■■□□□ 1.99
TRIM11-203ENST00000475775 CYB5RLQ6IPT4 315 aa27.44■■□□□ 1.98
TRIM11-203ENST00000475775 IFT140Q96RY7 1462 aa27.44■■□□□ 1.98
TRIM11-203ENST00000475775 TRHP20396 242 aaPredicted RBP27.36■■□□□ 1.97
TRIM11-203ENST00000475775 CCDC88BA6NC98 1476 aa27.33■■□□□ 1.97
TRIM11-203ENST00000475775 CHD1O14646 1710 aa27.31■■□□□ 1.96
TRIM11-203ENST00000475775 EIF4G3O43432 1585 aaKnown RBP27.31■■□□□ 1.96
TRIM11-203ENST00000475775 TOPBP1Q92547 1522 aa27.3■■□□□ 1.96
TRIM11-203ENST00000475775 ARAP1Q96P48 1450 aa27.22■■□□□ 1.95
TRIM11-203ENST00000475775 ABCC8Q09428 1581 aa27.19■■□□□ 1.94
TRIM11-203ENST00000475775 AQRO60306 1485 aaKnown RBP eCLIP27.17■■□□□ 1.941e-7■■■■□ 21.7
TRIM11-203ENST00000475775 FBLN2P98095 1184 aa27.15■■□□□ 1.94
TRIM11-203ENST00000475775 DNMBPQ6XZF7 1577 aa27.14■■□□□ 1.93
TRIM11-203ENST00000475775 TARBP1Q13395 1621 aaKnown RBP27.13■■□□□ 1.93
TRIM11-203ENST00000475775 AEBP2Q6ZN18 517 aaPredicted RBP27.06■■□□□ 1.92
TRIM11-203ENST00000475775 POLA1P09884 1462 aaPredicted RBP26.96■■□□□ 1.91
TRIM11-203ENST00000475775 RAD54L2Q9Y4B4 1467 aa26.9■■□□□ 1.9
TRIM11-203ENST00000475775 TDRD9Q8NDG6 1382 aaKnown RBP26.88■■□□□ 1.89
TRIM11-203ENST00000475775 CLASP1Q7Z460 1538 aa26.88■■□□□ 1.89
TRIM11-203ENST00000475775 SOGA1O94964 1423 aa26.85■■□□□ 1.89
TRIM11-203ENST00000475775 SNAPC4Q5SXM2 1469 aa26.84■■□□□ 1.89
TRIM11-203ENST00000475775 CHMP7Q8WUX9 453 aaPredicted RBP26.82■■□□□ 1.88
TRIM11-203ENST00000475775 SYNJ1O43426 1573 aa26.82■■□□□ 1.88
TRIM11-203ENST00000475775 WDR97A6NE52 1622 aa26.76■■□□□ 1.87
TRIM11-203ENST00000475775 MAGI1Q96QZ7 1491 aaPredicted RBP26.73■■□□□ 1.87
TRIM11-203ENST00000475775 FGD5Q6ZNL6 1462 aa26.71■■□□□ 1.87
TRIM11-203ENST00000475775 GRIN2BQ13224 1484 aa26.67■■□□□ 1.86
TRIM11-203ENST00000475775 SYNJ2O15056 1496 aa26.66■■□□□ 1.86
TRIM11-203ENST00000475775 GAPVD1Q14C86 1478 aa26.65■■□□□ 1.86
TRIM11-203ENST00000475775 CUX1P39880 1505 aa26.62■■□□□ 1.85
TRIM11-203ENST00000475775 PBRM1Q86U86 1689 aa26.61■■□□□ 1.85
TRIM11-203ENST00000475775 SUPT5HO00267 1087 aaKnown RBP26.54■■□□□ 1.84
TRIM11-203ENST00000475775 ERCC6L2Q5T890 1561 aa26.46■■□□□ 1.83
TRIM11-203ENST00000475775 ABCA10Q8WWZ4 1543 aa26.39■■□□□ 1.82
TRIM11-203ENST00000475775 ABCA5Q8WWZ7 1642 aa26.39■■□□□ 1.82
TRIM11-203ENST00000475775 KIF13AQ9H1H9 1805 aa26.38■■□□□ 1.81
TRIM11-203ENST00000475775 CEP170Q5SW79 1584 aa26.33■■□□□ 1.81
TRIM11-203ENST00000475775 GRIN2AQ12879 1464 aa26.33■■□□□ 1.81
TRIM11-203ENST00000475775 WRNQ14191 1432 aaPredicted RBP eCLIP26.32■■□□□ 1.8
TRIM11-203ENST00000475775 TOP2BQ02880 1626 aa26.25■■□□□ 1.79
TRIM11-203ENST00000475775 SHROOM2Q13796 1616 aa26.25■■□□□ 1.79
TRIM11-203ENST00000475775 BIVM-ERCC5R4GMW8 1640 aa26.25■■□□□ 1.79
TRIM11-203ENST00000475775 NUP160Q12769 1436 aa26.24■■□□□ 1.79
TRIM11-203ENST00000475775 ADAMTS12P58397 1594 aa26.23■■□□□ 1.79
TRIM11-203ENST00000475775 FHAD1B1AJZ9 1412 aa26.12■■□□□ 1.77
TRIM11-203ENST00000475775 ERICH3Q5RHP9 1530 aa26.09■■□□□ 1.77
TRIM11-203ENST00000475775 PRG4Q92954 1404 aaPredicted RBP26.08■■□□□ 1.77
TRIM11-203ENST00000475775 FAM69CQ0P6D2 419 aa26.08■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms