RNA–Protein interactions for RNA: ENST00000422906.6

UBE2W-202, Transcript of ubiquitin conjugating enzyme E2 W, humanhuman

TSL 1 (best)

Gene UBE2W, Length 3,903 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2W-202ENST00000422906 NISCHQ9Y2I1 1504 aa7.22□□□□□ -1.25
UBE2W-202ENST00000422906 CCDC180Q9P1Z9 1646 aa7.17□□□□□ -1.26
UBE2W-202ENST00000422906 UNC13AQ9UPW8 1703 aa7.03□□□□□ -1.28
UBE2W-202ENST00000422906 BICRAQ9NZM4 1560 aa6.73□□□□□ -1.33
UBE2W-202ENST00000422906 MYO15BQ96JP2 1530 aa6.68□□□□□ -1.34
UBE2W-202ENST00000422906 SHROOM4Q9ULL8 1493 aa6.61□□□□□ -1.35
UBE2W-202ENST00000422906 AEBP2Q6ZN18 517 aaPredicted RBP6.6□□□□□ -1.35
UBE2W-202ENST00000422906 NACADO15069 1562 aa6.45□□□□□ -1.38
UBE2W-202ENST00000422906 RB1CC1Q8TDY2 1594 aa6.41□□□□□ -1.38
UBE2W-202ENST00000422906 DNAJC5BQ9UF47 199 aa6.41□□□□□ -1.38
UBE2W-202ENST00000422906 DCAF1Q9Y4B6 1507 aa6.4□□□□□ -1.38
UBE2W-202ENST00000422906 CHIC1Q5VXU3 224 aa6.36□□□□□ -1.39
UBE2W-202ENST00000422906 ABCC9O60706 1549 aa6.31□□□□□ -1.4
UBE2W-202ENST00000422906 THOC2Q8NI27 1593 aaKnown RBP6.28□□□□□ -1.4
UBE2W-202ENST00000422906 CC2D2AQ9P2K1 1620 aa6.28□□□□□ -1.4
UBE2W-202ENST00000422906 EIF4G1Q04637 1599 aaKnown RBP6.21□□□□□ -1.42
UBE2W-202ENST00000422906 DNAJC5Q9H3Z4 198 aa6.2□□□□□ -1.42
UBE2W-202ENST00000422906 PEG3Q9GZU2 1588 aa6.19□□□□□ -1.42
UBE2W-202ENST00000422906 PRDM2Q13029 1718 aa6.13□□□□□ -1.43
UBE2W-202ENST00000422906 CUX2O14529 1486 aa6.11□□□□□ -1.43
UBE2W-202ENST00000422906 ZCCHC6Q5VYS8 1495 aaKnown RBP6.08□□□□□ -1.44
UBE2W-202ENST00000422906 SCRIBQ14160 1630 aa6.05□□□□□ -1.44
UBE2W-202ENST00000422906 HMGXB3Q12766 1538 aa6.02□□□□□ -1.45
UBE2W-202ENST00000422906 KIF21AQ7Z4S6 1674 aa6.01□□□□□ -1.45
UBE2W-202ENST00000422906 SMARCA2P51531 1590 aa5.95□□□□□ -1.46
UBE2W-202ENST00000422906 WDR62O43379 1518 aa5.94□□□□□ -1.46
UBE2W-202ENST00000422906 WDR97A6NE52 1622 aa5.89□□□□□ -1.47
UBE2W-202ENST00000422906 CECR2Q9BXF3 1484 aa5.89□□□□□ -1.47
UBE2W-202ENST00000422906 LAMC3Q9Y6N6 1575 aa5.86□□□□□ -1.47
UBE2W-202ENST00000422906 NCAPD3P42695 1498 aa5.86□□□□□ -1.47
UBE2W-202ENST00000422906 POTEDQ86YR6 584 aa5.83□□□□□ -1.48
UBE2W-202ENST00000422906 SMARCA4P51532 1647 aa5.83□□□□□ -1.48
UBE2W-202ENST00000422906 RIMBP3CA6NJZ7 1639 aa5.8□□□□□ -1.48
UBE2W-202ENST00000422906 RIMBP3BA6NNM3 1639 aa5.8□□□□□ -1.48
UBE2W-202ENST00000422906 RIMBP3Q9UFD9 1639 aa5.8□□□□□ -1.48
UBE2W-202ENST00000422906 BAZ1AQ9NRL2 1556 aaPredicted RBP5.78□□□□□ -1.48
UBE2W-202ENST00000422906 KIF13AQ9H1H9 1805 aa5.77□□□□□ -1.49
UBE2W-202ENST00000422906 CLASP1Q7Z460 1538 aa5.75□□□□□ -1.49
UBE2W-202ENST00000422906 TARBP1Q13395 1621 aaKnown RBP5.74□□□□□ -1.49
UBE2W-202ENST00000422906 SHROOM2Q13796 1616 aa5.73□□□□□ -1.49
UBE2W-202ENST00000422906 CHD1O14646 1710 aa5.69□□□□□ -1.5
UBE2W-202ENST00000422906 PPRC1Q5VV67 1664 aaKnown RBP5.68□□□□□ -1.5
UBE2W-202ENST00000422906 ATAD2BQ9ULI0 1458 aa5.68□□□□□ -1.5
UBE2W-202ENST00000422906 PHF23Q9BUL5 403 aaPredicted RBP5.64□□□□□ -1.51
UBE2W-202ENST00000422906 NESP48681 1621 aa5.61□□□□□ -1.51
UBE2W-202ENST00000422906 EIF4G3O43432 1585 aaKnown RBP5.58□□□□□ -1.52
UBE2W-202ENST00000422906 PBRM1Q86U86 1689 aa5.55□□□□□ -1.52
UBE2W-202ENST00000422906 URB2Q14146 1524 aaKnown RBP5.55□□□□□ -1.52
UBE2W-202ENST00000422906 ABCA5Q8WWZ7 1642 aa5.54□□□□□ -1.52
UBE2W-202ENST00000422906 MRC2Q9UBG0 1479 aa5.53□□□□□ -1.52
UBE2W-202ENST00000422906 ARHGEF11O15085 1522 aa5.53□□□□□ -1.52
UBE2W-202ENST00000422906 ARAP1Q96P48 1450 aa5.51□□□□□ -1.53
UBE2W-202ENST00000422906 CFTRP13569 1480 aa5.5□□□□□ -1.53
UBE2W-202ENST00000422906 MROH2BQ7Z745 1585 aa5.47□□□□□ -1.53
UBE2W-202ENST00000422906 WIZO95785 1651 aa5.47□□□□□ -1.53
UBE2W-202ENST00000422906 SENP3Q9H4L4 574 aaPredicted RBP5.43□□□□□ -1.54
UBE2W-202ENST00000422906 RSF1Q96T23 1441 aaPredicted RBP5.43□□□□□ -1.54
UBE2W-202ENST00000422906 TOP2AP11388 1531 aaKnown RBP5.42□□□□□ -1.54
UBE2W-202ENST00000422906 MAP3K4Q9Y6R4 1608 aa5.42□□□□□ -1.54
UBE2W-202ENST00000422906 DNMBPQ6XZF7 1577 aa5.41□□□□□ -1.54
UBE2W-202ENST00000422906 BIVM-ERCC5R4GMW8 1640 aa5.41□□□□□ -1.54
UBE2W-202ENST00000422906 DIP2BQ9P265 1576 aa5.39□□□□□ -1.55
UBE2W-202ENST00000422906 MAPKBP1O60336 1514 aa5.39□□□□□ -1.55
UBE2W-202ENST00000422906 SIGLEC1Q9BZZ2 1709 aa5.39□□□□□ -1.55
UBE2W-202ENST00000422906 PABPN1Q86U42 306 aaKnown RBP eCLIP5.39□□□□□ -1.55
UBE2W-202ENST00000422906 ERCC6L2Q5T890 1561 aa5.38□□□□□ -1.55
UBE2W-202ENST00000422906 KDM6BO15054 1643 aa5.38□□□□□ -1.55
UBE2W-202ENST00000422906 GLI2P10070 1586 aa5.37□□□□□ -1.55
UBE2W-202ENST00000422906 RUSC2Q8N2Y8 1516 aa5.35□□□□□ -1.55
UBE2W-202ENST00000422906 CEP170Q5SW79 1584 aa5.35□□□□□ -1.55
UBE2W-202ENST00000422906 ADCY10Q96PN6 1610 aa5.34□□□□□ -1.55
UBE2W-202ENST00000422906 ADAMTS12P58397 1594 aa5.34□□□□□ -1.56
UBE2W-202ENST00000422906 ZNF608Q9ULD9 1512 aaPredicted RBP5.32□□□□□ -1.56
UBE2W-202ENST00000422906 ADAMTSL3P82987 1691 aa5.31□□□□□ -1.56
UBE2W-202ENST00000422906 BAZ1BQ9UIG0 1483 aaKnown RBP5.31□□□□□ -1.56
UBE2W-202ENST00000422906 TOPBP1Q92547 1522 aa5.31□□□□□ -1.56
UBE2W-202ENST00000422906 IFT140Q96RY7 1462 aa5.31□□□□□ -1.56
UBE2W-202ENST00000422906 TOP2BQ02880 1626 aa5.3□□□□□ -1.56
UBE2W-202ENST00000422906 CADPSQ9ULU8 1353 aa5.29□□□□□ -1.56
UBE2W-202ENST00000422906 FANCD2Q9BXW9 1451 aa5.27□□□□□ -1.57
UBE2W-202ENST00000422906 CEP164Q9UPV0 1460 aa5.27□□□□□ -1.57
UBE2W-202ENST00000422906 FRMPD1Q5SYB0 1578 aa5.27□□□□□ -1.57
UBE2W-202ENST00000422906 NUP160Q12769 1436 aa5.26□□□□□ -1.57
UBE2W-202ENST00000422906 PDS5BQ9NTI5 1447 aa5.25□□□□□ -1.57
UBE2W-202ENST00000422906 KDM5BQ9UGL1 1544 aa5.24□□□□□ -1.57
UBE2W-202ENST00000422906 FER1L4A9Z1Z3 1794 aa5.23□□□□□ -1.57
UBE2W-202ENST00000422906 MAGI1Q96QZ7 1491 aaPredicted RBP5.23□□□□□ -1.57
UBE2W-202ENST00000422906 ERCC6Q03468 1493 aa5.22□□□□□ -1.57
UBE2W-202ENST00000422906 SYNJ1O43426 1573 aa5.22□□□□□ -1.57
UBE2W-202ENST00000422906 CUX1P39880 1505 aa5.22□□□□□ -1.57
UBE2W-202ENST00000422906 STRCQ7RTU9 1775 aa5.21□□□□□ -1.58
UBE2W-202ENST00000422906 POLA1P09884 1462 aaPredicted RBP5.2□□□□□ -1.58
UBE2W-202ENST00000422906 ABCC8Q09428 1581 aa5.19□□□□□ -1.58
UBE2W-202ENST00000422906 ABCA10Q8WWZ4 1543 aa5.18□□□□□ -1.58
UBE2W-202ENST00000422906 HECW2Q9P2P5 1572 aa5.18□□□□□ -1.58
UBE2W-202ENST00000422906 RICTORQ6R327 1708 aa5.17□□□□□ -1.58
UBE2W-202ENST00000422906 ALKQ9UM73 1620 aa5.17□□□□□ -1.58
UBE2W-202ENST00000422906 BCORL1Q5H9F3 1711 aa5.15□□□□□ -1.58
UBE2W-202ENST00000422906 CFAP43Q8NDM7 1665 aa5.15□□□□□ -1.58
UBE2W-202ENST00000422906 ERICH3Q5RHP9 1530 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms